RNA–Protein interactions for RNA: YBR106W

PHO88, Transcript of Probable membrane protein, yeastyeast

Gene PHO88, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PHO88YBR106W YJL045WP47052 634 aa4.3□□□□□ -1.72
PHO88YBR106W JSN1P47135 1091 aaKnown RBP RIP-Chip data4.3□□□□□ -1.72not detected
PHO88YBR106W NOG2P53742 486 aaKnown RBP4.3□□□□□ -1.72
PHO88YBR106W ALO1P54783 526 aaKnown RBP4.3□□□□□ -1.72
PHO88YBR106W SNP1Q00916 300 aaPredicted RBP4.3□□□□□ -1.72
PHO88YBR106W VPS72Q03388 795 aa4.3□□□□□ -1.72
PHO88YBR106W YLR001CQ07895 862 aa4.3□□□□□ -1.72
PHO88YBR106W MDM38Q08179 573 aa4.3□□□□□ -1.72
PHO88YBR106W TRE2Q08693 809 aa4.3□□□□□ -1.72
PHO88YBR106W ENP1P38333 483 aaKnown RBP4.29□□□□□ -1.72
PHO88YBR106W CKB2P38930 258 aa4.29□□□□□ -1.72
PHO88YBR106W GPB2P39717 880 aa4.29□□□□□ -1.72
PHO88YBR106W YER158CP40095 573 aa4.29□□□□□ -1.72
PHO88YBR106W TOK1P40310 691 aa4.29□□□□□ -1.72
PHO88YBR106W DUG1P43616 481 aaKnown RBP4.29□□□□□ -1.72
PHO88YBR106W YGR035CP53222 116 aa4.29□□□□□ -1.72
PHO88YBR106W YNR014WP53719 212 aa4.29□□□□□ -1.72
PHO88YBR106W YOL057WQ08225 711 aa4.29□□□□□ -1.72
PHO88YBR106W YTM1Q12024 460 aaPredicted RBP4.29□□□□□ -1.72
PHO88YBR106W OSW2Q12202 724 aa4.29□□□□□ -1.72
PHO88YBR106W TMA17Q12513 150 aa4.29□□□□□ -1.72
PHO88YBR106W CDC9P04819 755 aa4.28□□□□□ -1.72
PHO88YBR106W RPP2AP05319 106 aaKnown RBP4.28□□□□□ -1.72
PHO88YBR106W SNF5P18480 905 aa4.28□□□□□ -1.72
PHO88YBR106W SFL1P20134 766 aa4.28□□□□□ -1.72
PHO88YBR106W RFA1P22336 621 aaKnown RBP4.28□□□□□ -1.72
PHO88YBR106W PWP2P25635 923 aaKnown RBP4.28□□□□□ -1.72
PHO88YBR106W HOG1P32485 435 aa4.28□□□□□ -1.72
PHO88YBR106W TRZ1P36159 838 aaPredicted RBP4.28□□□□□ -1.72
PHO88YBR106W YHL012WP38709 493 aa4.28□□□□□ -1.72
PHO88YBR106W MMM1P41800 426 aa4.28□□□□□ -1.72
PHO88YBR106W GYP8P43570 497 aa4.28□□□□□ -1.72
PHO88YBR106W CIT3P43635 486 aa4.28□□□□□ -1.72
PHO88YBR106W PAP2P53632 584 aaKnown RBP4.28□□□□□ -1.72
PHO88YBR106W BUL2Q03758 920 aaKnown RBP4.28□□□□□ -1.72
PHO88YBR106W YPR196WQ06595 470 aa4.28□□□□□ -1.72
PHO88YBR106W RSC3Q06639 885 aa4.28□□□□□ -1.72
PHO88YBR106W GUD1Q07729 489 aa4.28□□□□□ -1.72
PHO88YBR106W SLX4Q12098 748 aa4.28□□□□□ -1.72
PHO88YBR106W GIN4Q12263 1142 aa4.28□□□□□ -1.72
PHO88YBR106W AI3P03877 415 aa4.27□□□□□ -1.73
PHO88YBR106W KIN2P13186 1147 aaKnown RBP4.27□□□□□ -1.73
PHO88YBR106W PCL2P25693 308 aa4.27□□□□□ -1.73
PHO88YBR106W DID4P36108 232 aa4.27□□□□□ -1.73
PHO88YBR106W YBR071WP38243 211 aa4.27□□□□□ -1.73
PHO88YBR106W TSL1P38427 1098 aaKnown RBP4.27□□□□□ -1.73
PHO88YBR106W DOT6P40059 670 aaKnown RBP4.27□□□□□ -1.73
PHO88YBR106W EMP65P40085 556 aa4.27□□□□□ -1.73
PHO88YBR106W GZF3P42944 551 aaKnown RBP4.27□□□□□ -1.73
PHO88YBR106W DAS1P47005 663 aa4.27□□□□□ -1.73
PHO88YBR106W YKE2P52553 114 aa4.27□□□□□ -1.73
PHO88YBR106W ARI1P53111 347 aaKnown RBP4.27□□□□□ -1.73
PHO88YBR106W PEX8P53248 589 aa4.27□□□□□ -1.73
PHO88YBR106W SRT1Q03175 343 aa4.27□□□□□ -1.73
PHO88YBR106W NHX1Q04121 633 aa4.27□□□□□ -1.73
PHO88YBR106W HRQ1Q05549 1077 aa4.27□□□□□ -1.73
PHO88YBR106W MET7Q08645 548 aa4.27□□□□□ -1.73
PHO88YBR106W BI4P03879 638 aa4.26□□□□□ -1.73
PHO88YBR106W RAD18P10862 487 aa4.26□□□□□ -1.73
PHO88YBR106W AEP2P22136 580 aa4.26□□□□□ -1.73
PHO88YBR106W SSD1P24276 1250 aaKnown RBP RIP-Chip data4.26□□□□□ -1.73not detected
PHO88YBR106W MEF1P25039 761 aa4.26□□□□□ -1.73
PHO88YBR106W YKL151CP36059 337 aa4.26□□□□□ -1.73
PHO88YBR106W HSL7P38274 827 aa4.26□□□□□ -1.73
PHO88YBR106W SEC26P41810 973 aaKnown RBP4.26□□□□□ -1.73
PHO88YBR106W FOL2P51601 243 aaKnown RBP4.26□□□□□ -1.73
PHO88YBR106W MET13P53128 600 aa4.26□□□□□ -1.73
PHO88YBR106W BUD9P53226 547 aa4.26□□□□□ -1.73
PHO88YBR106W MTQ2Q03920 221 aaPredicted RBP4.26□□□□□ -1.73
PHO88YBR106W HPF1Q05164 967 aa4.26□□□□□ -1.73
PHO88YBR106W RSC58Q07979 502 aa4.26□□□□□ -1.73
PHO88YBR106W YPL277CQ08989 487 aa4.26□□□□□ -1.73
PHO88YBR106W ENV7Q12003 364 aa4.26□□□□□ -1.73
PHO88YBR106W NYV1Q12255 253 aa4.26□□□□□ -1.73
PHO88YBR106W KAR1P11927 433 aa4.25□□□□□ -1.73
PHO88YBR106W ACE2P21192 770 aa4.25□□□□□ -1.73
PHO88YBR106W PER1P25625 357 aa4.25□□□□□ -1.73
PHO88YBR106W EUG1P32474 517 aa4.25□□□□□ -1.73
PHO88YBR106W PRP19P32523 503 aaKnown RBP4.25□□□□□ -1.73
PHO88YBR106W SEC6P32844 805 aa4.25□□□□□ -1.73
PHO88YBR106W RFC5P38251 354 aa4.25□□□□□ -1.73
PHO88YBR106W MCX1P38323 520 aaPredicted RBP4.25□□□□□ -1.73
PHO88YBR106W PCM1P38628 557 aaKnown RBP4.25□□□□□ -1.73
PHO88YBR106W NIT1P40447 199 aa4.25□□□□□ -1.73
PHO88YBR106W GPP1P41277 250 aaKnown RBP4.25□□□□□ -1.73
PHO88YBR106W BFA1P47113 574 aa4.25□□□□□ -1.73
PHO88YBR106W MTC3P53077 123 aa4.25□□□□□ -1.73
PHO88YBR106W RCM1P53972 490 aa4.25□□□□□ -1.73
PHO88YBR106W SVS1Q12254 260 aa4.25□□□□□ -1.73
PHO88YBR106W RPS9AO13516 197 aaKnown RBP4.24□□□□□ -1.73
PHO88YBR106W MSB1P21339 1137 aaKnown RBP4.24□□□□□ -1.73
PHO88YBR106W AFR1P33304 620 aa4.24□□□□□ -1.73
PHO88YBR106W ATG19P35193 415 aa4.24□□□□□ -1.73
PHO88YBR106W MCD4P36051 919 aa4.24□□□□□ -1.73
PHO88YBR106W VPS24P36095 224 aaKnown RBP4.24□□□□□ -1.73
PHO88YBR106W PEA2P40091 420 aa4.24□□□□□ -1.73
PHO88YBR106W RLP7P40693 322 aaKnown RBP4.24□□□□□ -1.73
PHO88YBR106W MNN11P46985 422 aaKnown RBP4.24□□□□□ -1.73
PHO88YBR106W ALY2P47029 1046 aa4.24□□□□□ -1.73
PHO88YBR106W PEX14P53112 341 aa4.24□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 45 ms