RNA–Protein interactions for RNA: ENST00000638029.1

CACNA1A-258, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-258ENST00000638029 CCDC6Q16204 474 aa18.78■□□□□ 0.6
CACNA1A-258ENST00000638029 KIF5CO60282 957 aa18.78■□□□□ 0.6
CACNA1A-258ENST00000638029 KMT5BQ4FZB7 885 aa18.78■□□□□ 0.6
CACNA1A-258ENST00000638029 SMC1BQ8NDV3 1235 aa18.78■□□□□ 0.6
CACNA1A-258ENST00000638029 UBXN4Q92575 508 aa18.78■□□□□ 0.6
CACNA1A-258ENST00000638029 MNAT1P51948 309 aa18.78■□□□□ 0.6
CACNA1A-258ENST00000638029 MAP7D1Q3KQU3 841 aa18.78■□□□□ 0.6
CACNA1A-258ENST00000638029 FBF1Q8TES7 1133 aa18.78■□□□□ 0.6
CACNA1A-258ENST00000638029 ZNF692Q9BU19 519 aaPredicted RBP18.78■□□□□ 0.6
CACNA1A-258ENST00000638029 PFDN4Q9NQP4 134 aa18.78■□□□□ 0.6
CACNA1A-258ENST00000638029 KIF21BO75037 1637 aa18.78■□□□□ 0.6
CACNA1A-258ENST00000638029 ANKRD50Q9ULJ7 1429 aa18.78■□□□□ 0.6
CACNA1A-258ENST00000638029 NUP62CLQ9H1M0 184 aa18.77■□□□□ 0.6
CACNA1A-258ENST00000638029 SNX16P57768 344 aa18.77■□□□□ 0.6
CACNA1A-258ENST00000638029 CCDC117Q8IWD4 279 aaPredicted RBP18.77■□□□□ 0.6
CACNA1A-258ENST00000638029 ACTN2P35609 894 aa18.77■□□□□ 0.59
CACNA1A-258ENST00000638029 CCDC174Q6PII3 467 aa18.77■□□□□ 0.59
CACNA1A-258ENST00000638029 CTR9Q6PD62 1173 aa18.77■□□□□ 0.59
CACNA1A-258ENST00000638029 ZSWIM4Q9H7M6 989 aa18.77■□□□□ 0.59
CACNA1A-258ENST00000638029 EPSTI1Q96J88 318 aa18.76■□□□□ 0.59
CACNA1A-258ENST00000638029 GABPAQ06546 454 aa18.76■□□□□ 0.59
CACNA1A-258ENST00000638029 CFAP70Q5T0N1 1121 aa18.76■□□□□ 0.59
CACNA1A-258ENST00000638029 BANK1Q8NDB2 785 aa18.76■□□□□ 0.59
CACNA1A-258ENST00000638029 CABP5Q9NP86 173 aa18.76■□□□□ 0.59
CACNA1A-258ENST00000638029 GJA3Q9Y6H8 435 aa18.76■□□□□ 0.59
CACNA1A-258ENST00000638029 K7ELQ4 463 aaPredicted RBP18.76■□□□□ 0.59
CACNA1A-258ENST00000638029 NCBP1Q09161 790 aaKnown RBP18.76■□□□□ 0.59
CACNA1A-258ENST00000638029 SMTNL1A8MU46 457 aa18.76■□□□□ 0.59
CACNA1A-258ENST00000638029 RNF216Q9NWF9 866 aaPredicted RBP18.76■□□□□ 0.59
CACNA1A-258ENST00000638029 FGD5Q6ZNL6 1462 aa18.76■□□□□ 0.59
CACNA1A-258ENST00000638029 PICALMQ13492 652 aa18.75■□□□□ 0.59
CACNA1A-258ENST00000638029 CDCA7LQ96GN5 454 aa18.75■□□□□ 0.59
CACNA1A-258ENST00000638029 C6orf163Q5TEZ5 329 aa18.75■□□□□ 0.59
CACNA1A-258ENST00000638029 ATF7IPQ6VMQ6 1270 aa18.75■□□□□ 0.59
CACNA1A-258ENST00000638029 FGD6Q6ZV73 1430 aa18.75■□□□□ 0.59
CACNA1A-258ENST00000638029 SMIM23A6NLE4 172 aa18.75■□□□□ 0.59
CACNA1A-258ENST00000638029 PPP2R1AP30153 589 aa18.75■□□□□ 0.59
CACNA1A-258ENST00000638029 TAOK3Q9H2K8 898 aa18.75■□□□□ 0.59
CACNA1A-258ENST00000638029 RUSC2Q8N2Y8 1516 aa18.75■□□□□ 0.59
CACNA1A-258ENST00000638029 PPP4R4Q6NUP7 873 aa18.75■□□□□ 0.59
CACNA1A-258ENST00000638029 CETN1Q12798 172 aa18.74■□□□□ 0.59
CACNA1A-258ENST00000638029 NUTM1Q86Y26 1132 aa18.74■□□□□ 0.59
CACNA1A-258ENST00000638029 MYD88Q99836 296 aa18.74■□□□□ 0.59
CACNA1A-258ENST00000638029 PPP1R12AO14974 1030 aaPredicted RBP18.74■□□□□ 0.59
CACNA1A-258ENST00000638029 GEN1Q17RS7 908 aa18.74■□□□□ 0.59
CACNA1A-258ENST00000638029 USHBP1Q8N6Y0 703 aa18.74■□□□□ 0.59
CACNA1A-258ENST00000638029 CABP1Q9NZU7 370 aa18.74■□□□□ 0.59
CACNA1A-258ENST00000638029 KRT32Q14532 448 aa18.74■□□□□ 0.59
CACNA1A-258ENST00000638029 ACSBG1Q96GR2 724 aa18.74■□□□□ 0.59
CACNA1A-258ENST00000638029 ST5P78524 1137 aa18.74■□□□□ 0.59
CACNA1A-258ENST00000638029 PPP4R3BQ5MIZ7 849 aa18.74■□□□□ 0.59
CACNA1A-258ENST00000638029 FERMT3Q86UX7 667 aa18.74■□□□□ 0.59
CACNA1A-258ENST00000638029 PANK2Q9BZ23 570 aa18.74■□□□□ 0.59
CACNA1A-258ENST00000638029 RPUSD2Q8IZ73 545 aaKnown RBP18.74■□□□□ 0.59
CACNA1A-258ENST00000638029 TCHPQ9BT92 498 aa18.74■□□□□ 0.59
CACNA1A-258ENST00000638029 MTIF2P46199 727 aaKnown RBP18.73■□□□□ 0.59
CACNA1A-258ENST00000638029 NOD1Q9Y239 953 aa18.73■□□□□ 0.59
CACNA1A-258ENST00000638029 GSTA5Q7RTV2 222 aa18.73■□□□□ 0.59
CACNA1A-258ENST00000638029 MAP9Q49MG5 647 aa18.73■□□□□ 0.59
CACNA1A-258ENST00000638029 MICALCLQ6ZW33 695 aa18.73■□□□□ 0.59
CACNA1A-258ENST00000638029 RAB11FIP4Q86YS3 637 aa18.73■□□□□ 0.59
CACNA1A-258ENST00000638029 TRMT112Q9UI30 125 aaKnown RBP18.73■□□□□ 0.59
CACNA1A-258ENST00000638029 PRPF31Q8WWY3 499 aaKnown RBP18.73■□□□□ 0.59
CACNA1A-258ENST00000638029 BOLA2Q9H3K6 86 aa18.73■□□□□ 0.59
CACNA1A-258ENST00000638029 IFIT1P09914 478 aaKnown RBP18.73■□□□□ 0.59
CACNA1A-258ENST00000638029 PPP1R9BQ96SB3 815 aa18.73■□□□□ 0.59
CACNA1A-258ENST00000638029 RAB34Q9BZG1 259 aa18.73■□□□□ 0.59
CACNA1A-258ENST00000638029 JADE2Q9NQC1 790 aa18.73■□□□□ 0.59
CACNA1A-258ENST00000638029 CCDC65Q8IXS2 484 aa18.73■□□□□ 0.59
CACNA1A-258ENST00000638029 SREK1Q8WXA9 508 aaKnown RBP18.73■□□□□ 0.59
CACNA1A-258ENST00000638029 RTEL1-TNFRSF6BF6WH68 1400 aa18.72■□□□□ 0.59
CACNA1A-258ENST00000638029 CHD1LQ86WJ1 897 aa18.72■□□□□ 0.59
CACNA1A-258ENST00000638029 IQCA1Q86XH1 822 aa18.72■□□□□ 0.59
CACNA1A-258ENST00000638029 CTCFLQ8NI51 663 aaPredicted RBP18.72■□□□□ 0.59
CACNA1A-258ENST00000638029 SYCE3A1L190 88 aa18.72■□□□□ 0.59
CACNA1A-258ENST00000638029 IRX5P78411 483 aaPredicted RBP18.72■□□□□ 0.59
CACNA1A-258ENST00000638029 SEPT14Q6ZU15 432 aa18.72■□□□□ 0.59
CACNA1A-258ENST00000638029 HMGB2P26583 209 aaKnown RBP18.72■□□□□ 0.59
CACNA1A-258ENST00000638029 BIN1O00499 593 aa18.72■□□□□ 0.59
CACNA1A-258ENST00000638029 STX6O43752 255 aa18.72■□□□□ 0.59
CACNA1A-258ENST00000638029 IDEP14735 1019 aa18.72■□□□□ 0.59
CACNA1A-258ENST00000638029 RASA3Q14644 834 aa18.72■□□□□ 0.59
CACNA1A-258ENST00000638029 SLF2Q8IX21 1173 aa18.71■□□□□ 0.59
CACNA1A-258ENST00000638029 SLC12A7Q9Y666 1083 aa18.71■□□□□ 0.59
CACNA1A-258ENST00000638029 DNAAF4Q8WXU2 420 aa18.71■□□□□ 0.59
CACNA1A-258ENST00000638029 IQCGQ9H095 443 aaKnown RBP18.71■□□□□ 0.59
CACNA1A-258ENST00000638029 CCDC40Q4G0X9 1142 aa18.71■□□□□ 0.59
CACNA1A-258ENST00000638029 ANKLE2Q86XL3 938 aa18.71■□□□□ 0.59
CACNA1A-258ENST00000638029 SYNJ2O15056 1496 aa18.71■□□□□ 0.59
CACNA1A-258ENST00000638029 ERCC5P28715 1186 aaPredicted RBP18.71■□□□□ 0.58
CACNA1A-258ENST00000638029 CCT2P78371 535 aaKnown RBP18.71■□□□□ 0.58
CACNA1A-258ENST00000638029 CCDC83Q8IWF9 413 aa18.71■□□□□ 0.58
CACNA1A-258ENST00000638029 U3KPZ7 1027 aaPredicted RBP18.71■□□□□ 0.58
CACNA1A-258ENST00000638029 PAFAH1B1P43034 410 aa18.7■□□□□ 0.58
CACNA1A-258ENST00000638029 IRX3P78415 501 aaPredicted RBP18.7■□□□□ 0.58
CACNA1A-258ENST00000638029 WAPLQ7Z5K2 1190 aa18.7■□□□□ 0.58
CACNA1A-258ENST00000638029 NACA2Q9H009 215 aa18.7■□□□□ 0.58
CACNA1A-258ENST00000638029 SLC12A5Q9H2X9 1139 aa18.7■□□□□ 0.58
CACNA1A-258ENST00000638029 GNAT3A8MTJ3 354 aa18.7■□□□□ 0.58
CACNA1A-258ENST00000638029 FGFR1OPO95684 399 aaKnown RBP18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms