RNA–Protein interactions for RNA: ENST00000637572.1

CHD2-227, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,452 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-227ENST00000637572 SPON1Q9HCB6 807 aa6.67□□□□□ -1.34
CHD2-227ENST00000637572 ANO2Q9NQ90 1003 aa6.67□□□□□ -1.34
CHD2-227ENST00000637572 TOMM22Q9NS69 142 aa6.67□□□□□ -1.34
CHD2-227ENST00000637572 TTC39AQ5SRH9 613 aa6.66□□□□□ -1.34
CHD2-227ENST00000637572 DDX17Q92841 729 aaKnown RBP6.66□□□□□ -1.34
CHD2-227ENST00000637572 IGSF1Q8N6C5 1336 aa6.66□□□□□ -1.34
CHD2-227ENST00000637572 VAMP4O75379 141 aa6.66□□□□□ -1.34
CHD2-227ENST00000637572 IFIT5Q13325 482 aaKnown RBP6.66□□□□□ -1.34
CHD2-227ENST00000637572 FOXD4L5Q5VV16 416 aaPredicted RBP6.66□□□□□ -1.34
CHD2-227ENST00000637572 FOXD4L4Q8WXT5 416 aaPredicted RBP6.66□□□□□ -1.34
CHD2-227ENST00000637572 ADAMTS13Q76LX8 1427 aa6.66□□□□□ -1.34
CHD2-227ENST00000637572 ERBB4Q15303 1308 aa6.66□□□□□ -1.34
CHD2-227ENST00000637572 SPATA31A3Q5VYP0 1347 aa6.66□□□□□ -1.34
CHD2-227ENST00000637572 GLRX3O76003 335 aaKnown RBP6.66□□□□□ -1.34
CHD2-227ENST00000637572 FAM182BQ5T319 152 aa6.66□□□□□ -1.34
CHD2-227ENST00000637572 MRPL50Q8N5N7 158 aaKnown RBP6.66□□□□□ -1.34
CHD2-227ENST00000637572 LINS1Q8NG48 757 aa6.66□□□□□ -1.34
CHD2-227ENST00000637572 SYAP1Q96A49 352 aaPredicted RBP6.66□□□□□ -1.34
CHD2-227ENST00000637572 DDX21Q9NR30 783 aaKnown RBP eCLIP6.66□□□□□ -1.34
CHD2-227ENST00000637572 ISY1Q9ULR0 285 aaKnown RBP6.66□□□□□ -1.34
CHD2-227ENST00000637572 ERICH2A1L162 156 aa6.66□□□□□ -1.34
CHD2-227ENST00000637572 SLC3A2P08195 630 aaKnown RBP6.66□□□□□ -1.34
CHD2-227ENST00000637572 EN1Q05925 392 aaPredicted RBP6.66□□□□□ -1.34
CHD2-227ENST00000637572 FAM98CQ17RN3 349 aaKnown RBP6.66□□□□□ -1.34
CHD2-227ENST00000637572 NBPF6Q5VWK0 638 aa6.66□□□□□ -1.34
CHD2-227ENST00000637572 NBPF4Q96M43 638 aa6.66□□□□□ -1.34
CHD2-227ENST00000637572 CDC5LQ99459 802 aaKnown RBP6.66□□□□□ -1.34
CHD2-227ENST00000637572 TRMT112Q9UI30 125 aaKnown RBP6.66□□□□□ -1.34
CHD2-227ENST00000637572 MAP3K2Q9Y2U5 619 aa6.66□□□□□ -1.34
CHD2-227ENST00000637572 RIMS1Q86UR5 1692 aaKnown RBP6.65□□□□□ -1.34
CHD2-227ENST00000637572 PI4KAP2A4QPH2 592 aa6.65□□□□□ -1.34
CHD2-227ENST00000637572 APPP05067 770 aa6.65□□□□□ -1.34
CHD2-227ENST00000637572 IFIT1P09914 478 aaKnown RBP6.65□□□□□ -1.34
CHD2-227ENST00000637572 AKAP17AQ02040 695 aaKnown RBP6.65□□□□□ -1.34
CHD2-227ENST00000637572 BRINP3Q76B58 766 aa6.65□□□□□ -1.34
CHD2-227ENST00000637572 PI4KAP1Q8N8J0 262 aa6.65□□□□□ -1.34
CHD2-227ENST00000637572 NFATC2IPQ8NCF5 419 aa6.65□□□□□ -1.34
CHD2-227ENST00000637572 SLC52A2Q9HAB3 445 aa6.65□□□□□ -1.34
CHD2-227ENST00000637572 THRAP3Q9Y2W1 955 aaKnown RBP6.65□□□□□ -1.34
CHD2-227ENST00000637572 ANKRD18BA2A2Z9 1011 aa6.65□□□□□ -1.34
CHD2-227ENST00000637572 HDAC1Q13547 482 aaPredicted RBP6.65□□□□□ -1.34
CHD2-227ENST00000637572 WASHC4Q2M389 1173 aa6.65□□□□□ -1.34
CHD2-227ENST00000637572 ZNF790Q6PG37 636 aa6.65□□□□□ -1.34
CHD2-227ENST00000637572 RALYLQ86SE5 291 aaKnown RBP6.65□□□□□ -1.34
CHD2-227ENST00000637572 DCCP43146 1447 aa6.65□□□□□ -1.35
CHD2-227ENST00000637572 KRT27Q7Z3Y8 459 aa6.65□□□□□ -1.35
CHD2-227ENST00000637572 NACAP1Q9BZK3 213 aa6.65□□□□□ -1.35
CHD2-227ENST00000637572 NYXQ9GZU5 481 aa6.65□□□□□ -1.35
CHD2-227ENST00000637572 WDR17Q8IZU2 1322 aa6.65□□□□□ -1.35
CHD2-227ENST00000637572 FAM177BA6PVY3 158 aa6.64□□□□□ -1.35
CHD2-227ENST00000637572 ATP6V1AP38606 617 aa6.64□□□□□ -1.35
CHD2-227ENST00000637572 C22orf23Q9BZE7 217 aa6.64□□□□□ -1.35
CHD2-227ENST00000637572 RFC4P35249 363 aa6.64□□□□□ -1.35
CHD2-227ENST00000637572 SART3Q15020 963 aaKnown RBP6.64□□□□□ -1.35
CHD2-227ENST00000637572 AACSQ86V21 672 aa6.64□□□□□ -1.35
CHD2-227ENST00000637572 C8orf58Q8NAV2 365 aa6.64□□□□□ -1.35
CHD2-227ENST00000637572 FBXW7Q969H0 707 aa6.64□□□□□ -1.35
CHD2-227ENST00000637572 STK32BQ9NY57 414 aa6.64□□□□□ -1.35
CHD2-227ENST00000637572 SPATA31A6Q5VVP1 1343 aa6.64□□□□□ -1.35
CHD2-227ENST00000637572 CHPF2Q9P2E5 772 aa6.64□□□□□ -1.35
CHD2-227ENST00000637572 CTNNA3Q9UI47 895 aa6.64□□□□□ -1.35
CHD2-227ENST00000637572 SLIT1O75093 1534 aa6.64□□□□□ -1.35
CHD2-227ENST00000637572 TNS3Q68CZ2 1445 aa6.64□□□□□ -1.35
CHD2-227ENST00000637572 FAM184AQ8NB25 1140 aa6.64□□□□□ -1.35
CHD2-227ENST00000637572 TRIM35Q9UPQ4 493 aa6.64□□□□□ -1.35
CHD2-227ENST00000637572 ERBB3P21860 1342 aa6.63□□□□□ -1.35
CHD2-227ENST00000637572 CPSF1Q10570 1443 aaKnown RBP6.63□□□□□ -1.35
CHD2-227ENST00000637572 GOLGA6L6A8MZA4 724 aa6.63□□□□□ -1.35
CHD2-227ENST00000637572 CACNB1Q02641 598 aaPredicted RBP6.63□□□□□ -1.35
CHD2-227ENST00000637572 CAVIN4Q5BKX8 364 aa6.63□□□□□ -1.35
CHD2-227ENST00000637572 METTL24Q5JXM2 366 aa6.63□□□□□ -1.35
CHD2-227ENST00000637572 XAGE3Q8WTP9 111 aa6.63□□□□□ -1.35
CHD2-227ENST00000637572 QRICH2Q9H0J4 1663 aa6.63□□□□□ -1.35
CHD2-227ENST00000637572 RABEP1Q15276 862 aa6.63□□□□□ -1.35
CHD2-227ENST00000637572 CCDC152Q4G0S7 254 aa6.63□□□□□ -1.35
CHD2-227ENST00000637572 PARP10Q53GL7 1025 aa6.63□□□□□ -1.35
CHD2-227ENST00000637572 COPS6Q7L5N1 327 aa6.63□□□□□ -1.35
CHD2-227ENST00000637572 CCDC125Q86Z20 511 aa6.63□□□□□ -1.35
CHD2-227ENST00000637572 POLR3EQ9NVU0 708 aa6.63□□□□□ -1.35
CHD2-227ENST00000637572 GRM8O00222 908 aa6.63□□□□□ -1.35
CHD2-227ENST00000637572 PHKG2P15735 406 aa6.63□□□□□ -1.35
CHD2-227ENST00000637572 GRM1Q13255 1194 aa6.63□□□□□ -1.35
CHD2-227ENST00000637572 SEPT12Q8IYM1 358 aa6.63□□□□□ -1.35
CHD2-227ENST00000637572 CCDC102AQ96A19 550 aa6.63□□□□□ -1.35
CHD2-227ENST00000637572 RTCBQ9Y3I0 505 aaKnown RBP6.63□□□□□ -1.35
CHD2-227ENST00000637572 LRRFIP2Q9Y608 721 aaKnown RBP6.63□□□□□ -1.35
CHD2-227ENST00000637572 TMEM131LA2VDJ0 1609 aa6.63□□□□□ -1.35
CHD2-227ENST00000637572 C1orf167Q5SNV9 1468 aa6.63□□□□□ -1.35
CHD2-227ENST00000637572 F6X3S4 739 aa6.62□□□□□ -1.35
CHD2-227ENST00000637572 CPLX1O14810 134 aa6.62□□□□□ -1.35
CHD2-227ENST00000637572 NRDCO43847 1150 aa6.62□□□□□ -1.35
CHD2-227ENST00000637572 SLC5A1P13866 664 aa6.62□□□□□ -1.35
CHD2-227ENST00000637572 MX1P20591 662 aa6.62□□□□□ -1.35
CHD2-227ENST00000637572 MNX1P50219 401 aaPredicted RBP6.62□□□□□ -1.35
CHD2-227ENST00000637572 ST5P78524 1137 aa6.62□□□□□ -1.35
CHD2-227ENST00000637572 KRT32Q14532 448 aa6.62□□□□□ -1.35
CHD2-227ENST00000637572 DNAJC2Q99543 621 aaKnown RBP6.62□□□□□ -1.35
CHD2-227ENST00000637572 ZBTB3Q9H5J0 574 aa6.62□□□□□ -1.35
CHD2-227ENST00000637572 MYO3AQ8NEV4 1616 aa6.62□□□□□ -1.35
CHD2-227ENST00000637572 NCAPD2Q15021 1401 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms