RNA–Protein interactions for RNA: ENST00000640554.1

SDHD-209, Transcript of succinate dehydrogenase complex subunit D, human

TSL 5

Gene SDHD, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SDHD-209	ENST00000640554	PIM2	Q9P1W9	311 aa		18.46	■□□□□ 0.55
SDHD-209	ENST00000640554	NPHP1	O15259	732 aa		18.45	■□□□□ 0.54
SDHD-209	ENST00000640554	PDE6B	P35913	854 aa		18.45	■□□□□ 0.54
SDHD-209	ENST00000640554	ST5	P78524	1137 aa		18.45	■□□□□ 0.54
SDHD-209	ENST00000640554	KRT24	Q2M2I5	525 aa		18.45	■□□□□ 0.54
SDHD-209	ENST00000640554	CNBD1	Q8NA66	436 aa		18.45	■□□□□ 0.54
SDHD-209	ENST00000640554	HYPK	Q9NX55	129 aa		18.45	■□□□□ 0.54
SDHD-209	ENST00000640554	NIP7	Q9Y221	180 aa	Known RBP eCLIP	18.45	■□□□□ 0.54
SDHD-209	ENST00000640554	PXDNL	A1KZ92	1463 aa		18.45	■□□□□ 0.54
SDHD-209	ENST00000640554	LAMB4	A4D0S4	1761 aa		18.45	■□□□□ 0.54
SDHD-209	ENST00000640554	YBX3	P16989	372 aa	Known RBP eCLIP	18.44	■□□□□ 0.54	1e-14	■■□□□ 12.2
SDHD-209	ENST00000640554	GIGYF2	Q6Y7W6	1299 aa	Known RBP	18.44	■□□□□ 0.54
SDHD-209	ENST00000640554	TTLL7	Q6ZT98	887 aa		18.44	■□□□□ 0.54
SDHD-209	ENST00000640554	NBPF5P	Q86XG9	351 aa	Predicted RBP	18.44	■□□□□ 0.54
SDHD-209	ENST00000640554	NYX	Q9GZU5	481 aa		18.44	■□□□□ 0.54
SDHD-209	ENST00000640554		H0YIN7	160 aa		18.43	■□□□□ 0.54
SDHD-209	ENST00000640554	KCNA3	P22001	575 aa		18.43	■□□□□ 0.54
SDHD-209	ENST00000640554	HLF	Q16534	295 aa		18.43	■□□□□ 0.54
SDHD-209	ENST00000640554	HSP90AB3P	Q58FF7	597 aa		18.43	■□□□□ 0.54
SDHD-209	ENST00000640554	DIEXF	Q68CQ4	756 aa	Known RBP	18.43	■□□□□ 0.54
SDHD-209	ENST00000640554	PRR5L	Q6MZQ0	368 aa		18.43	■□□□□ 0.54
SDHD-209	ENST00000640554	SCN7A	Q01118	1682 aa		18.42	■□□□□ 0.54
SDHD-209	ENST00000640554	YY1	P25490	414 aa		18.42	■□□□□ 0.54
SDHD-209	ENST00000640554	DALRD3	Q5D0E6	543 aa	Known RBP	18.42	■□□□□ 0.54
SDHD-209	ENST00000640554	CCDC30	Q5VVM6	783 aa		18.42	■□□□□ 0.54
SDHD-209	ENST00000640554	COPS6	Q7L5N1	327 aa		18.42	■□□□□ 0.54
SDHD-209	ENST00000640554	NECTIN2	Q92692	538 aa		18.42	■□□□□ 0.54
SDHD-209	ENST00000640554	CHPF2	Q9P2E5	772 aa		18.42	■□□□□ 0.54
SDHD-209	ENST00000640554	PROSER3	Q2NL68	480 aa		18.41	■□□□□ 0.54
SDHD-209	ENST00000640554	PARP10	Q53GL7	1025 aa		18.41	■□□□□ 0.54
SDHD-209	ENST00000640554	C8orf58	Q8NAV2	365 aa		18.41	■□□□□ 0.54
SDHD-209	ENST00000640554	XAGE3	Q8WTP9	111 aa		18.41	■□□□□ 0.54
SDHD-209	ENST00000640554	ZBTB3	Q9H5J0	574 aa		18.41	■□□□□ 0.54
SDHD-209	ENST00000640554	MYH16	Q9H6N6	1097 aa		18.41	■□□□□ 0.54
SDHD-209	ENST00000640554	BCS1L	Q9Y276	419 aa		18.41	■□□□□ 0.54
SDHD-209	ENST00000640554	KIF13B	Q9NQT8	1826 aa		18.41	■□□□□ 0.54
SDHD-209	ENST00000640554	ATP10D	Q9P241	1426 aa		18.4	■□□□□ 0.54
SDHD-209	ENST00000640554	GTF2E1	P29083	439 aa	Predicted RBP	18.4	■□□□□ 0.54
SDHD-209	ENST00000640554	GOLGA2	Q08379	1002 aa		18.4	■□□□□ 0.54
SDHD-209	ENST00000640554	C2CD5	Q86YS7	1000 aa		18.4	■□□□□ 0.54
SDHD-209	ENST00000640554	ZNF34	Q8IZ26	560 aa		18.4	■□□□□ 0.54
SDHD-209	ENST00000640554	SALL2	Q9Y467	1007 aa	Predicted RBP	18.4	■□□□□ 0.54
SDHD-209	ENST00000640554	ELL2	O00472	640 aa	Predicted RBP	18.39	■□□□□ 0.53
SDHD-209	ENST00000640554	ANXA1	P04083	346 aa		18.39	■□□□□ 0.53
SDHD-209	ENST00000640554	AIMP1	Q12904	312 aa	Known RBP	18.39	■□□□□ 0.53
SDHD-209	ENST00000640554	ANKRD13D	Q6ZTN6	518 aa		18.39	■□□□□ 0.53
SDHD-209	ENST00000640554	PPP1R42	Q7Z4L9	355 aa		18.39	■□□□□ 0.53
SDHD-209	ENST00000640554	PLBD2	Q8NHP8	589 aa		18.39	■□□□□ 0.53
SDHD-209	ENST00000640554	NRXN2	Q9P2S2	1712 aa		18.39	■□□□□ 0.53
SDHD-209	ENST00000640554	CHRNA5	P30532	468 aa		18.38	■□□□□ 0.53
SDHD-209	ENST00000640554	TTLL6	Q8N841	843 aa		18.38	■□□□□ 0.53
SDHD-209	ENST00000640554	TSR2	Q969E8	191 aa	Known RBP	18.38	■□□□□ 0.53
SDHD-209	ENST00000640554	IBTK	Q9P2D0	1353 aa	Predicted RBP	18.38	■□□□□ 0.53
SDHD-209	ENST00000640554	KLRG2	A4D1S0	409 aa	Predicted RBP	18.37	■□□□□ 0.53
SDHD-209	ENST00000640554	TCIRG1	Q13488	830 aa		18.37	■□□□□ 0.53
SDHD-209	ENST00000640554	TWISTNB	Q3B726	338 aa	Predicted RBP	18.37	■□□□□ 0.53
SDHD-209	ENST00000640554	STK31	Q9BXU1	1019 aa		18.37	■□□□□ 0.53
SDHD-209	ENST00000640554	RNF123	Q5XPI4	1314 aa		18.37	■□□□□ 0.53
SDHD-209	ENST00000640554	DDX58	O95786	925 aa	Known RBP	18.36	■□□□□ 0.53
SDHD-209	ENST00000640554	STYK1	Q6J9G0	422 aa		18.36	■□□□□ 0.53
SDHD-209	ENST00000640554	BCOR	Q6W2J9	1755 aa		18.36	■□□□□ 0.53
SDHD-209	ENST00000640554	CNKSR1	Q969H4	720 aa		18.36	■□□□□ 0.53
SDHD-209	ENST00000640554	FANCI	Q9NVI1	1328 aa		18.35	■□□□□ 0.53
SDHD-209	ENST00000640554	SENP3-EIF4A1	A0A087X0R7	540 aa		18.35	■□□□□ 0.53
SDHD-209	ENST00000640554	TSPYL6	Q8N831	410 aa		18.35	■□□□□ 0.53
SDHD-209	ENST00000640554	MASTL	Q96GX5	879 aa		18.35	■□□□□ 0.53
SDHD-209	ENST00000640554	ZNF521	Q96K83	1311 aa		18.34	■□□□□ 0.53
SDHD-209	ENST00000640554	SRGN	P10124	158 aa		18.34	■□□□□ 0.53
SDHD-209	ENST00000640554	GPT	P24298	496 aa		18.34	■□□□□ 0.53
SDHD-209	ENST00000640554	TRIM28	Q13263	835 aa	Known RBP	18.34	■□□□□ 0.53
SDHD-209	ENST00000640554	UTP14A	Q9BVJ6	771 aa	Known RBP	18.34	■□□□□ 0.53
SDHD-209	ENST00000640554	FAM177B	A6PVY3	158 aa		18.33	■□□□□ 0.52
SDHD-209	ENST00000640554	NPR1	P16066	1061 aa		18.33	■□□□□ 0.52
SDHD-209	ENST00000640554	SLC10A5	Q5PT55	438 aa		18.33	■□□□□ 0.52
SDHD-209	ENST00000640554	SUSD4	Q5VX71	490 aa		18.33	■□□□□ 0.52
SDHD-209	ENST00000640554	ARHGAP27	Q6ZUM4	889 aa		18.33	■□□□□ 0.52
SDHD-209	ENST00000640554	ZNF622	Q969S3	477 aa	Known RBP eCLIP	18.33	■□□□□ 0.52
SDHD-209	ENST00000640554	WWC3	Q9ULE0	1092 aa		18.33	■□□□□ 0.52
SDHD-209	ENST00000640554	UBN2	Q6ZU65	1347 aa		18.32	■□□□□ 0.52
SDHD-209	ENST00000640554	ALDH1B1	P30837	517 aa		18.32	■□□□□ 0.52
SDHD-209	ENST00000640554	RIC3	Q7Z5B4	369 aa		18.32	■□□□□ 0.52
SDHD-209	ENST00000640554	NLRP10	Q86W26	655 aa		18.32	■□□□□ 0.52
SDHD-209	ENST00000640554	CCDC24	Q8N4L8	307 aa		18.32	■□□□□ 0.52
SDHD-209	ENST00000640554	AFDN	P55196	1824 aa	Known RBP	18.32	■□□□□ 0.52
SDHD-209	ENST00000640554		E9PSI1	815 aa		18.31	■□□□□ 0.52
SDHD-209	ENST00000640554	VAMP4	O75379	141 aa		18.31	■□□□□ 0.52
SDHD-209	ENST00000640554	NTSR2	O95665	410 aa		18.31	■□□□□ 0.52
SDHD-209	ENST00000640554	EXOSC9	Q06265	439 aa	Known RBP	18.31	■□□□□ 0.52
SDHD-209	ENST00000640554	SOGA3	Q5TF21	947 aa		18.31	■□□□□ 0.52
SDHD-209	ENST00000640554	KIAA1551	Q9HCM1	1747 aa		18.31	■□□□□ 0.52
SDHD-209	ENST00000640554	RIC1	Q4ADV7	1423 aa		18.31	■□□□□ 0.52
SDHD-209	ENST00000640554	HSP90B1	P14625	803 aa	Known RBP	18.3	■□□□□ 0.52
SDHD-209	ENST00000640554	CRY2	Q49AN0	593 aa		18.3	■□□□□ 0.52
SDHD-209	ENST00000640554	ERFE	Q4G0M1	354 aa		18.3	■□□□□ 0.52
SDHD-209	ENST00000640554	MIER1	Q8N108	512 aa		18.3	■□□□□ 0.52
SDHD-209	ENST00000640554	NLRP3	Q96P20	1036 aa		18.3	■□□□□ 0.52
SDHD-209	ENST00000640554	ISCA1	Q9BUE6	129 aa		18.3	■□□□□ 0.52
SDHD-209	ENST00000640554	PHAX	Q9H814	394 aa	Known RBP	18.3	■□□□□ 0.52
SDHD-209	ENST00000640554	SLC4A2	P04920	1241 aa		18.29	■□□□□ 0.52
SDHD-209	ENST00000640554	NUTM1	Q86Y26	1132 aa		18.29	■□□□□ 0.52

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