RNA–Protein interactions for RNA: YJR055W

HIT1, Transcript of Protein involved in C/D snoRNP assembly, yeastyeast

Gene HIT1, Length 495 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HIT1YJR055W CCC2P38995 1004 aa4.07□□□□□ -1.76
HIT1YJR055W NPP2P39997 493 aa4.07□□□□□ -1.76
HIT1YJR055W PSP2P50109 593 aaKnown RBP4.07□□□□□ -1.76
HIT1YJR055W NCS6P53088 359 aa4.07□□□□□ -1.76
HIT1YJR055W ESC2Q06340 456 aa4.07□□□□□ -1.76
HIT1YJR055W ENB1Q08299 606 aa4.07□□□□□ -1.76
HIT1YJR055W BUL1P48524 976 aa4.06□□□□□ -1.76
HIT1YJR055W WHI4Q07655 649 aaKnown RBP4.06□□□□□ -1.76
HIT1YJR055W KAR4P25583 335 aa4.05□□□□□ -1.76
HIT1YJR055W PIN4P34217 668 aaKnown RBP RIP-Chip data4.05□□□□□ -1.76not detected
HIT1YJR055W SAH1P39954 449 aaKnown RBP4.05□□□□□ -1.76
HIT1YJR055W YGR053CP53234 283 aa4.05□□□□□ -1.76
HIT1YJR055W ABD1P32783 436 aaPredicted RBP4.04□□□□□ -1.76
HIT1YJR055W ATG19P35193 415 aa4.04□□□□□ -1.76
HIT1YJR055W SNF7P39929 240 aaKnown RBP4.04□□□□□ -1.76
HIT1YJR055W SFB2P53953 876 aa4.04□□□□□ -1.76
HIT1YJR055W YLR040CQ07988 224 aa4.04□□□□□ -1.76
HIT1YJR055W EFT1P32324 842 aaKnown RBP4.03□□□□□ -1.76
HIT1YJR055W CDC12P32468 407 aaKnown RBP4.03□□□□□ -1.76
HIT1YJR055W FAA4P47912 694 aaKnown RBP4.03□□□□□ -1.76
HIT1YJR055W YML122CQ03207 126 aa4.03□□□□□ -1.76
HIT1YJR055W GUP2Q08929 609 aa4.03□□□□□ -1.76
HIT1YJR055W MBP1P39678 833 aa4.02□□□□□ -1.77
HIT1YJR055W UBA2P52488 636 aa4.02□□□□□ -1.77
HIT1YJR055W YOL073CQ08232 322 aa4.02□□□□□ -1.77
HIT1YJR055W UPC2Q12151 913 aa4.02□□□□□ -1.77
HIT1YJR055W RPC82P32349 654 aa4.01□□□□□ -1.77
HIT1YJR055W SRP1Q02821 542 aaKnown RBP4.01□□□□□ -1.77
HIT1YJR055W CAD1P24813 409 aaKnown RBP4□□□□□ -1.77
HIT1YJR055W STE14P32584 239 aa4□□□□□ -1.77
HIT1YJR055W KTR4P38131 464 aa4□□□□□ -1.77
HIT1YJR055W SUL1P38359 859 aa4□□□□□ -1.77
HIT1YJR055W GYP7P48365 746 aa4□□□□□ -1.77
HIT1YJR055W GDE1Q02979 1223 aa4□□□□□ -1.77
HIT1YJR055W ERG4P25340 473 aa3.99□□□□□ -1.77
HIT1YJR055W AGP1P25376 633 aa3.99□□□□□ -1.77
HIT1YJR055W SBA1P28707 216 aaKnown RBP3.99□□□□□ -1.77
HIT1YJR055W NPL3Q01560 414 aaKnown RBP RIP-Chip data3.99□□□□□ -1.77not detected
HIT1YJR055W DUS3Q06053 668 aaKnown RBP3.99□□□□□ -1.77
HIT1YJR055W TRP4P07285 380 aaPredicted RBP3.98□□□□□ -1.77
HIT1YJR055W YER158CP40095 573 aa3.98□□□□□ -1.77
HIT1YJR055W RAI1P53063 387 aaKnown RBP3.98□□□□□ -1.77
HIT1YJR055W SLU7Q02775 382 aaKnown RBP3.98□□□□□ -1.77
HIT1YJR055W SED4P25365 1065 aa3.97□□□□□ -1.77
HIT1YJR055W YKR078WP36158 585 aaKnown RBP3.97□□□□□ -1.77
HIT1YJR055W TSL1P38427 1098 aaKnown RBP3.97□□□□□ -1.77
HIT1YJR055W KRI1P42846 591 aaKnown RBP3.97□□□□□ -1.77
