RNA–Protein interactions for RNA: ENST00000637613.1

CHD2-228, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-228ENST00000637613 COL17A1Q9UMD9 1497 aaPredicted RBP6.25□□□□□ -1.41
CHD2-228ENST00000637613 SPDYE3A6NKU9 549 aa6.24□□□□□ -1.41
CHD2-228ENST00000637613 SSFA2P28290 1259 aa6.24□□□□□ -1.41
CHD2-228ENST00000637613 PGBD3Q8N328 593 aa6.24□□□□□ -1.41
CHD2-228ENST00000637613 SLAIN2Q9P270 581 aa6.24□□□□□ -1.41
CHD2-228ENST00000637613 NOVA2Q9UNW9 492 aaKnown RBP6.24□□□□□ -1.41
CHD2-228ENST00000637613 USP17L5A8MUK1 530 aa6.23□□□□□ -1.41
CHD2-228ENST00000637613 BNIP3LO60238 219 aa6.23□□□□□ -1.41
CHD2-228ENST00000637613 PRRT3Q5FWE3 981 aa6.23□□□□□ -1.41
CHD2-228ENST00000637613 LZTS3O60299 673 aaPredicted RBP6.22□□□□□ -1.41
CHD2-228ENST00000637613 ADH6P28332 368 aa6.22□□□□□ -1.41
CHD2-228ENST00000637613 MCCD1P59942 119 aaPredicted RBP6.22□□□□□ -1.41
CHD2-228ENST00000637613 ERVK-9P63128 1117 aa6.22□□□□□ -1.41
CHD2-228ENST00000637613 PTK7Q13308 1070 aa6.22□□□□□ -1.41
CHD2-228ENST00000637613 FZD5Q13467 585 aa6.22□□□□□ -1.41
CHD2-228ENST00000637613 CRTC2Q53ET0 693 aaPredicted RBP6.22□□□□□ -1.41
CHD2-228ENST00000637613 EFHC2Q5JST6 749 aa6.22□□□□□ -1.41
CHD2-228ENST00000637613 CLP1Q92989 425 aaKnown RBP6.22□□□□□ -1.41
CHD2-228ENST00000637613 CEP126Q9P2H0 1117 aa6.22□□□□□ -1.41
CHD2-228ENST00000637613 RBM47A0AV96 593 aaKnown RBP6.21□□□□□ -1.42
CHD2-228ENST00000637613 USP17L15C9J2P7 530 aa6.21□□□□□ -1.42
CHD2-228ENST00000637613 USP17L10C9JJH3 530 aa6.21□□□□□ -1.42
CHD2-228ENST00000637613 USP17L13C9JLJ4 530 aa6.21□□□□□ -1.42
CHD2-228ENST00000637613 USP17L12C9JPN9 530 aa6.21□□□□□ -1.42
CHD2-228ENST00000637613 USP17L11C9JVI0 530 aa6.21□□□□□ -1.42
CHD2-228ENST00000637613 USP17L21D6R901 530 aa6.21□□□□□ -1.42
CHD2-228ENST00000637613 USP17L18D6R9N7 530 aa6.21□□□□□ -1.42
CHD2-228ENST00000637613 USP17L22D6RA61 530 aa6.21□□□□□ -1.42
CHD2-228ENST00000637613 USP17L17D6RBQ6 530 aa6.21□□□□□ -1.42
CHD2-228ENST00000637613 USP17L19D6RCP7 530 aa6.21□□□□□ -1.42
CHD2-228ENST00000637613 USP17L20D6RJB6 530 aa6.21□□□□□ -1.42
CHD2-228ENST00000637613 SKIP12755 728 aa6.21□□□□□ -1.42
CHD2-228ENST00000637613 USP17L24Q0WX57 530 aa6.21□□□□□ -1.42
CHD2-228ENST00000637613 DNAJC14Q6Y2X3 702 aaPredicted RBP6.21□□□□□ -1.42
CHD2-228ENST00000637613 CYP2U1Q7Z449 544 aa6.21□□□□□ -1.42
CHD2-228ENST00000637613 CCDC125Q86Z20 511 aa6.21□□□□□ -1.42
CHD2-228ENST00000637613 CCER1Q8TC90 406 aaPredicted RBP6.21□□□□□ -1.42
CHD2-228ENST00000637613 NACC1Q96RE7 527 aa6.21□□□□□ -1.42
CHD2-228ENST00000637613 RUBCNLQ9H714 662 aa6.21□□□□□ -1.42
CHD2-228ENST00000637613 AVENQ9NQS1 362 aaPredicted RBP6.21□□□□□ -1.42
CHD2-228ENST00000637613 ARID4AP29374 1257 aaPredicted RBP6.2□□□□□ -1.42
CHD2-228ENST00000637613 CC2D2BQ6DHV5 1058 aa6.2□□□□□ -1.42
CHD2-228ENST00000637613 CDCA7Q9BWT1 371 aaPredicted RBP6.2□□□□□ -1.42
CHD2-228ENST00000637613 IGSF5Q9NSI5 407 aa6.2□□□□□ -1.42
CHD2-228ENST00000637613 MKRN1Q9UHC7 482 aaKnown RBP6.2□□□□□ -1.42
CHD2-228ENST00000637613 KLF15Q9UIH9 416 aa6.2□□□□□ -1.42
CHD2-228ENST00000637613 UNCXA6NJT0 531 aa6.19□□□□□ -1.42
CHD2-228ENST00000637613 ELNP15502 786 aa6.19□□□□□ -1.42
CHD2-228ENST00000637613 ERCC3P19447 782 aa6.19□□□□□ -1.42
CHD2-228ENST00000637613 FCHSD1Q86WN1 690 aa6.19□□□□□ -1.42
CHD2-228ENST00000637613 ZNF592Q92610 1267 aa6.19□□□□□ -1.42
CHD2-228ENST00000637613 IGSF3O75054 1194 aa6.18□□□□□ -1.42
CHD2-228ENST00000637613 DKK1O94907 266 aa6.18□□□□□ -1.42
CHD2-228ENST00000637613 PHKA2P46019 1235 aa6.18□□□□□ -1.42
CHD2-228ENST00000637613 NCOA4Q13772 614 aa6.18□□□□□ -1.42
CHD2-228ENST00000637613 NOM1Q5C9Z4 860 aaKnown RBP6.18□□□□□ -1.42
CHD2-228ENST00000637613 DEPDC4Q8N2C3 294 aa6.18□□□□□ -1.42
CHD2-228ENST00000637613 C1orf216Q8TAB5 229 aa6.18□□□□□ -1.42
CHD2-228ENST00000637613 ARHGEF10LQ9HCE6 1279 aa6.18□□□□□ -1.42
CHD2-228ENST00000637613 SOWAHDA6NJG2 315 aa6.17□□□□□ -1.42
CHD2-228ENST00000637613 MSX1P28360 303 aa6.17□□□□□ -1.42
CHD2-228ENST00000637613 SWI5Q1ZZU3 235 aa6.17□□□□□ -1.42
CHD2-228ENST00000637613 MAP7D1Q3KQU3 841 aa6.17□□□□□ -1.42
CHD2-228ENST00000637613 FIGNL1Q6PIW4 674 aa6.17□□□□□ -1.42
CHD2-228ENST00000637613 ANKMY2Q8IV38 441 aa6.17□□□□□ -1.42
CHD2-228ENST00000637613 FAM200AQ8TCP9 573 aa6.17□□□□□ -1.42
CHD2-228ENST00000637613 CRISPLD1Q9H336 500 aa6.17□□□□□ -1.42
CHD2-228ENST00000637613 RASA1P20936 1047 aa6.16□□□□□ -1.42
CHD2-228ENST00000637613 SLFNL1Q499Z3 407 aa6.16□□□□□ -1.42
CHD2-228ENST00000637613 FAM182BQ5T319 152 aa6.16□□□□□ -1.42
CHD2-228ENST00000637613 LARP1Q6PKG0 1096 aaKnown RBP6.16□□□□□ -1.42
CHD2-228ENST00000637613 PLPP7Q8NBV4 271 aa6.16□□□□□ -1.42
CHD2-228ENST00000637613 LOC105371045A0A1W2PR82 267 aa6.15□□□□□ -1.42
CHD2-228ENST00000637613 GIGYF1O75420 1035 aaPredicted RBP6.15□□□□□ -1.42
CHD2-228ENST00000637613 CLDN10P78369 228 aa6.15□□□□□ -1.42
CHD2-228ENST00000637613 CENPCQ03188 943 aa6.15□□□□□ -1.42
CHD2-228ENST00000637613 ESYT1Q9BSJ8 1104 aa6.15□□□□□ -1.42
CHD2-228ENST00000637613 PCDHGC4Q9Y5F7 938 aa6.15□□□□□ -1.42
CHD2-228ENST00000637613 ZBTB7BO15156 539 aaPredicted RBP6.14□□□□□ -1.43
CHD2-228ENST00000637613 GNASQ5JWF2 1037 aa6.14□□□□□ -1.43
CHD2-228ENST00000637613 OGFOD1Q8N543 542 aa6.14□□□□□ -1.43
CHD2-228ENST00000637613 CNKSR1Q969H4 720 aa6.14□□□□□ -1.43
CHD2-228ENST00000637613 ZSCAN10Q96SZ4 725 aaPredicted RBP6.14□□□□□ -1.43
CHD2-228ENST00000637613 DNAAF2Q9NVR5 837 aaKnown RBP6.14□□□□□ -1.43
CHD2-228ENST00000637613 RNF112Q9ULX5 631 aa6.14□□□□□ -1.43
CHD2-228ENST00000637613 ATP2B4P23634 1241 aa6.13□□□□□ -1.43
CHD2-228ENST00000637613 DPYDQ12882 1025 aa6.13□□□□□ -1.43
CHD2-228ENST00000637613 TRIM28Q13263 835 aaKnown RBP6.13□□□□□ -1.43
CHD2-228ENST00000637613 TSGA10IPQ3SY00 556 aa6.13□□□□□ -1.43
CHD2-228ENST00000637613 C4orf17Q53FE4 359 aa6.13□□□□□ -1.43
CHD2-228ENST00000637613 SIX5Q8N196 739 aa6.13□□□□□ -1.43
CHD2-228ENST00000637613 LARGE2Q8N3Y3 721 aa6.13□□□□□ -1.43
CHD2-228ENST00000637613 OSBPL3Q9H4L5 887 aa6.13□□□□□ -1.43
CHD2-228ENST00000637613 KIAA1522Q9P206 1035 aaPredicted RBP6.13□□□□□ -1.43
CHD2-228ENST00000637613 C9orf172C9J069 976 aa6.12□□□□□ -1.43
CHD2-228ENST00000637613 FAM229AH3BQW9 127 aa6.12□□□□□ -1.43
CHD2-228ENST00000637613 GNRH1P01148 92 aa6.12□□□□□ -1.43
CHD2-228ENST00000637613 GTF2E1P29083 439 aaPredicted RBP6.12□□□□□ -1.43
CHD2-228ENST00000637613 SCTRP47872 440 aa6.12□□□□□ -1.43
CHD2-228ENST00000637613 SERPINB4P48594 390 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms