RNA–Protein interactions for RNA: ENST00000637667.1

CLN6-222, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 874 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-222ENST00000637667 KDM2BQ8NHM5 1336 aa26.48■■□□□ 1.83
CLN6-222ENST00000637667 MYBBP1AQ9BQG0 1328 aaKnown RBP26.48■■□□□ 1.83
CLN6-222ENST00000637667 ZC3H4Q9UPT8 1303 aaKnown RBP26.47■■□□□ 1.83
CLN6-222ENST00000637667 NFKBIEO00221 500 aa26.47■■□□□ 1.83
CLN6-222ENST00000637667 PRELPP51888 382 aa26.47■■□□□ 1.83
CLN6-222ENST00000637667 NIP7Q9Y221 180 aaKnown RBP eCLIP26.47■■□□□ 1.83
CLN6-222ENST00000637667 SBF1O95248 1867 aa26.47■■□□□ 1.83
CLN6-222ENST00000637667 KDM3BQ7LBC6 1761 aa26.46■■□□□ 1.83
CLN6-222ENST00000637667 SRGNP10124 158 aa26.46■■□□□ 1.83
CLN6-222ENST00000637667 RIPK4P57078 832 aa26.46■■□□□ 1.83
CLN6-222ENST00000637667 STYK1Q6J9G0 422 aa26.46■■□□□ 1.83
CLN6-222ENST00000637667 CNKSR1Q969H4 720 aa26.46■■□□□ 1.83
CLN6-222ENST00000637667 C21orf2O43822 256 aa26.45■■□□□ 1.82
CLN6-222ENST00000637667 HLFQ16534 295 aa26.45■■□□□ 1.82
CLN6-222ENST00000637667 ZNF219Q9P2Y4 722 aaPredicted RBP26.45■■□□□ 1.82
CLN6-222ENST00000637667 NGEFQ8N5V2 710 aa26.44■■□□□ 1.82
CLN6-222ENST00000637667 MASTLQ96GX5 879 aa26.44■■□□□ 1.82
CLN6-222ENST00000637667 COL11A2P13942 1736 aaPredicted RBP26.44■■□□□ 1.82
CLN6-222ENST00000637667 LAMB4A4D0S4 1761 aa26.43■■□□□ 1.82
CLN6-222ENST00000637667 TMPOP42166 694 aaKnown RBP26.43■■□□□ 1.82
CLN6-222ENST00000637667 TPTE2Q6XPS3 522 aa26.43■■□□□ 1.82
CLN6-222ENST00000637667 TSPYL4Q9UJ04 414 aa26.43■■□□□ 1.82
CLN6-222ENST00000637667 RRP7AQ9Y3A4 280 aaKnown RBP26.43■■□□□ 1.82
CLN6-222ENST00000637667 PRPF40BQ6NWY9 871 aaKnown RBP26.42■■□□□ 1.82
CLN6-222ENST00000637667 C16orf71Q8IYS4 520 aaPredicted RBP26.42■■□□□ 1.82
CLN6-222ENST00000637667 ERVV-1B6SEH8 477 aa26.41■■□□□ 1.82
CLN6-222ENST00000637667 LMOD3Q0VAK6 560 aa26.41■■□□□ 1.82
CLN6-222ENST00000637667 RBM46Q8TBY0 533 aaKnown RBP26.41■■□□□ 1.82
CLN6-222ENST00000637667 RRAGCQ9HB90 399 aa26.41■■□□□ 1.82
CLN6-222ENST00000637667 FAM177BA6PVY3 158 aa26.4■■□□□ 1.82
CLN6-222ENST00000637667 MAP3K15Q6ZN16 1313 aa26.39■■□□□ 1.82
CLN6-222ENST00000637667 KLRG2A4D1S0 409 aaPredicted RBP26.39■■□□□ 1.82
CLN6-222ENST00000637667 MYL6BP14649 208 aa26.39■■□□□ 1.82
CLN6-222ENST00000637667 KIF6Q6ZMV9 814 aa26.39■■□□□ 1.82
CLN6-222ENST00000637667 TTLL7Q6ZT98 887 aa26.39■■□□□ 1.82
CLN6-222ENST00000637667 CCDC146Q8IYE0 955 aa26.39■■□□□ 1.82
CLN6-222ENST00000637667 BABAM1Q9NWV8 329 aa26.39■■□□□ 1.82
CLN6-222ENST00000637667 ERBB4Q15303 1308 aa26.39■■□□□ 1.81
CLN6-222ENST00000637667 GLTPD2A6NH11 291 aa26.38■■□□□ 1.81
CLN6-222ENST00000637667 NPR1P16066 1061 aa26.38■■□□□ 1.81
CLN6-222ENST00000637667 SOGA3Q5TF21 947 aa26.38■■□□□ 1.81
CLN6-222ENST00000637667 LTBP3Q9NS15 1303 aa26.38■■□□□ 1.81
CLN6-222ENST00000637667 WDR43Q15061 677 aaKnown RBP eCLIP26.37■■□□□ 1.81
CLN6-222ENST00000637667 TAOK3Q9H2K8 898 aa26.37■■□□□ 1.81
CLN6-222ENST00000637667 GTF2E1P29083 439 aaPredicted RBP26.36■■□□□ 1.81
CLN6-222ENST00000637667 APLP1P51693 650 aa26.36■■□□□ 1.81
CLN6-222ENST00000637667 SLX4Q8IY92 1834 aa26.35■■□□□ 1.81
CLN6-222ENST00000637667 NYXQ9GZU5 481 aa26.35■■□□□ 1.81
CLN6-222ENST00000637667 ZBTB3Q9H5J0 574 aa26.35■■□□□ 1.81
CLN6-222ENST00000637667 FSTL1Q12841 308 aa26.34■■□□□ 1.81
CLN6-222ENST00000637667 NEUROD2Q15784 382 aa26.34■■□□□ 1.81
CLN6-222ENST00000637667 ERFEQ4G0M1 354 aa26.34■■□□□ 1.81
CLN6-222ENST00000637667 C7orf43Q8WVR3 580 aa26.34■■□□□ 1.81
CLN6-222ENST00000637667 RUNDC1Q96C34 613 aa26.34■■□□□ 1.81
CLN6-222ENST00000637667 EIF2S2P20042 333 aaKnown RBP26.33■■□□□ 1.81
CLN6-222ENST00000637667 TNRC6CQ9HCJ0 1690 aaKnown RBP26.33■■□□□ 1.81
CLN6-222ENST00000637667 FER1L6Q2WGJ9 1857 aa26.32■■□□□ 1.8
CLN6-222ENST00000637667 GPTP24298 496 aa26.32■■□□□ 1.8
CLN6-222ENST00000637667 PRKRIP1Q9H875 184 aaPredicted RBP26.32■■□□□ 1.8
CLN6-222ENST00000637667 ADAMTS8Q9UP79 889 aa26.32■■□□□ 1.8
CLN6-222ENST00000637667 ABCC12Q96J65 1359 aa26.32■■□□□ 1.8
CLN6-222ENST00000637667 VEGFAP15692 232 aaPredicted RBP26.31■■□□□ 1.8
CLN6-222ENST00000637667 PDIA6Q15084 440 aa26.31■■□□□ 1.8
CLN6-222ENST00000637667 CCDC93Q567U6 631 aa26.31■■□□□ 1.8
CLN6-222ENST00000637667 LRP10Q7Z4F1 713 aa26.31■■□□□ 1.8
CLN6-222ENST00000637667 NUTM1Q86Y26 1132 aa26.31■■□□□ 1.8
CLN6-222ENST00000637667 DPY19L2Q6NUT2 758 aa26.3■■□□□ 1.8
CLN6-222ENST00000637667 GIGYF2Q6Y7W6 1299 aaKnown RBP26.3■■□□□ 1.8
CLN6-222ENST00000637667 TRIM35Q9UPQ4 493 aa26.3■■□□□ 1.8
CLN6-222ENST00000637667 UBN2Q6ZU65 1347 aa26.3■■□□□ 1.8
CLN6-222ENST00000637667 TIAM2Q8IVF5 1701 aa26.3■■□□□ 1.8
CLN6-222ENST00000637667 IBTKQ9P2D0 1353 aaPredicted RBP26.3■■□□□ 1.8
CLN6-222ENST00000637667 CCDC88AQ3V6T2 1871 aa26.3■■□□□ 1.8
CLN6-222ENST00000637667 CHL1O00533 1208 aa26.29■■□□□ 1.8
CLN6-222ENST00000637667 PROSER3Q2NL68 480 aa26.29■■□□□ 1.8
CLN6-222ENST00000637667 ZNF34Q8IZ26 560 aa26.29■■□□□ 1.8
CLN6-222ENST00000637667 ARFGEF2Q9Y6D5 1785 aa26.28■■□□□ 1.8
CLN6-222ENST00000637667 ALDH1B1P30837 517 aa26.28■■□□□ 1.8
CLN6-222ENST00000637667 CRY2Q49AN0 593 aa26.28■■□□□ 1.8
CLN6-222ENST00000637667 SUSD4Q5VX71 490 aa26.28■■□□□ 1.8
CLN6-222ENST00000637667 SMC1BQ8NDV3 1235 aa26.28■■□□□ 1.8
CLN6-222ENST00000637667 ANXA1P04083 346 aa26.27■■□□□ 1.8
CLN6-222ENST00000637667 NUP98P52948 1817 aa26.27■■□□□ 1.8
CLN6-222ENST00000637667 CACNA1SQ13698 1873 aa26.26■■□□□ 1.79
CLN6-222ENST00000637667 OLFM4Q6UX06 510 aa26.26■■□□□ 1.79
CLN6-222ENST00000637667 LAS1LQ9Y4W2 734 aaKnown RBP26.26■■□□□ 1.79
CLN6-222ENST00000637667 POTECB2RU33 542 aa26.25■■□□□ 1.79
CLN6-222ENST00000637667 FKBP4Q02790 459 aaKnown RBP eCLIP26.25■■□□□ 1.79
CLN6-222ENST00000637667 RTKN2Q8IZC4 609 aa26.25■■□□□ 1.79
CLN6-222ENST00000637667 NECTIN2Q92692 538 aa26.25■■□□□ 1.79
CLN6-222ENST00000637667 RIC1Q4ADV7 1423 aa26.24■■□□□ 1.79
CLN6-222ENST00000637667 NTSR2O95665 410 aa26.24■■□□□ 1.79
CLN6-222ENST00000637667 KRT24Q2M2I5 525 aa26.24■■□□□ 1.79
CLN6-222ENST00000637667 PARP10Q53GL7 1025 aa26.24■■□□□ 1.79
CLN6-222ENST00000637667 DICER1Q9UPY3 1922 aaKnown RBP26.24■■□□□ 1.79
CLN6-222ENST00000637667 PPP1R42Q7Z4L9 355 aa26.23■■□□□ 1.79
CLN6-222ENST00000637667 DNAJC5GQ8N7S2 189 aa26.23■■□□□ 1.79
CLN6-222ENST00000637667 HOXA10P31260 410 aaPredicted RBP26.22■■□□□ 1.79
CLN6-222ENST00000637667 COPS6Q7L5N1 327 aa26.22■■□□□ 1.79
CLN6-222ENST00000637667 RPGRQ92834 1020 aaKnown RBP26.22■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms