RNA–Protein interactions for RNA: YDR006C

SOK1, Transcript of Protein of unknown function, yeastyeast

Gene SOK1, Length 2,706 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SOK1YDR006C SPO71Q03868 1245 aa3.29□□□□□ -1.88
SOK1YDR006C MTQ2Q03920 221 aaPredicted RBP3.29□□□□□ -1.88
SOK1YDR006C YDR444WQ04093 687 aa3.29□□□□□ -1.88
SOK1YDR006C PHM6Q05637 104 aa3.29□□□□□ -1.88
SOK1YDR006C YLR345WQ06137 509 aa3.29□□□□□ -1.88
SOK1YDR006C CYB2P00175 591 aa3.29□□□□□ -1.88
SOK1YDR006C DED1P06634 604 aaKnown RBP3.29□□□□□ -1.88
SOK1YDR006C KAR2P16474 682 aaKnown RBP3.29□□□□□ -1.88
SOK1YDR006C LRP1P38801 184 aaKnown RBP3.29□□□□□ -1.88
SOK1YDR006C YTA6P40328 754 aa3.29□□□□□ -1.88
SOK1YDR006C UGO1Q03327 502 aa3.29□□□□□ -1.88
SOK1YDR006C YDR131CQ03899 556 aa3.29□□□□□ -1.88
SOK1YDR006C RRP6Q12149 733 aaKnown RBP3.29□□□□□ -1.88
SOK1YDR006C CLF1Q12309 687 aaPredicted RBP3.29□□□□□ -1.88
SOK1YDR006C OSH2Q12451 1283 aa3.29□□□□□ -1.88
SOK1YDR006C INO1P11986 533 aa3.28□□□□□ -1.88
SOK1YDR006C GFA1P14742 717 aaKnown RBP3.28□□□□□ -1.88
SOK1YDR006C NUP120P35729 1037 aa3.28□□□□□ -1.88
SOK1YDR006C BCD1P38772 366 aa3.28□□□□□ -1.88
SOK1YDR006C IRR1P40541 1150 aa3.28□□□□□ -1.88
SOK1YDR006C MNT3P40549 630 aa3.28□□□□□ -1.88
SOK1YDR006C UTP8P53276 713 aaKnown RBP3.28□□□□□ -1.88
SOK1YDR006C UME1Q03010 460 aa3.28□□□□□ -1.88
SOK1YDR006C HBN1Q96VH4 193 aa3.28□□□□□ -1.88
SOK1YDR006C BRF1P29056 596 aa3.28□□□□□ -1.88
SOK1YDR006C MET22P32179 357 aa3.28□□□□□ -1.88
SOK1YDR006C GDH3P39708 457 aa3.28□□□□□ -1.88
SOK1YDR006C YJL055WP47044 245 aa3.28□□□□□ -1.88
SOK1YDR006C TY1A-DR2Q03964 440 aaKnown RBP3.28□□□□□ -1.88
SOK1YDR006C VTI1Q04338 217 aa3.28□□□□□ -1.88
SOK1YDR006C SOG2Q08817 791 aa3.28□□□□□ -1.88
SOK1YDR006C DPH6Q12429 685 aa3.28□□□□□ -1.88
SOK1YDR006C ISN1Q99312 450 aa3.28□□□□□ -1.88
SOK1YDR006C CAF20P12962 161 aaKnown RBP3.28□□□□□ -1.89
SOK1YDR006C RAD51P25454 400 aa3.28□□□□□ -1.89
SOK1YDR006C SBA1P28707 216 aaKnown RBP3.28□□□□□ -1.89
SOK1YDR006C YGL176CP46945 554 aa3.28□□□□□ -1.89
SOK1YDR006C MDE1P47095 244 aa3.28□□□□□ -1.89
SOK1YDR006C SGM1P47166 707 aa3.28□□□□□ -1.89
SOK1YDR006C PEX14P53112 341 aa3.28□□□□□ -1.89
SOK1YDR006C RRT6P53117 311 aaPredicted RBP3.28□□□□□ -1.89
SOK1YDR006C CUZ1P53899 274 aa3.28□□□□□ -1.89
SOK1YDR006C EAF1Q06337 982 aa3.28□□□□□ -1.89
SOK1YDR006C AVO1Q08236 1176 aa3.28□□□□□ -1.89
SOK1YDR006C RVB2Q12464 471 aaKnown RBP3.28□□□□□ -1.89
SOK1YDR006C RRP43P25359 394 aaPredicted RBP3.27□□□□□ -1.89
SOK1YDR006C YKL151CP36059 337 aa3.27□□□□□ -1.89
SOK1YDR006C TRZ1P36159 838 aaPredicted RBP3.27□□□□□ -1.89
SOK1YDR006C CAJ1P39101 391 aa3.27□□□□□ -1.89
SOK1YDR006C IMA5P40884 581 aa3.27□□□□□ -1.89
SOK1YDR006C SPO74P45819 413 aa3.27□□□□□ -1.89
SOK1YDR006C LSC2P53312 427 aa3.27□□□□□ -1.89
SOK1YDR006C NPL3Q01560 414 aaKnown RBP RIP-Chip data3.27□□□□□ -1.89not detected
SOK1YDR006C SRP1Q02821 542 aaKnown RBP3.27□□□□□ -1.89
SOK1YDR006C HEH2Q03281 663 aa3.27□□□□□ -1.89
SOK1YDR006C TMA46Q12000 345 aaKnown RBP3.27□□□□□ -1.89
SOK1YDR006C YOR131CQ12486 218 aa3.27□□□□□ -1.89
SOK1YDR006C RED1P14291 827 aa3.27□□□□□ -1.89
SOK1YDR006C PRP9P19736 530 aaKnown RBP3.27□□□□□ -1.89
SOK1YDR006C SER1P33330 395 aaKnown RBP3.27□□□□□ -1.89
SOK1YDR006C SQT1P35184 431 aa3.27□□□□□ -1.89
SOK1YDR006C SRB7P47822 140 aa3.27□□□□□ -1.89
SOK1YDR006C ALO1P54783 526 aaKnown RBP3.27□□□□□ -1.89
SOK1YDR006C YLR346CQ06139 101 aa3.27□□□□□ -1.89
SOK1YDR006C SMD2Q06217 110 aaKnown RBP3.27□□□□□ -1.89
SOK1YDR006C YIG1Q08956 461 aa3.27□□□□□ -1.89
SOK1YDR006C HSP42Q12329 375 aa3.27□□□□□ -1.89
SOK1YDR006C YBR284WP38150 797 aa3.26□□□□□ -1.89
SOK1YDR006C NCL1P38205 684 aaKnown RBP3.26□□□□□ -1.89
SOK1YDR006C QRI7P43122 407 aa3.26□□□□□ -1.89
SOK1YDR006C ROG3P43602 733 aa3.26□□□□□ -1.89
SOK1YDR006C IRC6P43615 237 aa3.26□□□□□ -1.89
SOK1YDR006C DAS1P47005 663 aa3.26□□□□□ -1.89
SOK1YDR006C MET13P53128 600 aa3.26□□□□□ -1.89
SOK1YDR006C ALF1P53904 254 aa3.26□□□□□ -1.89
SOK1YDR006C PRO2P54885 456 aaKnown RBP3.26□□□□□ -1.89
SOK1YDR006C SXM1Q04175 944 aaKnown RBP3.26□□□□□ -1.89
SOK1YDR006C RSC58Q07979 502 aa3.26□□□□□ -1.89
SOK1YDR006C CPA2P03965 1118 aaKnown RBP3.26□□□□□ -1.89
SOK1YDR006C HSP60P19882 572 aaKnown RBP3.26□□□□□ -1.89
SOK1YDR006C SAN1P22470 610 aa3.26□□□□□ -1.89
SOK1YDR006C SYP1P25623 870 aaKnown RBP3.26□□□□□ -1.89
SOK1YDR006C RAD16P31244 790 aa3.26□□□□□ -1.89
SOK1YDR006C HEM12P32347 362 aaPredicted RBP3.26□□□□□ -1.89
SOK1YDR006C TFB1P32776 642 aa3.26□□□□□ -1.89
SOK1YDR006C CAB3P36076 571 aa3.26□□□□□ -1.89
SOK1YDR006C ACA1P39970 489 aa3.26□□□□□ -1.89
SOK1YDR006C NPP2P39997 493 aa3.26□□□□□ -1.89
SOK1YDR006C RTT105P40063 208 aa3.26□□□□□ -1.89
SOK1YDR006C ALR2P43553 858 aa3.26□□□□□ -1.89
SOK1YDR006C UBA2P52488 636 aa3.26□□□□□ -1.89
SOK1YDR006C PBP1P53297 722 aaKnown RBP3.26□□□□□ -1.89
SOK1YDR006C ARC35P53731 342 aaKnown RBP3.26□□□□□ -1.89
SOK1YDR006C TIM10P87108 93 aa3.26□□□□□ -1.89
SOK1YDR006C FDC1Q03034 503 aa3.26□□□□□ -1.89
SOK1YDR006C HEL2Q05580 639 aaKnown RBP3.26□□□□□ -1.89
SOK1YDR006C EST2Q06163 884 aa3.26□□□□□ -1.89
SOK1YDR006C SPN1Q06505 410 aaPredicted RBP3.26□□□□□ -1.89
SOK1YDR006C NBA1Q08229 501 aaKnown RBP3.26□□□□□ -1.89
SOK1YDR006C NEW1Q08972 1196 aaKnown RBP3.26□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms