RNA–Protein interactions for RNA: ENST00000639695.1

RFC1-217, Transcript of replication factor C subunit 1, humanhuman

TSL 5 BASIC

Gene RFC1, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-217ENST00000639695 Q8N3U1 123 aa10.78□□□□□ -0.68
RFC1-217ENST00000639695 RGS22Q8NE09 1264 aa10.78□□□□□ -0.68
RFC1-217ENST00000639695 PCDHGA11Q9Y5H2 935 aa10.78□□□□□ -0.68
RFC1-217ENST00000639695 A6NJY4 79 aa10.77□□□□□ -0.69
RFC1-217ENST00000639695 ADH6P28332 368 aa10.77□□□□□ -0.69
RFC1-217ENST00000639695 MAP7D1Q3KQU3 841 aa10.77□□□□□ -0.69
RFC1-217ENST00000639695 FAM182BQ5T319 152 aa10.77□□□□□ -0.69
RFC1-217ENST00000639695 TRIM11Q96F44 468 aa10.77□□□□□ -0.69
RFC1-217ENST00000639695 CDK2AP1O14519 115 aa10.76□□□□□ -0.69
RFC1-217ENST00000639695 SRPK2P78362 688 aaKnown RBP10.76□□□□□ -0.69
RFC1-217ENST00000639695 TFIP11Q9UBB9 837 aaKnown RBP10.76□□□□□ -0.69
RFC1-217ENST00000639695 MTMR7Q9Y216 660 aa10.76□□□□□ -0.69
RFC1-217ENST00000639695 TXLNAP40222 546 aa10.75□□□□□ -0.69
RFC1-217ENST00000639695 ZDHHC1Q8WTX9 485 aa10.75□□□□□ -0.69
RFC1-217ENST00000639695 CABP1Q9NZU7 370 aa10.75□□□□□ -0.69
RFC1-217ENST00000639695 FAM157BP0CG42 384 aa10.74□□□□□ -0.69
RFC1-217ENST00000639695 NBPF1Q3BBV0 1214 aa10.74□□□□□ -0.69
RFC1-217ENST00000639695 ZDHHC3Q9NYG2 299 aa10.74□□□□□ -0.69
RFC1-217ENST00000639695 EFSO43281 561 aa10.73□□□□□ -0.69
RFC1-217ENST00000639695 ZNF468Q5VIY5 522 aaPredicted RBP10.73□□□□□ -0.69
RFC1-217ENST00000639695 PIK3R2O00459 728 aa10.72□□□□□ -0.69
RFC1-217ENST00000639695 TATP17735 454 aaPredicted RBP10.72□□□□□ -0.69
RFC1-217ENST00000639695 DOC2BQ14184 412 aa10.72□□□□□ -0.69
RFC1-217ENST00000639695 AVENQ9NQS1 362 aaPredicted RBP10.72□□□□□ -0.69
RFC1-217ENST00000639695 NOP53Q9NZM5 478 aaKnown RBP10.72□□□□□ -0.69
RFC1-217ENST00000639695 MDFIQ99750 246 aa10.71□□□□□ -0.69
RFC1-217ENST00000639695 PLVAPQ9BX97 442 aa10.71□□□□□ -0.69
RFC1-217ENST00000639695 ATG7O95352 703 aa10.7□□□□□ -0.7
RFC1-217ENST00000639695 SAMD5Q5TGI4 173 aa10.7□□□□□ -0.7
RFC1-217ENST00000639695 VRTNQ9H8Y1 702 aa10.7□□□□□ -0.7
RFC1-217ENST00000639695 PRR12Q9ULL5 1215 aa10.7□□□□□ -0.7
RFC1-217ENST00000639695 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.69□□□□□ -0.7
RFC1-217ENST00000639695 ZNF358Q9NW07 568 aa10.69□□□□□ -0.7
RFC1-217ENST00000639695 MARK1Q9P0L2 795 aa10.69□□□□□ -0.7
RFC1-217ENST00000639695 SCHIP1Q9P0W5 487 aaPredicted RBP10.69□□□□□ -0.7
RFC1-217ENST00000639695 TBCELQ5QJ74 424 aa10.68□□□□□ -0.7
RFC1-217ENST00000639695 BICDL1Q6ZP65 573 aa10.68□□□□□ -0.7
RFC1-217ENST00000639695 C7orf43Q8WVR3 580 aa10.68□□□□□ -0.7
RFC1-217ENST00000639695 KRTAP4-8Q9BYQ9 185 aa10.68□□□□□ -0.7
RFC1-217ENST00000639695 MAFBQ9Y5Q3 323 aaPredicted RBP10.68□□□□□ -0.7
RFC1-217ENST00000639695 GJA3Q9Y6H8 435 aa10.68□□□□□ -0.7
RFC1-217ENST00000639695 EPHA4P54764 986 aa10.67□□□□□ -0.7
RFC1-217ENST00000639695 CDCA8Q53HL2 280 aa10.67□□□□□ -0.7
RFC1-217ENST00000639695 SH3PXD2AQ5TCZ1 1133 aa10.67□□□□□ -0.7
RFC1-217ENST00000639695 B4GALNT3Q6L9W6 998 aa10.67□□□□□ -0.7
RFC1-217ENST00000639695 UCN2Q96RP3 112 aa10.67□□□□□ -0.7
RFC1-217ENST00000639695 SEMA6BQ9H3T3 888 aa10.67□□□□□ -0.7
RFC1-217ENST00000639695 GTF2IP78347 998 aa10.66□□□□□ -0.7
RFC1-217ENST00000639695 LRRC69Q6ZNQ3 347 aa10.66□□□□□ -0.7
RFC1-217ENST00000639695 SYT9Q86SS6 491 aa10.66□□□□□ -0.7
RFC1-217ENST00000639695 L3MBTL2Q969R5 705 aa10.66□□□□□ -0.7
RFC1-217ENST00000639695 ELOA3CA0A087WX78 387 aaPredicted RBP10.65□□□□□ -0.7
RFC1-217ENST00000639695 ELOA3DA6NLF2 546 aaPredicted RBP10.65□□□□□ -0.7
RFC1-217ENST00000639695 ATP9BO43861 1147 aa10.65□□□□□ -0.7
RFC1-217ENST00000639695 SKIP12755 728 aa10.65□□□□□ -0.7
RFC1-217ENST00000639695 ELOA3BQ3SY89 546 aa10.65□□□□□ -0.7
RFC1-217ENST00000639695 ELOA3Q8NG57 546 aa10.65□□□□□ -0.7
RFC1-217ENST00000639695 EML1O00423 815 aa10.64□□□□□ -0.71
RFC1-217ENST00000639695 COL9A3Q14050 684 aaPredicted RBP10.64□□□□□ -0.71
RFC1-217ENST00000639695 EML3Q32P44 896 aa10.64□□□□□ -0.71
RFC1-217ENST00000639695 FOXD4L4Q8WXT5 416 aaPredicted RBP10.64□□□□□ -0.71
RFC1-217ENST00000639695 SLC30A3Q99726 388 aa10.64□□□□□ -0.71
RFC1-217ENST00000639695 SPATA31C1P0DKV0 1188 aa10.63□□□□□ -0.71
RFC1-217ENST00000639695 NOS2P35228 1153 aa10.63□□□□□ -0.71
RFC1-217ENST00000639695 RBM25P49756 843 aaKnown RBP10.63□□□□□ -0.71
RFC1-217ENST00000639695 SFSWAPQ12872 951 aaKnown RBP10.63□□□□□ -0.71
RFC1-217ENST00000639695 LAMC2Q13753 1193 aa10.63□□□□□ -0.71
RFC1-217ENST00000639695 NCOA4Q13772 614 aa10.63□□□□□ -0.71
RFC1-217ENST00000639695 TEAD4Q15561 434 aa10.63□□□□□ -0.71
RFC1-217ENST00000639695 CCDC27Q2M243 656 aa10.63□□□□□ -0.71
RFC1-217ENST00000639695 TNS4Q8IZW8 715 aa10.63□□□□□ -0.71
RFC1-217ENST00000639695 DEPDC4Q8N2C3 294 aa10.63□□□□□ -0.71
RFC1-217ENST00000639695 NOD1Q9Y239 953 aa10.63□□□□□ -0.71
RFC1-217ENST00000639695 STARD13Q9Y3M8 1113 aa10.63□□□□□ -0.71
RFC1-217ENST00000639695 IVNS1ABPQ9Y6Y0 642 aa10.63□□□□□ -0.71
RFC1-217ENST00000639695 CARNS1A5YM72 827 aa10.62□□□□□ -0.71
RFC1-217ENST00000639695 FAM229AH3BQW9 127 aa10.62□□□□□ -0.71
RFC1-217ENST00000639695 BACH1O14867 736 aa10.62□□□□□ -0.71
RFC1-217ENST00000639695 GATA4P43694 442 aa10.62□□□□□ -0.71
RFC1-217ENST00000639695 C8orf86Q6ZUL3 223 aa10.62□□□□□ -0.71
RFC1-217ENST00000639695 SLC9A9Q8IVB4 645 aa10.62□□□□□ -0.71
RFC1-217ENST00000639695 PSME1Q06323 249 aa10.61□□□□□ -0.71
RFC1-217ENST00000639695 TMEM88BA6NKF7 163 aa10.6□□□□□ -0.71
RFC1-217ENST00000639695 RSPO4Q2I0M5 234 aaPredicted RBP10.6□□□□□ -0.71
RFC1-217ENST00000639695 FOXD4L6Q3SYB3 417 aaPredicted RBP10.6□□□□□ -0.71
RFC1-217ENST00000639695 FOXD4L3Q6VB84 417 aaPredicted RBP10.6□□□□□ -0.71
RFC1-217ENST00000639695 NFATC2IPQ8NCF5 419 aa10.6□□□□□ -0.71
RFC1-217ENST00000639695 SND1Q7KZF4 910 aaKnown RBP eCLIP10.59□□□□□ -0.71
RFC1-217ENST00000639695 RAB44Q7Z6P3 723 aaPredicted RBP10.59□□□□□ -0.71
RFC1-217ENST00000639695 ZNF232Q9UNY5 417 aa10.59□□□□□ -0.71
RFC1-217ENST00000639695 KIAA1024Q9UPX6 916 aa10.59□□□□□ -0.71
RFC1-217ENST00000639695 ADARB2-AS1A8MUL3 147 aa10.58□□□□□ -0.72
RFC1-217ENST00000639695 M0R082 166 aa10.58□□□□□ -0.72
RFC1-217ENST00000639695 SIN3BO75182 1162 aa10.58□□□□□ -0.72
RFC1-217ENST00000639695 ALBP02768 609 aa10.58□□□□□ -0.72
RFC1-217ENST00000639695 ELOAQ14241 798 aaKnown RBP10.58□□□□□ -0.72
RFC1-217ENST00000639695 ZNF417Q8TAU3 575 aa10.58□□□□□ -0.72
RFC1-217ENST00000639695 ZNF587Q96SQ5 575 aaPredicted RBP10.58□□□□□ -0.72
RFC1-217ENST00000639695 USP17L5A8MUK1 530 aa10.57□□□□□ -0.72
RFC1-217ENST00000639695 E9PSI1 815 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms