RNA–Protein interactions for RNA: ENST00000640264.1

HNRNPU-227, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 3

Gene HNRNPU, Length 328 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-227ENST00000640264 STYK1Q6J9G0 422 aa14.1□□□□□ -0.15
HNRNPU-227ENST00000640264 ZNF790Q6PG37 636 aa14.1□□□□□ -0.15
HNRNPU-227ENST00000640264 GNAT3A8MTJ3 354 aa14.09□□□□□ -0.15
HNRNPU-227ENST00000640264 DDNO94850 711 aaPredicted RBP14.09□□□□□ -0.15
HNRNPU-227ENST00000640264 PRPF40BQ6NWY9 871 aaKnown RBP14.09□□□□□ -0.15
HNRNPU-227ENST00000640264 MASTLQ96GX5 879 aa14.09□□□□□ -0.15
HNRNPU-227ENST00000640264 FMNL2Q96PY5 1086 aa14.09□□□□□ -0.15
HNRNPU-227ENST00000640264 SLX4Q8IY92 1834 aa14.08□□□□□ -0.15
HNRNPU-227ENST00000640264 CACNA1SQ13698 1873 aa14.08□□□□□ -0.16
HNRNPU-227ENST00000640264 NEFLP07196 543 aa14.08□□□□□ -0.16
HNRNPU-227ENST00000640264 SRGNP10124 158 aa14.08□□□□□ -0.16
HNRNPU-227ENST00000640264 GAS2L2Q8NHY3 880 aa14.08□□□□□ -0.16
HNRNPU-227ENST00000640264 A1BGP04217 495 aa14.07□□□□□ -0.16
HNRNPU-227ENST00000640264 POTEIP0CG38 1075 aa14.07□□□□□ -0.16
HNRNPU-227ENST00000640264 POTEJP0CG39 1038 aa14.07□□□□□ -0.16
HNRNPU-227ENST00000640264 CC2D1BQ5T0F9 858 aaKnown RBP14.07□□□□□ -0.16
HNRNPU-227ENST00000640264 LDHDQ86WU2 507 aa14.07□□□□□ -0.16
HNRNPU-227ENST00000640264 IL17REQ8NFR9 667 aa14.07□□□□□ -0.16
HNRNPU-227ENST00000640264 CNTNAP1P78357 1384 aa14.07□□□□□ -0.16
HNRNPU-227ENST00000640264 ARFGEF2Q9Y6D5 1785 aa14.06□□□□□ -0.16
HNRNPU-227ENST00000640264 SCN4AP35499 1836 aa14.06□□□□□ -0.16
HNRNPU-227ENST00000640264 U2SURPO15042 1029 aaKnown RBP14.06□□□□□ -0.16
HNRNPU-227ENST00000640264 CAMTA2O94983 1202 aa14.06□□□□□ -0.16
HNRNPU-227ENST00000640264 ERICH6BQ5W0A0 696 aa14.06□□□□□ -0.16
HNRNPU-227ENST00000640264 AIDAQ96BJ3 306 aa14.06□□□□□ -0.16
HNRNPU-227ENST00000640264 SIPA1L3O60292 1781 aaPredicted RBP14.06□□□□□ -0.16
HNRNPU-227ENST00000640264 FOXN1O15353 648 aa14.05□□□□□ -0.16
HNRNPU-227ENST00000640264 PER1O15534 1290 aaPredicted RBP14.05□□□□□ -0.16
HNRNPU-227ENST00000640264 CCDC93Q567U6 631 aa14.05□□□□□ -0.16
HNRNPU-227ENST00000640264 NBPF5PQ86XG9 351 aaPredicted RBP14.05□□□□□ -0.16
HNRNPU-227ENST00000640264 DZIP3Q86Y13 1208 aaKnown RBP14.05□□□□□ -0.16
HNRNPU-227ENST00000640264 L3MBTL3Q96JM7 780 aaPredicted RBP14.05□□□□□ -0.16
HNRNPU-227ENST00000640264 TAF1DQ9H5J8 278 aaPredicted RBP14.05□□□□□ -0.16
HNRNPU-227ENST00000640264 PRDM10Q9NQV6 1147 aa14.05□□□□□ -0.16
HNRNPU-227ENST00000640264 PASKQ96RG2 1323 aa14.05□□□□□ -0.16
HNRNPU-227ENST00000640264 TMEM88BA6NKF7 163 aa14.04□□□□□ -0.16
HNRNPU-227ENST00000640264 BTBD11A6QL63 1104 aa14.04□□□□□ -0.16
HNRNPU-227ENST00000640264 CTCFP49711 727 aaPredicted RBP14.04□□□□□ -0.16
HNRNPU-227ENST00000640264 ZNF652Q9Y2D9 606 aa14.04□□□□□ -0.16
HNRNPU-227ENST00000640264 BCORQ6W2J9 1755 aa14.04□□□□□ -0.16
HNRNPU-227ENST00000640264 NPR1P16066 1061 aa14.03□□□□□ -0.16
HNRNPU-227ENST00000640264 HNRNPUQ00839 825 aaKnown RBP eCLIP14.03□□□□□ -0.16
HNRNPU-227ENST00000640264 EAPPQ56P03 285 aaPredicted RBP14.03□□□□□ -0.16
HNRNPU-227ENST00000640264 CLEC4GQ6UXB4 293 aa14.03□□□□□ -0.16
HNRNPU-227ENST00000640264 CLEC11AQ9Y240 323 aa14.03□□□□□ -0.16
HNRNPU-227ENST00000640264 ZBED9Q6R2W3 1325 aa14.03□□□□□ -0.16
HNRNPU-227ENST00000640264 NPC1L1Q9UHC9 1359 aa14.02□□□□□ -0.17
HNRNPU-227ENST00000640264 VEGFBP49765 207 aa14.02□□□□□ -0.17
HNRNPU-227ENST00000640264 FKBP4Q02790 459 aaKnown RBP eCLIP14.02□□□□□ -0.17
HNRNPU-227ENST00000640264 CNGB1Q14028 1251 aaPredicted RBP14.02□□□□□ -0.17
HNRNPU-227ENST00000640264 RTKN2Q8IZC4 609 aa14.02□□□□□ -0.17
HNRNPU-227ENST00000640264 C7orf43Q8WVR3 580 aa14.02□□□□□ -0.17
HNRNPU-227ENST00000640264 HACL1Q9UJ83 578 aa14.02□□□□□ -0.17
HNRNPU-227ENST00000640264 CEMIPQ8WUJ3 1361 aa14.01□□□□□ -0.17
HNRNPU-227ENST00000640264 KCNQ3O43525 872 aa14.01□□□□□ -0.17
HNRNPU-227ENST00000640264 ITGBL1O95965 494 aaPredicted RBP14.01□□□□□ -0.17
HNRNPU-227ENST00000640264 TPTE2Q6XPS3 522 aa14.01□□□□□ -0.17
HNRNPU-227ENST00000640264 PNMA8AQ86V59 439 aaPredicted RBP14.01□□□□□ -0.17
HNRNPU-227ENST00000640264 ZNF277Q9NRM2 450 aaPredicted RBP14.01□□□□□ -0.17
HNRNPU-227ENST00000640264 ZNF541Q9H0D2 1346 aa14□□□□□ -0.17
HNRNPU-227ENST00000640264 SNRPA1P09661 255 aaKnown RBP14□□□□□ -0.17
HNRNPU-227ENST00000640264 EPHX2P34913 555 aa14□□□□□ -0.17
HNRNPU-227ENST00000640264 USP16Q9Y5T5 823 aa14□□□□□ -0.17
HNRNPU-227ENST00000640264 COL3A1P02461 1466 aaPredicted RBP13.99□□□□□ -0.17
HNRNPU-227ENST00000640264 KLRG2A4D1S0 409 aaPredicted RBP13.99□□□□□ -0.17
HNRNPU-227ENST00000640264 ALDH1B1P30837 517 aa13.99□□□□□ -0.17
HNRNPU-227ENST00000640264 PIP4K2AP48426 406 aaPredicted RBP13.99□□□□□ -0.17
HNRNPU-227ENST00000640264 CCDC184Q52MB2 194 aa13.99□□□□□ -0.17
HNRNPU-227ENST00000640264 MRS2Q9HD23 443 aa13.99□□□□□ -0.17
HNRNPU-227ENST00000640264 WBP1LQ9NX94 342 aa13.99□□□□□ -0.17
HNRNPU-227ENST00000640264 NIP7Q9Y221 180 aaKnown RBP eCLIP13.99□□□□□ -0.17
HNRNPU-227ENST00000640264 RGL2O15211 777 aa13.98□□□□□ -0.17
HNRNPU-227ENST00000640264 GTF2E1P29083 439 aaPredicted RBP13.98□□□□□ -0.17
HNRNPU-227ENST00000640264 LBX1P52954 281 aa13.98□□□□□ -0.17
HNRNPU-227ENST00000640264 DEFB115Q30KQ5 88 aa13.98□□□□□ -0.17
HNRNPU-227ENST00000640264 CNTROBQ8N137 903 aa13.98□□□□□ -0.17
HNRNPU-227ENST00000640264 PHACTR3Q96KR7 559 aa13.98□□□□□ -0.17
HNRNPU-227ENST00000640264 TSHZ2Q9NRE2 1034 aa13.98□□□□□ -0.17
HNRNPU-227ENST00000640264 PRKAR2BP31323 418 aa13.97□□□□□ -0.17
HNRNPU-227ENST00000640264 IARSP41252 1262 aaKnown RBP13.97□□□□□ -0.17
HNRNPU-227ENST00000640264 MAP1SQ66K74 1059 aaPredicted RBP13.97□□□□□ -0.17
HNRNPU-227ENST00000640264 OLFM4Q6UX06 510 aa13.97□□□□□ -0.17
HNRNPU-227ENST00000640264 GPC2Q8N158 579 aa13.97□□□□□ -0.17
HNRNPU-227ENST00000640264 SYNE4Q8N205 404 aa13.97□□□□□ -0.17
HNRNPU-227ENST00000640264 RTF1Q92541 710 aaKnown RBP13.97□□□□□ -0.17
HNRNPU-227ENST00000640264 CFAP53Q96M91 514 aa13.97□□□□□ -0.17
HNRNPU-227ENST00000640264 RNF123Q5XPI4 1314 aa13.96□□□□□ -0.17
HNRNPU-227ENST00000640264 PRAMEF22A3QJZ6 481 aa13.96□□□□□ -0.17
HNRNPU-227ENST00000640264 RASSF10A6NK89 507 aa13.96□□□□□ -0.17
HNRNPU-227ENST00000640264 FAM177BA6PVY3 158 aa13.96□□□□□ -0.17
HNRNPU-227ENST00000640264 FZD9O00144 591 aa13.96□□□□□ -0.17
HNRNPU-227ENST00000640264 MAP2K1Q02750 393 aaPredicted RBP13.96□□□□□ -0.17
HNRNPU-227ENST00000640264 JDP2Q8WYK2 163 aa13.96□□□□□ -0.17
HNRNPU-227ENST00000640264 ABT1Q9ULW3 272 aaKnown RBP13.96□□□□□ -0.17
HNRNPU-227ENST00000640264 ADAMTSL1Q8N6G6 1762 aa13.96□□□□□ -0.18
HNRNPU-227ENST00000640264 WDR33Q9C0J8 1336 aaKnown RBP13.95□□□□□ -0.18
HNRNPU-227ENST00000640264 RSPH6AQ9H0K4 717 aa13.95□□□□□ -0.18
HNRNPU-227ENST00000640264 NUDCQ9Y266 331 aa13.95□□□□□ -0.18
HNRNPU-227ENST00000640264 NBPF26B4DH59 902 aa13.94□□□□□ -0.18
HNRNPU-227ENST00000640264 HSPA8P11142 646 aaKnown RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 125.5 ms