RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 TMEM87AQ8NBN3 555 aa16.65■□□□□ 0.26
PHGDH-233ENST00000642021 HYPKQ9NX55 129 aa16.65■□□□□ 0.26
PHGDH-233ENST00000642021 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.65■□□□□ 0.26
PHGDH-233ENST00000642021 N4BP2Q86UW6 1770 aaPredicted RBP16.64■□□□□ 0.25
PHGDH-233ENST00000642021 PRAMEF22A3QJZ6 481 aa16.64■□□□□ 0.25
PHGDH-233ENST00000642021 USP42Q9H9J4 1324 aaKnown RBP16.64■□□□□ 0.25
PHGDH-233ENST00000642021 TCHHQ07283 1943 aa16.64■□□□□ 0.25
PHGDH-233ENST00000642021 GLRX3O76003 335 aaKnown RBP16.64■□□□□ 0.25
PHGDH-233ENST00000642021 HOXB7P09629 217 aa16.64■□□□□ 0.25
PHGDH-233ENST00000642021 PHF8Q9UPP1 1060 aa16.64■□□□□ 0.25
PHGDH-233ENST00000642021 TEFQ10587 303 aa16.63■□□□□ 0.25
PHGDH-233ENST00000642021 COL9A3Q14050 684 aaPredicted RBP16.63■□□□□ 0.25
PHGDH-233ENST00000642021 CWF19L2Q2TBE0 894 aaKnown RBP16.63■□□□□ 0.25
PHGDH-233ENST00000642021 TTC41PQ6P2S7 1318 aa16.63■□□□□ 0.25
PHGDH-233ENST00000642021 MCM5P33992 734 aa16.63■□□□□ 0.25
PHGDH-233ENST00000642021 PRPF40BQ6NWY9 871 aaKnown RBP16.63■□□□□ 0.25
PHGDH-233ENST00000642021 CCDC83Q8IWF9 413 aa16.63■□□□□ 0.25
PHGDH-233ENST00000642021 DIAPH3Q9NSV4 1193 aa16.63■□□□□ 0.25
PHGDH-233ENST00000642021 SMC3Q9UQE7 1217 aa16.63■□□□□ 0.25
PHGDH-233ENST00000642021 MAP3K2Q9Y2U5 619 aa16.63■□□□□ 0.25
PHGDH-233ENST00000642021 F13A1P00488 732 aa16.62■□□□□ 0.25
PHGDH-233ENST00000642021 TERF1P54274 439 aa16.62■□□□□ 0.25
PHGDH-233ENST00000642021 MTX1Q13505 466 aa16.62■□□□□ 0.25
PHGDH-233ENST00000642021 HSP90AB4PQ58FF6 505 aa16.62■□□□□ 0.25
PHGDH-233ENST00000642021 ZNF530Q6P9A1 599 aaPredicted RBP16.62■□□□□ 0.25
PHGDH-233ENST00000642021 CLASRPQ8N2M8 674 aaKnown RBP16.62■□□□□ 0.25
PHGDH-233ENST00000642021 FIBPO43427 364 aa16.62■□□□□ 0.25
PHGDH-233ENST00000642021 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.62■□□□□ 0.25
PHGDH-233ENST00000642021 PHF14O94880 888 aa16.61■□□□□ 0.25
PHGDH-233ENST00000642021 ST3GAL1Q11201 340 aa16.61■□□□□ 0.25
PHGDH-233ENST00000642021 JAKMIP1Q96N16 626 aaKnown RBP16.61■□□□□ 0.25
PHGDH-233ENST00000642021 ECHDC1Q9NTX5 307 aa16.61■□□□□ 0.25
PHGDH-233ENST00000642021 USP25Q9UHP3 1055 aa16.61■□□□□ 0.25
PHGDH-233ENST00000642021 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.61■□□□□ 0.252e-6■■■■■ 31.1
PHGDH-233ENST00000642021 SETD1BQ9UPS6 1966 aaKnown RBP16.61■□□□□ 0.25
PHGDH-233ENST00000642021 GJB2P29033 226 aa16.61■□□□□ 0.25
PHGDH-233ENST00000642021 CCDC183Q5T5S1 534 aa16.61■□□□□ 0.25
PHGDH-233ENST00000642021 ZNF830Q96NB3 372 aaPredicted RBP16.61■□□□□ 0.25
PHGDH-233ENST00000642021 C9orf78Q9NZ63 289 aaPredicted RBP16.61■□□□□ 0.25
PHGDH-233ENST00000642021 PTMAP06454 111 aaKnown RBP16.6■□□□□ 0.25
PHGDH-233ENST00000642021 AKAP4Q5JQC9 854 aa16.6■□□□□ 0.25
PHGDH-233ENST00000642021 DBF4Q9UBU7 674 aaPredicted RBP16.6■□□□□ 0.25
PHGDH-233ENST00000642021 MED1Q15648 1581 aaPredicted RBP16.6■□□□□ 0.25
PHGDH-233ENST00000642021 HCLS1P14317 486 aaPredicted RBP16.6■□□□□ 0.25
PHGDH-233ENST00000642021 DNM1Q05193 864 aaKnown RBP16.6■□□□□ 0.25
PHGDH-233ENST00000642021 PDRG1Q9NUG6 133 aa16.6■□□□□ 0.25
PHGDH-233ENST00000642021 UBE2HP62256 183 aa16.6■□□□□ 0.25
PHGDH-233ENST00000642021 KAZALD1Q96I82 304 aa16.6■□□□□ 0.25
PHGDH-233ENST00000642021 ZSWIM6Q9HCJ5 1215 aa16.6■□□□□ 0.25
PHGDH-233ENST00000642021 MTMR6Q9Y217 621 aa16.6■□□□□ 0.25
PHGDH-233ENST00000642021 GIGYF1O75420 1035 aaPredicted RBP16.59■□□□□ 0.25
PHGDH-233ENST00000642021 NECTIN1Q15223 517 aa16.59■□□□□ 0.25
PHGDH-233ENST00000642021 FAM227BQ96M60 508 aa16.59■□□□□ 0.25
PHGDH-233ENST00000642021 RNMTO43148 476 aaKnown RBP16.59■□□□□ 0.25
PHGDH-233ENST00000642021 IFIT2P09913 472 aaKnown RBP16.59■□□□□ 0.25
PHGDH-233ENST00000642021 ME3Q16798 604 aa16.59■□□□□ 0.25
PHGDH-233ENST00000642021 VPS53Q5VIR6 699 aa16.59■□□□□ 0.25
PHGDH-233ENST00000642021 NECAB1Q8N987 351 aa16.59■□□□□ 0.25
PHGDH-233ENST00000642021 UQCRHLA0A096LP55 91 aa16.58■□□□□ 0.25
PHGDH-233ENST00000642021 SASH1O94885 1247 aa16.58■□□□□ 0.25
PHGDH-233ENST00000642021 UQCRHP07919 91 aa16.58■□□□□ 0.25
PHGDH-233ENST00000642021 KSR2Q6VAB6 950 aa16.58■□□□□ 0.25
PHGDH-233ENST00000642021 AACSQ86V21 672 aa16.58■□□□□ 0.25
PHGDH-233ENST00000642021 RUFY2Q8WXA3 655 aa16.58■□□□□ 0.25
PHGDH-233ENST00000642021 KCNB2Q92953 911 aa16.58■□□□□ 0.25
PHGDH-233ENST00000642021 GIMAP6Q6P9H5 292 aa16.58■□□□□ 0.24
PHGDH-233ENST00000642021 EAF2Q96CJ1 260 aaPredicted RBP16.58■□□□□ 0.24
PHGDH-233ENST00000642021 PDCL3Q9H2J4 239 aa16.58■□□□□ 0.24
PHGDH-233ENST00000642021 CSPP1Q1MSJ5 1256 aa16.57■□□□□ 0.24
PHGDH-233ENST00000642021 PLEKHO1Q53GL0 409 aaPredicted RBP16.57■□□□□ 0.24
PHGDH-233ENST00000642021 FAM184AQ8NB25 1140 aa16.57■□□□□ 0.24
PHGDH-233ENST00000642021 SUCLG2Q96I99 432 aa16.57■□□□□ 0.24
PHGDH-233ENST00000642021 CCDC8Q9H0W5 538 aaPredicted RBP16.57■□□□□ 0.24
PHGDH-233ENST00000642021 ALDH1L1O75891 902 aa16.57■□□□□ 0.24
PHGDH-233ENST00000642021 PSME1Q06323 249 aa16.57■□□□□ 0.24
PHGDH-233ENST00000642021 UVSSAQ2YD98 709 aa16.57■□□□□ 0.24
PHGDH-233ENST00000642021 CYP46A1Q9Y6A2 500 aa16.57■□□□□ 0.24
PHGDH-233ENST00000642021 NFAT5O94916 1531 aa16.56■□□□□ 0.24
PHGDH-233ENST00000642021 ADCY5O95622 1261 aa16.56■□□□□ 0.24
PHGDH-233ENST00000642021 ESCO1Q5FWF5 840 aa16.56■□□□□ 0.24
PHGDH-233ENST00000642021 EVI5LQ96CN4 794 aa16.56■□□□□ 0.24
PHGDH-233ENST00000642021 FAM13BQ9NYF5 915 aa16.56■□□□□ 0.24
PHGDH-233ENST00000642021 TLR7Q9NYK1 1049 aaKnown RBP16.56■□□□□ 0.24
PHGDH-233ENST00000642021 TPCN1Q9ULQ1 816 aa16.56■□□□□ 0.24
PHGDH-233ENST00000642021 RBM8AQ9Y5S9 174 aaKnown RBP16.56■□□□□ 0.24
PHGDH-233ENST00000642021 CRYBG1Q9Y4K1 1723 aa16.56■□□□□ 0.24
PHGDH-233ENST00000642021 FUCA2Q9BTY2 467 aa16.56■□□□□ 0.24
PHGDH-233ENST00000642021 TM6SF1Q9BZW5 370 aa16.56■□□□□ 0.24
PHGDH-233ENST00000642021 TAF6LQ9Y6J9 622 aa16.56■□□□□ 0.24
PHGDH-233ENST00000642021 LTN1O94822 1766 aa16.56■□□□□ 0.24
PHGDH-233ENST00000642021 PXDNQ92626 1479 aa16.56■□□□□ 0.24
PHGDH-233ENST00000642021 CCDC171Q6TFL3 1326 aa16.56■□□□□ 0.24
PHGDH-233ENST00000642021 USP54Q70EL1 1684 aa16.56■□□□□ 0.24
PHGDH-233ENST00000642021 KDM3BQ7LBC6 1761 aa16.55■□□□□ 0.24
PHGDH-233ENST00000642021 AIMP1Q12904 312 aaKnown RBP16.55■□□□□ 0.24
PHGDH-233ENST00000642021 CREB3L3Q68CJ9 461 aa16.55■□□□□ 0.24
PHGDH-233ENST00000642021 BICC1Q9H694 974 aaKnown RBP16.55■□□□□ 0.24
PHGDH-233ENST00000642021 TTC12Q9H892 705 aaPredicted RBP16.55■□□□□ 0.24
PHGDH-233ENST00000642021 NMIQ13287 307 aaPredicted RBP16.55■□□□□ 0.24
PHGDH-233ENST00000642021 TCEANC2Q96MN5 208 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms