RNA–Protein interactions for RNA: ENST00000638237.1

NECAP1-210, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene NECAP1, Length 2,517 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-210ENST00000638237 NOL8Q76FK4 1167 aaKnown RBP10.5□□□□□ -0.73
NECAP1-210ENST00000638237 SSH3Q8TE77 659 aa10.5□□□□□ -0.73
NECAP1-210ENST00000638237 MAP7D2Q96T17 732 aa10.5□□□□□ -0.73
NECAP1-210ENST00000638237 R3HCC1Q9Y3T6 440 aaKnown RBP10.5□□□□□ -0.73
NECAP1-210ENST00000638237 KAT6BQ8WYB5 2073 aa10.5□□□□□ -0.73
NECAP1-210ENST00000638237 SCN11AQ9UI33 1791 aa10.49□□□□□ -0.73
NECAP1-210ENST00000638237 SYCE3A1L190 88 aa10.49□□□□□ -0.73
NECAP1-210ENST00000638237 GIGYF1O75420 1035 aaPredicted RBP10.49□□□□□ -0.73
NECAP1-210ENST00000638237 NLRP2Q9NX02 1062 aa10.49□□□□□ -0.73
NECAP1-210ENST00000638237 MAP3K2Q9Y2U5 619 aa10.49□□□□□ -0.73
NECAP1-210ENST00000638237 CRYBG1Q9Y4K1 1723 aa10.49□□□□□ -0.73
NECAP1-210ENST00000638237 NCAPD2Q15021 1401 aa10.49□□□□□ -0.73
NECAP1-210ENST00000638237 MCM2P49736 904 aa10.49□□□□□ -0.73
NECAP1-210ENST00000638237 CHAMP1Q96JM3 812 aa10.49□□□□□ -0.73
NECAP1-210ENST00000638237 ANO2Q9NQ90 1003 aa10.49□□□□□ -0.73
NECAP1-210ENST00000638237 CCDC39Q9UFE4 941 aa10.49□□□□□ -0.73
NECAP1-210ENST00000638237 KIF1AQ12756 1690 aa10.49□□□□□ -0.73
NECAP1-210ENST00000638237 TMEM94Q12767 1356 aa10.48□□□□□ -0.73
NECAP1-210ENST00000638237 AMOTQ4VCS5 1084 aa10.48□□□□□ -0.73
NECAP1-210ENST00000638237 ESYT1Q9BSJ8 1104 aa10.48□□□□□ -0.73
NECAP1-210ENST00000638237 C19orf44Q9H6X5 657 aa10.48□□□□□ -0.73
NECAP1-210ENST00000638237 PA2G4Q9UQ80 394 aaKnown RBP10.48□□□□□ -0.73
NECAP1-210ENST00000638237 MEGF6O75095 1541 aa10.48□□□□□ -0.73
NECAP1-210ENST00000638237 BRD1O95696 1058 aa10.48□□□□□ -0.73
NECAP1-210ENST00000638237 CHMLP26374 656 aa10.48□□□□□ -0.73
NECAP1-210ENST00000638237 HSPA2P54652 639 aa10.48□□□□□ -0.73
NECAP1-210ENST00000638237 RHPN1Q8TCX5 695 aa10.48□□□□□ -0.73
NECAP1-210ENST00000638237 TMX3Q96JJ7 454 aa10.48□□□□□ -0.73
NECAP1-210ENST00000638237 DBF4Q9UBU7 674 aaPredicted RBP10.48□□□□□ -0.73
NECAP1-210ENST00000638237 NSFL1CQ9UNZ2 370 aaKnown RBP10.48□□□□□ -0.73
NECAP1-210ENST00000638237 NEK4P51957 841 aa10.47□□□□□ -0.73
NECAP1-210ENST00000638237 CUL4AQ13619 759 aa10.47□□□□□ -0.73
NECAP1-210ENST00000638237 KDM6AO15550 1401 aaPredicted RBP10.47□□□□□ -0.73
NECAP1-210ENST00000638237 MST1RQ04912 1400 aa10.47□□□□□ -0.73
NECAP1-210ENST00000638237 HOXB7P09629 217 aa10.47□□□□□ -0.73
NECAP1-210ENST00000638237 MYL6BP14649 208 aa10.47□□□□□ -0.73
NECAP1-210ENST00000638237 POLA2Q14181 598 aa10.47□□□□□ -0.73
NECAP1-210ENST00000638237 TPRNQ4KMQ1 711 aa10.47□□□□□ -0.73
NECAP1-210ENST00000638237 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.47□□□□□ -0.73
NECAP1-210ENST00000638237 UQCRHLA0A096LP55 91 aa10.46□□□□□ -0.73
NECAP1-210ENST00000638237 UQCRHP07919 91 aa10.46□□□□□ -0.73
NECAP1-210ENST00000638237 ATF3P18847 181 aa10.46□□□□□ -0.73
NECAP1-210ENST00000638237 RBM10P98175 930 aaKnown RBP10.46□□□□□ -0.73
NECAP1-210ENST00000638237 FOXD4L5Q5VV16 416 aaPredicted RBP10.46□□□□□ -0.73
NECAP1-210ENST00000638237 NFATC2IPQ8NCF5 419 aa10.46□□□□□ -0.73
NECAP1-210ENST00000638237 PI4K2BQ8TCG2 481 aa10.46□□□□□ -0.73
NECAP1-210ENST00000638237 FOXD4L4Q8WXT5 416 aaPredicted RBP10.46□□□□□ -0.73
NECAP1-210ENST00000638237 INTS4Q96HW7 963 aaKnown RBP10.46□□□□□ -0.73
NECAP1-210ENST00000638237 UPF3BQ9BZI7 483 aaKnown RBP10.46□□□□□ -0.73
NECAP1-210ENST00000638237 C9orf78Q9NZ63 289 aaPredicted RBP10.46□□□□□ -0.73
NECAP1-210ENST00000638237 COL18A1P39060 1754 aa10.46□□□□□ -0.73
NECAP1-210ENST00000638237 DYNC1I1O14576 645 aa10.46□□□□□ -0.74
NECAP1-210ENST00000638237 OS9Q13438 667 aaPredicted RBP10.46□□□□□ -0.74
NECAP1-210ENST00000638237 RAPGEF4Q8WZA2 1011 aa10.46□□□□□ -0.74
NECAP1-210ENST00000638237 CSB-PGBD3P0DP91 1061 aa10.45□□□□□ -0.74
NECAP1-210ENST00000638237 ANAPC15P60006 121 aa10.45□□□□□ -0.74
NECAP1-210ENST00000638237 MTERF4Q7Z6M4 381 aaKnown RBP10.45□□□□□ -0.74
NECAP1-210ENST00000638237 FAM13BQ9NYF5 915 aa10.45□□□□□ -0.74
NECAP1-210ENST00000638237 STAP2Q9UGK3 403 aa10.45□□□□□ -0.74
NECAP1-210ENST00000638237 ADAMTS7Q9UKP4 1686 aa10.45□□□□□ -0.74
NECAP1-210ENST00000638237 HEG1Q9ULI3 1381 aa10.45□□□□□ -0.74
NECAP1-210ENST00000638237 JARID2Q92833 1246 aaPredicted RBP10.45□□□□□ -0.74
NECAP1-210ENST00000638237 SYAP1Q96A49 352 aaPredicted RBP10.45□□□□□ -0.74
NECAP1-210ENST00000638237 NPHP3Q7Z494 1330 aa10.45□□□□□ -0.74
NECAP1-210ENST00000638237 AFDNP55196 1824 aaKnown RBP10.45□□□□□ -0.74
NECAP1-210ENST00000638237 MCCP23508 829 aa10.44□□□□□ -0.74
NECAP1-210ENST00000638237 PDIA6Q15084 440 aa10.44□□□□□ -0.74
NECAP1-210ENST00000638237 ZNF790Q6PG37 636 aa10.44□□□□□ -0.74
NECAP1-210ENST00000638237 SASS6Q6UVJ0 657 aa10.44□□□□□ -0.74
NECAP1-210ENST00000638237 KSR2Q6VAB6 950 aa10.44□□□□□ -0.74
NECAP1-210ENST00000638237 KLHDC4Q8TBB5 520 aa10.44□□□□□ -0.74
NECAP1-210ENST00000638237 KIF1BPQ96EK5 621 aa10.44□□□□□ -0.74
NECAP1-210ENST00000638237 IL17RAQ96F46 866 aa10.44□□□□□ -0.74
NECAP1-210ENST00000638237 DNAJC5Q9H3Z4 198 aa10.44□□□□□ -0.74
NECAP1-210ENST00000638237 TSPY26PQ9H489 355 aa10.44□□□□□ -0.74
NECAP1-210ENST00000638237 XIRP1Q702N8 1843 aaKnown RBP10.44□□□□□ -0.74
NECAP1-210ENST00000638237 RNF214Q8ND24 703 aa10.44□□□□□ -0.74
NECAP1-210ENST00000638237 KAZALD1Q96I82 304 aa10.44□□□□□ -0.74
NECAP1-210ENST00000638237 ZNF496Q96IT1 587 aaPredicted RBP10.44□□□□□ -0.74
NECAP1-210ENST00000638237 DTNBO60941 627 aa10.43□□□□□ -0.74
NECAP1-210ENST00000638237 SUCLG2Q96I99 432 aa10.43□□□□□ -0.74
NECAP1-210ENST00000638237 SIL1Q9H173 461 aa10.43□□□□□ -0.74
NECAP1-210ENST00000638237 BICC1Q9H694 974 aaKnown RBP10.43□□□□□ -0.74
NECAP1-210ENST00000638237 CYP27B1O15528 508 aa10.43□□□□□ -0.74
NECAP1-210ENST00000638237 PHF14O94880 888 aa10.43□□□□□ -0.74
NECAP1-210ENST00000638237 PHKG2P15735 406 aa10.43□□□□□ -0.74
NECAP1-210ENST00000638237 SLC52A2Q9HAB3 445 aa10.43□□□□□ -0.74
NECAP1-210ENST00000638237 RAB11FIP3O75154 756 aa10.42□□□□□ -0.74
NECAP1-210ENST00000638237 IGKV5-2P06315 115 aa10.42□□□□□ -0.74
NECAP1-210ENST00000638237 CWC27Q6UX04 472 aaKnown RBP10.42□□□□□ -0.74
NECAP1-210ENST00000638237 LARP6Q9BRS8 491 aaKnown RBP10.42□□□□□ -0.74
NECAP1-210ENST00000638237 SPG7Q9UQ90 795 aa10.42□□□□□ -0.74
NECAP1-210ENST00000638237 USP16Q9Y5T5 823 aa10.42□□□□□ -0.74
NECAP1-210ENST00000638237 OVOS2A0A0G2JMS6 1433 aa10.42□□□□□ -0.74
NECAP1-210ENST00000638237 TATP17735 454 aaPredicted RBP10.42□□□□□ -0.74
NECAP1-210ENST00000638237 RIC3Q7Z5B4 369 aa10.42□□□□□ -0.74
NECAP1-210ENST00000638237 FAM184AQ8NB25 1140 aa10.42□□□□□ -0.74
NECAP1-210ENST00000638237 DDX21Q9NR30 783 aaKnown RBP eCLIP10.42□□□□□ -0.74
NECAP1-210ENST00000638237 GRM8O00222 908 aa10.41□□□□□ -0.74
NECAP1-210ENST00000638237 KIAA2012Q0VF49 1180 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms