RNA–Protein interactions for RNA: YIL093C

RSM25, Transcript of Mitochondrial ribosomal protein of the small subunit, yeast

Gene RSM25, Length 795 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSM25	YIL093C	TFB2	Q02939	513 aa		4.57	□□□□□ -1.68
RSM25	YIL093C	SND1	Q04007	877 aa		4.57	□□□□□ -1.68
RSM25	YIL093C	GNT1	Q12096	491 aa		4.57	□□□□□ -1.68
RSM25	YIL093C	NUP145	P49687	1317 aa		4.56	□□□□□ -1.68
RSM25	YIL093C	RPL11A	P0C0W9	174 aa	Known RBP	4.56	□□□□□ -1.68
RSM25	YIL093C	MPH2	P0CD99	609 aa		4.56	□□□□□ -1.68
RSM25	YIL093C	SST2	P11972	698 aa	Known RBP	4.56	□□□□□ -1.68
RSM25	YIL093C	YEF3	P16521	1044 aa	Known RBP	4.56	□□□□□ -1.68
RSM25	YIL093C	OPI1	P21957	404 aa		4.56	□□□□□ -1.68
RSM25	YIL093C	YSC84	P32793	468 aa		4.56	□□□□□ -1.68
RSM25	YIL093C	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.56	□□□□□ -1.68	not detected
RSM25	YIL093C	YKL151C	P36059	337 aa		4.56	□□□□□ -1.68
RSM25	YIL093C	JNM1	P36224	373 aa		4.56	□□□□□ -1.68
RSM25	YIL093C	PEX7	P39108	375 aa		4.56	□□□□□ -1.68
RSM25	YIL093C	GPP1	P41277	250 aa	Known RBP	4.56	□□□□□ -1.68
RSM25	YIL093C	COG6	P53959	839 aa		4.56	□□□□□ -1.68
RSM25	YIL093C	TGL2	P54857	326 aa		4.56	□□□□□ -1.68
RSM25	YIL093C	RPL11B	Q3E757	174 aa	Predicted RBP	4.56	□□□□□ -1.68
RSM25	YIL093C	DAL5	P15365	543 aa		4.55	□□□□□ -1.68
RSM25	YIL093C	SSH4	P32343	579 aa		4.55	□□□□□ -1.68
RSM25	YIL093C	MRS6	P32864	603 aa	Known RBP	4.55	□□□□□ -1.68
RSM25	YIL093C	PTH2	P34222	208 aa		4.55	□□□□□ -1.68
RSM25	YIL093C	MRP8	P35719	219 aa		4.55	□□□□□ -1.68
RSM25	YIL093C	YKL222C	P35995	705 aa		4.55	□□□□□ -1.68
RSM25	YIL093C	BAP2	P38084	609 aa		4.55	□□□□□ -1.68
RSM25	YIL093C	RPN3	P40016	523 aa	Known RBP	4.55	□□□□□ -1.68
RSM25	YIL093C	IRR1	P40541	1150 aa		4.55	□□□□□ -1.68
RSM25	YIL093C	FAF1	P40546	346 aa	Predicted RBP	4.55	□□□□□ -1.68
RSM25	YIL093C	MMM1	P41800	426 aa		4.55	□□□□□ -1.68
RSM25	YIL093C	OYE3	P41816	400 aa	Predicted RBP	4.55	□□□□□ -1.68
RSM25	YIL093C	SRB7	P47822	140 aa		4.55	□□□□□ -1.68
RSM25	YIL093C	SPC105	P53148	917 aa		4.55	□□□□□ -1.68
RSM25	YIL093C	ERP6	P53198	216 aa		4.55	□□□□□ -1.68
RSM25	YIL093C	RCM1	P53972	490 aa		4.55	□□□□□ -1.68
RSM25	YIL093C	MEH1	Q02205	184 aa		4.55	□□□□□ -1.68
RSM25	YIL093C	HOS3	Q02959	697 aa	Known RBP	4.55	□□□□□ -1.68
RSM25	YIL093C	PSR2	Q07949	397 aa		4.55	□□□□□ -1.68
RSM25	YIL093C	HRK1	Q08732	759 aa	Known RBP	4.55	□□□□□ -1.68
RSM25	YIL093C	TRP3	P00937	484 aa		4.54	□□□□□ -1.68
RSM25	YIL093C	GCD1	P09032	578 aa	Predicted RBP	4.54	□□□□□ -1.68
RSM25	YIL093C	SBP1	P10080	294 aa	Known RBP	4.54	□□□□□ -1.68
RSM25	YIL093C	COQ2	P32378	372 aa		4.54	□□□□□ -1.68
RSM25	YIL093C	PEX6	P33760	1030 aa		4.54	□□□□□ -1.68
RSM25	YIL093C	YBR071W	P38243	211 aa		4.54	□□□□□ -1.68
RSM25	YIL093C	PBY1	P38254	753 aa		4.54	□□□□□ -1.68
RSM25	YIL093C	GEM1	P39722	662 aa		4.54	□□□□□ -1.68
RSM25	YIL093C	CIT3	P43635	486 aa		4.54	□□□□□ -1.68
RSM25	YIL093C	PIP2	P52960	996 aa		4.54	□□□□□ -1.68
RSM25	YIL093C	RTA1	P53047	317 aa		4.54	□□□□□ -1.68
RSM25	YIL093C	GPG1	P53130	126 aa		4.54	□□□□□ -1.68
RSM25	YIL093C	UTP8	P53276	713 aa	Known RBP	4.54	□□□□□ -1.68
RSM25	YIL093C	ALO1	P54783	526 aa	Known RBP	4.54	□□□□□ -1.68
RSM25	YIL093C	UME1	Q03010	460 aa		4.54	□□□□□ -1.68
RSM25	YIL093C	TAF8	Q03750	510 aa		4.54	□□□□□ -1.68
RSM25	YIL093C	SPP382	Q06411	708 aa	Predicted RBP	4.54	□□□□□ -1.68
RSM25	YIL093C	FOB1	O13329	566 aa		4.53	□□□□□ -1.68
RSM25	YIL093C	MSB1	P21339	1137 aa	Known RBP	4.53	□□□□□ -1.68
RSM25	YIL093C	HBS1	P32769	611 aa	Known RBP	4.53	□□□□□ -1.68
RSM25	YIL093C	SLA2	P33338	968 aa		4.53	□□□□□ -1.68
RSM25	YIL093C	TFC3	P34111	1160 aa		4.53	□□□□□ -1.68
RSM25	YIL093C	HUL4	P40985	892 aa		4.53	□□□□□ -1.68
RSM25	YIL093C	LSB3	P43603	459 aa	Known RBP	4.53	□□□□□ -1.68
RSM25	YIL093C	PEX14	P53112	341 aa		4.53	□□□□□ -1.68
RSM25	YIL093C	YGR130C	P53278	816 aa		4.53	□□□□□ -1.68
RSM25	YIL093C	TNA1	P53322	534 aa		4.53	□□□□□ -1.68
RSM25	YIL093C	YNL193W	P53870	558 aa		4.53	□□□□□ -1.68
RSM25	YIL093C	THI73	Q07904	523 aa		4.53	□□□□□ -1.68
RSM25	YIL093C	PSK2	Q08217	1101 aa		4.53	□□□□□ -1.68
RSM25	YIL093C	CHS2	P14180	963 aa		4.52	□□□□□ -1.69
RSM25	YIL093C	EUG1	P32474	517 aa		4.52	□□□□□ -1.69
RSM25	YIL093C	SWI3	P32591	825 aa		4.52	□□□□□ -1.69
RSM25	YIL093C	KAE1	P36132	386 aa		4.52	□□□□□ -1.69
RSM25	YIL093C	MUM2	P38236	366 aa		4.52	□□□□□ -1.69
RSM25	YIL093C	YAP1801	P38856	637 aa		4.52	□□□□□ -1.69
RSM25	YIL093C	MAL11	P53048	616 aa		4.52	□□□□□ -1.69
RSM25	YIL093C	MTC3	P53077	123 aa		4.52	□□□□□ -1.69
RSM25	YIL093C	YNL034W	P53963	612 aa		4.52	□□□□□ -1.69
RSM25	YIL093C	YNL018C	P53976	612 aa		4.52	□□□□□ -1.69
RSM25	YIL093C	MET14	Q02196	202 aa		4.52	□□□□□ -1.69
RSM25	YIL093C	TRE2	Q08693	809 aa		4.52	□□□□□ -1.69
RSM25	YIL093C	RRP6	Q12149	733 aa	Known RBP	4.52	□□□□□ -1.69
RSM25	YIL093C	MPD2	Q99316	277 aa		4.52	□□□□□ -1.69
RSM25	YIL093C	INH1	P01097	85 aa		4.51	□□□□□ -1.69
RSM25	YIL093C	ARE1	P25628	610 aa		4.51	□□□□□ -1.69
RSM25	YIL093C	RRN3	P36070	627 aa		4.51	□□□□□ -1.69
RSM25	YIL093C	YKR073C	P36153	106 aa		4.51	□□□□□ -1.69
RSM25	YIL093C	ABZ1	P37254	787 aa	Predicted RBP	4.51	□□□□□ -1.69
RSM25	YIL093C	EXO84	P38261	753 aa		4.51	□□□□□ -1.69
RSM25	YIL093C	YHL012W	P38709	493 aa		4.51	□□□□□ -1.69
RSM25	YIL093C	GDH3	P39708	457 aa		4.51	□□□□□ -1.69
RSM25	YIL093C	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.51	□□□□□ -1.69	not detected
RSM25	YIL093C	PAP2	P53632	584 aa	Known RBP	4.51	□□□□□ -1.69
RSM25	YIL093C	HRQ1	Q05549	1077 aa		4.51	□□□□□ -1.69
RSM25	YIL093C	YLR001C	Q07895	862 aa		4.51	□□□□□ -1.69
RSM25	YIL093C	TRE1	Q08919	783 aa		4.51	□□□□□ -1.69
RSM25	YIL093C	FAP7	Q12055	197 aa	Predicted RBP	4.51	□□□□□ -1.69
RSM25	YIL093C	CDC31	P06704	161 aa	Known RBP	4.5	□□□□□ -1.69
RSM25	YIL093C	PTP2	P29461	750 aa		4.5	□□□□□ -1.69
RSM25	YIL093C	PLC1	P32383	869 aa		4.5	□□□□□ -1.69
RSM25	YIL093C	BET3	P36149	193 aa		4.5	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 50.1 ms