HIT1YJR055W GUS1P46655 708 aaKnown RBP RIP-Chip data3.97□□□□□ -1.77not detected
HIT1YJR055W TMN2Q04562 672 aa3.97□□□□□ -1.77
HIT1YJR055W YPR196WQ06595 470 aa3.97□□□□□ -1.77
HIT1YJR055W FAL1Q12099 399 aaKnown RBP3.97□□□□□ -1.77
HIT1YJR055W STB4P50104 949 aa3.96□□□□□ -1.78
HIT1YJR055W YKE2P52553 114 aa3.96□□□□□ -1.78
HIT1YJR055W OMS1Q06668 471 aa3.96□□□□□ -1.78
HIT1YJR055W MCH5Q08777 521 aa3.96□□□□□ -1.78
HIT1YJR055W TRM13Q12383 476 aa3.96□□□□□ -1.78
HIT1YJR055W NPP1P25353 742 aa3.95□□□□□ -1.78
HIT1YJR055W VBA5P36172 582 aa3.95□□□□□ -1.78
HIT1YJR055W YBR238CP38330 731 aaKnown RBP3.95□□□□□ -1.78
HIT1YJR055W QRI1P43123 477 aaKnown RBP3.95□□□□□ -1.78
HIT1YJR055W ERG5P54781 538 aa3.95□□□□□ -1.78
HIT1YJR055W YMR206WQ03695 313 aa3.95□□□□□ -1.78
HIT1YJR055W NOT3P06102 836 aaKnown RBP3.94□□□□□ -1.78
HIT1YJR055W CDC48P25694 835 aaKnown RBP3.94□□□□□ -1.78
HIT1YJR055W AFR1P33304 620 aa3.94□□□□□ -1.78
HIT1YJR055W RNT1Q02555 471 aa3.94□□□□□ -1.78
HIT1YJR055W SSL1Q04673 461 aaPredicted RBP3.94□□□□□ -1.78
HIT1YJR055W YDR306CQ06640 478 aa3.94□□□□□ -1.78
HIT1YJR055W ACF2Q12168 779 aa3.94□□□□□ -1.78
HIT1YJR055W PPR1P07272 904 aaPredicted RBP3.93□□□□□ -1.78
HIT1YJR055W CLN2P20438 545 aa3.93□□□□□ -1.78
HIT1YJR055W STE13P33894 931 aa3.93□□□□□ -1.78
HIT1YJR055W YKL069WP36088 180 aa3.93□□□□□ -1.78
HIT1YJR055W STU2P46675 888 aa3.93□□□□□ -1.78
HIT1YJR055W MUK1Q02866 612 aa3.93□□□□□ -1.78
HIT1YJR055W SHE9Q04172 456 aa3.93□□□□□ -1.78
HIT1YJR055W TAF7Q05021 590 aa3.93□□□□□ -1.78
HIT1YJR055W PIN2Q12057 282 aa3.93□□□□□ -1.78
HIT1YJR055W ALG7P07286 448 aa3.92□□□□□ -1.78
HIT1YJR055W FBP1P09201 348 aa3.92□□□□□ -1.78
HIT1YJR055W SEC21P32074 935 aaKnown RBP3.92□□□□□ -1.78
HIT1YJR055W PPH3P32345 308 aa3.92□□□□□ -1.78
HIT1YJR055W CWC24P53769 259 aa3.92□□□□□ -1.78
HIT1YJR055W VPS16Q03308 798 aa3.92□□□□□ -1.78
HIT1YJR055W IRC10Q08118 586 aa3.92□□□□□ -1.78
HIT1YJR055W OPI10Q08202 246 aa3.92□□□□□ -1.78
HIT1YJR055W TIM44Q01852 431 aa3.91□□□□□ -1.78
HIT1YJR055W PEX19Q07418 342 aa3.91□□□□□ -1.78
HIT1YJR055W PRI2P20457 528 aa3.9□□□□□ -1.79
HIT1YJR055W RPD3P32561 433 aa3.9□□□□□ -1.79
HIT1YJR055W MTH1P35198 433 aa3.9□□□□□ -1.79
HIT1YJR055W ATF1P40353 525 aa3.9□□□□□ -1.79
HIT1YJR055W SDP1P40479 209 aa3.9□□□□□ -1.79
HIT1YJR055W MAD1P40957 749 aa3.9□□□□□ -1.79
HIT1YJR055W ADE8P04161 214 aa3.89□□□□□ -1.79
HIT1YJR055W AAR2P32357 355 aaPredicted RBP3.89□□□□□ -1.79
HIT1YJR055W CTF13P35203 478 aa3.89□□□□□ -1.79
HIT1YJR055W YRO2P38079 344 aa3.89□□□□□ -1.79
HIT1YJR055W SIT1P39980 628 aa3.89□□□□□ -1.79
HIT1YJR055W GND2P53319 492 aa3.89□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 33.8 ms