RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 CCDC39Q9UFE4 941 aa17.54■□□□□ 0.4
SCARB2-221ENST00000640341 TPM2P07951 284 aa17.54■□□□□ 0.4
SCARB2-221ENST00000640341 MYL6BP14649 208 aa17.54■□□□□ 0.4
SCARB2-221ENST00000640341 GJB2P29033 226 aa17.54■□□□□ 0.4
SCARB2-221ENST00000640341 DNM1Q05193 864 aaKnown RBP17.54■□□□□ 0.4
SCARB2-221ENST00000640341 C17orf53Q8N3J3 647 aaPredicted RBP17.54■□□□□ 0.4
SCARB2-221ENST00000640341 BOLA2Q9H3K6 86 aa17.54■□□□□ 0.4
SCARB2-221ENST00000640341 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.53■□□□□ 0.4
SCARB2-221ENST00000640341 PDRG1Q9NUG6 133 aa17.53■□□□□ 0.4
SCARB2-221ENST00000640341 GLRX3O76003 335 aaKnown RBP17.53■□□□□ 0.4
SCARB2-221ENST00000640341 ZSCAN22P10073 491 aaPredicted RBP17.53■□□□□ 0.4
SCARB2-221ENST00000640341 STK3Q13188 491 aa17.53■□□□□ 0.4
SCARB2-221ENST00000640341 FAM227BQ96M60 508 aa17.53■□□□□ 0.4
SCARB2-221ENST00000640341 UQCRHLA0A096LP55 91 aa17.53■□□□□ 0.4
SCARB2-221ENST00000640341 PHF14O94880 888 aa17.53■□□□□ 0.4
SCARB2-221ENST00000640341 UQCRHP07919 91 aa17.53■□□□□ 0.4
SCARB2-221ENST00000640341 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.53■□□□□ 0.4
SCARB2-221ENST00000640341 POLA2Q14181 598 aa17.52■□□□□ 0.4
SCARB2-221ENST00000640341 TTC12Q9H892 705 aaPredicted RBP17.52■□□□□ 0.4
SCARB2-221ENST00000640341 SLC39A6Q13433 755 aa17.52■□□□□ 0.39
SCARB2-221ENST00000640341 COL9A3Q14050 684 aaPredicted RBP17.52■□□□□ 0.39
SCARB2-221ENST00000640341 HSP90AB4PQ58FF6 505 aa17.51■□□□□ 0.39
SCARB2-221ENST00000640341 ECHDC1Q9NTX5 307 aa17.51■□□□□ 0.39
SCARB2-221ENST00000640341 NDUFB9Q9Y6M9 179 aa17.51■□□□□ 0.39
SCARB2-221ENST00000640341 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.51■□□□□ 0.39
SCARB2-221ENST00000640341 RUFY2Q8WXA3 655 aa17.5■□□□□ 0.39
SCARB2-221ENST00000640341 DBF4Q9UBU7 674 aaPredicted RBP17.5■□□□□ 0.39
SCARB2-221ENST00000640341 CYP46A1Q9Y6A2 500 aa17.5■□□□□ 0.39
SCARB2-221ENST00000640341 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.5■□□□□ 0.39
SCARB2-221ENST00000640341 EDC3Q96F86 508 aaKnown RBP17.5■□□□□ 0.39
SCARB2-221ENST00000640341 GPATCH3Q96I76 525 aa17.5■□□□□ 0.39
SCARB2-221ENST00000640341 ZKSCAN1P17029 563 aaPredicted RBP17.5■□□□□ 0.39
SCARB2-221ENST00000640341 CAMK4Q16566 473 aa17.5■□□□□ 0.39
SCARB2-221ENST00000640341 IP6K1Q92551 441 aa17.5■□□□□ 0.39
SCARB2-221ENST00000640341 F13A1P00488 732 aa17.49■□□□□ 0.39
SCARB2-221ENST00000640341 G3BP1Q13283 466 aaKnown RBP eCLIP17.49■□□□□ 0.39
SCARB2-221ENST00000640341 FSD1Q9BTV5 496 aa17.49■□□□□ 0.39
SCARB2-221ENST00000640341 TLR7Q9NYK1 1049 aaKnown RBP17.49■□□□□ 0.39
SCARB2-221ENST00000640341 RPAP1Q9BWH6 1393 aaPredicted RBP17.49■□□□□ 0.39
SCARB2-221ENST00000640341 PLEKHO1Q53GL0 409 aaPredicted RBP17.49■□□□□ 0.39
SCARB2-221ENST00000640341 SPC24Q8NBT2 197 aa17.49■□□□□ 0.39
SCARB2-221ENST00000640341 ADCY5O95622 1261 aa17.49■□□□□ 0.39
SCARB2-221ENST00000640341 CCDC183Q5T5S1 534 aa17.48■□□□□ 0.39
SCARB2-221ENST00000640341 RIC3Q7Z5B4 369 aa17.48■□□□□ 0.39
SCARB2-221ENST00000640341 TTC14Q96N46 770 aa17.48■□□□□ 0.39
SCARB2-221ENST00000640341 FOSBP53539 338 aa17.48■□□□□ 0.39
SCARB2-221ENST00000640341 BICC1Q9H694 974 aaKnown RBP17.48■□□□□ 0.39
SCARB2-221ENST00000640341 HYPKQ9NX55 129 aa17.48■□□□□ 0.39
SCARB2-221ENST00000640341 RBM8AQ9Y5S9 174 aaKnown RBP17.48■□□□□ 0.39
SCARB2-221ENST00000640341 PPFIA3O75145 1194 aa17.47■□□□□ 0.39
SCARB2-221ENST00000640341 ZC3H6P61129 1189 aaKnown RBP17.47■□□□□ 0.39
SCARB2-221ENST00000640341 HS1BP3Q53T59 392 aa17.47■□□□□ 0.39
SCARB2-221ENST00000640341 AOX1Q06278 1338 aa17.47■□□□□ 0.39
SCARB2-221ENST00000640341 ME3Q16798 604 aa17.47■□□□□ 0.39
SCARB2-221ENST00000640341 SUCLG2Q96I99 432 aa17.47■□□□□ 0.39
SCARB2-221ENST00000640341 RGPD8O14715 1765 aaPredicted RBP17.47■□□□□ 0.39
SCARB2-221ENST00000640341 ADCY9O60503 1353 aa17.47■□□□□ 0.39
SCARB2-221ENST00000640341 NMIQ13287 307 aaPredicted RBP17.47■□□□□ 0.39
SCARB2-221ENST00000640341 LARP1BQ659C4 914 aaKnown RBP17.47■□□□□ 0.39
SCARB2-221ENST00000640341 TSC1Q92574 1164 aa17.47■□□□□ 0.39
SCARB2-221ENST00000640341 ORAI2Q96SN7 254 aa17.47■□□□□ 0.39
SCARB2-221ENST00000640341 EAF2Q96CJ1 260 aaPredicted RBP17.46■□□□□ 0.39
SCARB2-221ENST00000640341 TFIP11Q9UBB9 837 aaKnown RBP17.46■□□□□ 0.39
SCARB2-221ENST00000640341 UBE2HP62256 183 aa17.46■□□□□ 0.39
SCARB2-221ENST00000640341 KIAA2012Q0VF49 1180 aa17.46■□□□□ 0.39
SCARB2-221ENST00000640341 UBR1Q8IWV7 1749 aa17.46■□□□□ 0.39
SCARB2-221ENST00000640341 FAM177BA6PVY3 158 aa17.46■□□□□ 0.38
SCARB2-221ENST00000640341 ZNF500O60304 480 aaPredicted RBP17.46■□□□□ 0.38
SCARB2-221ENST00000640341 AKAP4Q5JQC9 854 aa17.46■□□□□ 0.38
SCARB2-221ENST00000640341 ATP6V1DQ9Y5K8 247 aa17.46■□□□□ 0.38
SCARB2-221ENST00000640341 TAF6LQ9Y6J9 622 aa17.46■□□□□ 0.38
SCARB2-221ENST00000640341 RGPD1P0DJD0 1748 aa17.45■□□□□ 0.38
SCARB2-221ENST00000640341 DIP2AQ14689 1571 aa17.45■□□□□ 0.38
SCARB2-221ENST00000640341 RNMTO43148 476 aaKnown RBP17.45■□□□□ 0.38
SCARB2-221ENST00000640341 TAOK2Q9UL54 1235 aa17.45■□□□□ 0.38
SCARB2-221ENST00000640341 GOLGA6L4A6NEF3 574 aa17.44■□□□□ 0.38
SCARB2-221ENST00000640341 GIGYF1O75420 1035 aaPredicted RBP17.44■□□□□ 0.38
SCARB2-221ENST00000640341 CHGBP05060 677 aa17.44■□□□□ 0.38
SCARB2-221ENST00000640341 KSR2Q6VAB6 950 aa17.44■□□□□ 0.38
SCARB2-221ENST00000640341 NAP1L2Q9ULW6 460 aaPredicted RBP17.44■□□□□ 0.38
SCARB2-221ENST00000640341 CREB3L3Q68CJ9 461 aa17.44■□□□□ 0.38
SCARB2-221ENST00000640341 TPCN1Q9ULQ1 816 aa17.44■□□□□ 0.38
SCARB2-221ENST00000640341 GRM8O00222 908 aa17.44■□□□□ 0.38
SCARB2-221ENST00000640341 CKAP2LQ8IYA6 745 aa17.44■□□□□ 0.38
SCARB2-221ENST00000640341 ANKRD24Q8TF21 1146 aa17.44■□□□□ 0.38
SCARB2-221ENST00000640341 A0A0D9SFI3 127 aa17.43■□□□□ 0.38
SCARB2-221ENST00000640341 GCP02774 474 aa17.43■□□□□ 0.38
SCARB2-221ENST00000640341 DNAJC2Q99543 621 aaKnown RBP17.43■□□□□ 0.38
SCARB2-221ENST00000640341 MTMR6Q9Y217 621 aa17.43■□□□□ 0.38
SCARB2-221ENST00000640341 TCHHQ07283 1943 aa17.43■□□□□ 0.38
SCARB2-221ENST00000640341 TTC41PQ6P2S7 1318 aa17.43■□□□□ 0.38
SCARB2-221ENST00000640341 EVI5LQ96CN4 794 aa17.43■□□□□ 0.38
SCARB2-221ENST00000640341 BABAM1Q9NWV8 329 aa17.43■□□□□ 0.38
SCARB2-221ENST00000640341 CCDC171Q6TFL3 1326 aa17.43■□□□□ 0.38
SCARB2-221ENST00000640341 SASH1O94885 1247 aa17.43■□□□□ 0.38
SCARB2-221ENST00000640341 FGD1P98174 961 aa17.43■□□□□ 0.38
SCARB2-221ENST00000640341 CEBPZQ03701 1054 aaKnown RBP17.43■□□□□ 0.38
SCARB2-221ENST00000640341 CSPP1Q1MSJ5 1256 aa17.43■□□□□ 0.38
SCARB2-221ENST00000640341 CDC37L1Q7L3B6 337 aa17.43■□□□□ 0.38
SCARB2-221ENST00000640341 LRRC2Q9BYS8 371 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms