RNA–Protein interactions for RNA: ENST00000636881.1

CHD2-226, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 3,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-226ENST00000636881 ZBTB22O15209 634 aa10.09□□□□□ -0.79
CHD2-226ENST00000636881 ZNF165P49910 485 aa10.09□□□□□ -0.79
CHD2-226ENST00000636881 PTPN14Q15678 1187 aa10.09□□□□□ -0.79
CHD2-226ENST00000636881 FAM173BQ6P4H8 233 aa10.09□□□□□ -0.79
CHD2-226ENST00000636881 PLA2G4DQ86XP0 818 aa10.09□□□□□ -0.79
CHD2-226ENST00000636881 NECAB1Q8N987 351 aa10.09□□□□□ -0.79
CHD2-226ENST00000636881 BICD2Q8TD16 824 aa10.09□□□□□ -0.79
CHD2-226ENST00000636881 RUFY2Q8WXA3 655 aa10.09□□□□□ -0.79
CHD2-226ENST00000636881 DDX19AQ9NUU7 478 aaKnown RBP10.09□□□□□ -0.79
CHD2-226ENST00000636881 CCDC171Q6TFL3 1326 aa10.09□□□□□ -0.79
CHD2-226ENST00000636881 PDE4CQ08493 712 aa10.09□□□□□ -0.79
CHD2-226ENST00000636881 VPS53Q5VIR6 699 aa10.09□□□□□ -0.79
CHD2-226ENST00000636881 PRPF40BQ6NWY9 871 aaKnown RBP10.09□□□□□ -0.79
CHD2-226ENST00000636881 DDX54Q8TDD1 881 aaKnown RBP10.09□□□□□ -0.79
CHD2-226ENST00000636881 SPATA32Q96LK8 384 aa10.09□□□□□ -0.79
CHD2-226ENST00000636881 RAB11FIP3O75154 756 aa10.08□□□□□ -0.8
CHD2-226ENST00000636881 TDRD7Q8NHU6 1098 aaKnown RBP10.08□□□□□ -0.8
CHD2-226ENST00000636881 TIGD1Q96MW7 591 aa10.08□□□□□ -0.8
CHD2-226ENST00000636881 DNAJC25Q9H1X3 360 aa10.08□□□□□ -0.8
CHD2-226ENST00000636881 SOS1Q07889 1333 aaPredicted RBP10.08□□□□□ -0.8
CHD2-226ENST00000636881 TFIP11Q9UBB9 837 aaKnown RBP10.08□□□□□ -0.8
CHD2-226ENST00000636881 ZNF215Q9UL58 517 aaPredicted RBP10.08□□□□□ -0.8
CHD2-226ENST00000636881 PDCP20941 246 aa10.08□□□□□ -0.8
CHD2-226ENST00000636881 CCDC30Q5VVM6 783 aa10.08□□□□□ -0.8
CHD2-226ENST00000636881 RHPN1Q8TCX5 695 aa10.08□□□□□ -0.8
CHD2-226ENST00000636881 SCAND2PQ9GZW5 306 aaPredicted RBP10.08□□□□□ -0.8
CHD2-226ENST00000636881 PPP6R1Q9UPN7 881 aa10.08□□□□□ -0.8
CHD2-226ENST00000636881 MLH3Q9UHC1 1453 aa10.07□□□□□ -0.8
CHD2-226ENST00000636881 ZKSCAN1P17029 563 aaPredicted RBP10.07□□□□□ -0.8
CHD2-226ENST00000636881 OS9Q13438 667 aaPredicted RBP10.07□□□□□ -0.8
CHD2-226ENST00000636881 KMT5BQ4FZB7 885 aa10.07□□□□□ -0.8
CHD2-226ENST00000636881 CDC37L1Q7L3B6 337 aa10.07□□□□□ -0.8
CHD2-226ENST00000636881 CLSTN2Q9H4D0 955 aa10.07□□□□□ -0.8
CHD2-226ENST00000636881 ELP1O95163 1332 aa10.07□□□□□ -0.8
CHD2-226ENST00000636881 ALKQ9UM73 1620 aa10.07□□□□□ -0.8
CHD2-226ENST00000636881 VGLL3A8MV65 326 aa10.07□□□□□ -0.8
CHD2-226ENST00000636881 ME3Q16798 604 aa10.07□□□□□ -0.8
CHD2-226ENST00000636881 CCDC144BQ3MJ40 725 aa10.07□□□□□ -0.8
CHD2-226ENST00000636881 CCDC144CPQ8IYA2 1237 aa10.07□□□□□ -0.8
CHD2-226ENST00000636881 PI4K2BQ8TCG2 481 aa10.07□□□□□ -0.8
CHD2-226ENST00000636881 CALCOCO1Q9P1Z2 691 aa10.07□□□□□ -0.8
CHD2-226ENST00000636881 WASLO00401 505 aaPredicted RBP10.07□□□□□ -0.8
CHD2-226ENST00000636881 NEMFO60524 1076 aa10.07□□□□□ -0.8
CHD2-226ENST00000636881 ELF2Q15723 593 aa10.07□□□□□ -0.8
CHD2-226ENST00000636881 ADCK5Q3MIX3 580 aa10.07□□□□□ -0.8
CHD2-226ENST00000636881 KIF1BPQ96EK5 621 aa10.07□□□□□ -0.8
CHD2-226ENST00000636881 ERO1AQ96HE7 468 aa10.07□□□□□ -0.8
CHD2-226ENST00000636881 NPHP3Q7Z494 1330 aa10.07□□□□□ -0.8
CHD2-226ENST00000636881 CRB1P82279 1406 aa10.06□□□□□ -0.8
CHD2-226ENST00000636881 NPHP1O15259 732 aa10.06□□□□□ -0.8
CHD2-226ENST00000636881 PDIA4P13667 645 aaKnown RBP10.06□□□□□ -0.8
CHD2-226ENST00000636881 PPP1R42Q7Z4L9 355 aa10.06□□□□□ -0.8
CHD2-226ENST00000636881 TRMT1Q9NXH9 659 aaKnown RBP10.06□□□□□ -0.8
CHD2-226ENST00000636881 SOX12O15370 315 aa10.06□□□□□ -0.8
CHD2-226ENST00000636881 FOXO3O43524 673 aa10.06□□□□□ -0.8
CHD2-226ENST00000636881 LRRC8AQ8IWT6 810 aa10.06□□□□□ -0.8
CHD2-226ENST00000636881 NUDT16Q96DE0 195 aaKnown RBP10.06□□□□□ -0.8
CHD2-226ENST00000636881 ARHGEF10O15013 1369 aa10.06□□□□□ -0.8
CHD2-226ENST00000636881 SKILP12757 684 aa10.06□□□□□ -0.8
CHD2-226ENST00000636881 CDC25BP30305 580 aa10.06□□□□□ -0.8
CHD2-226ENST00000636881 IRX5P78411 483 aaPredicted RBP10.06□□□□□ -0.8
CHD2-226ENST00000636881 FBXO38Q6PIJ6 1188 aa10.06□□□□□ -0.8
CHD2-226ENST00000636881 SSH3Q8TE77 659 aa10.06□□□□□ -0.8
CHD2-226ENST00000636881 ZSWIM6Q9HCJ5 1215 aa10.06□□□□□ -0.8
CHD2-226ENST00000636881 NAP1L2Q9ULW6 460 aaPredicted RBP10.06□□□□□ -0.8
CHD2-226ENST00000636881 NCKAP5LQ9HCH0 1330 aa10.05□□□□□ -0.8
CHD2-226ENST00000636881 BECN2A8MW95 431 aa10.05□□□□□ -0.8
CHD2-226ENST00000636881 SLU7O95391 586 aaKnown RBP10.05□□□□□ -0.8
CHD2-226ENST00000636881 PTH1RQ03431 593 aa10.05□□□□□ -0.8
CHD2-226ENST00000636881 FILIP1Q7Z7B0 1213 aa10.05□□□□□ -0.8
CHD2-226ENST00000636881 TM6SF1Q9BZW5 370 aa10.05□□□□□ -0.8
CHD2-226ENST00000636881 CPS1P31327 1500 aa10.05□□□□□ -0.8
CHD2-226ENST00000636881 USP27XA6NNY8 438 aa10.05□□□□□ -0.8
CHD2-226ENST00000636881 SRGAP3O43295 1099 aa10.05□□□□□ -0.8
CHD2-226ENST00000636881 HTATSF1O43719 755 aaKnown RBP10.05□□□□□ -0.8
CHD2-226ENST00000636881 RNF20Q5VTR2 975 aa10.05□□□□□ -0.8
CHD2-226ENST00000636881 USP44Q9H0E7 712 aa10.05□□□□□ -0.8
CHD2-226ENST00000636881 TTC21AQ8NDW8 1320 aa10.04□□□□□ -0.8
CHD2-226ENST00000636881 GLRX3O76003 335 aaKnown RBP10.04□□□□□ -0.8
CHD2-226ENST00000636881 ST3GAL1Q11201 340 aa10.04□□□□□ -0.8
CHD2-226ENST00000636881 LEO1Q8WVC0 666 aaPredicted RBP10.04□□□□□ -0.8
CHD2-226ENST00000636881 PREX1Q8TCU6 1659 aa10.04□□□□□ -0.8
CHD2-226ENST00000636881 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.04□□□□□ -0.8
CHD2-226ENST00000636881 CCDC69A6NI79 296 aa10.04□□□□□ -0.8
CHD2-226ENST00000636881 NR1I2O75469 434 aa10.04□□□□□ -0.8
CHD2-226ENST00000636881 CAVIN2O95810 425 aa10.04□□□□□ -0.8
CHD2-226ENST00000636881 ARID5BQ14865 1188 aa10.04□□□□□ -0.8
CHD2-226ENST00000636881 HSP90AB2PQ58FF8 381 aa10.04□□□□□ -0.8
CHD2-226ENST00000636881 NOL10Q9BSC4 688 aaKnown RBP10.04□□□□□ -0.8
CHD2-226ENST00000636881 TPCN1Q9ULQ1 816 aa10.04□□□□□ -0.8
CHD2-226ENST00000636881 CCDC61Q9Y6R9 512 aa10.04□□□□□ -0.8
CHD2-226ENST00000636881 DLC1Q96QB1 1528 aa10.04□□□□□ -0.8
CHD2-226ENST00000636881 TMEM131LA2VDJ0 1609 aa10.04□□□□□ -0.8
CHD2-226ENST00000636881 PSMA5P28066 241 aa10.04□□□□□ -0.8
CHD2-226ENST00000636881 BMS1Q14692 1282 aaKnown RBP10.04□□□□□ -0.8
CHD2-226ENST00000636881 MTHFSDQ2M296 383 aaKnown RBP10.04□□□□□ -0.8
CHD2-226ENST00000636881 NPM1P06748 294 aaKnown RBP eCLIP10.03□□□□□ -0.8
CHD2-226ENST00000636881 KIF2AO00139 706 aaPredicted RBP10.03□□□□□ -0.8
CHD2-226ENST00000636881 HSP90AB4PQ58FF6 505 aa10.03□□□□□ -0.8
CHD2-226ENST00000636881 LARP1Q6PKG0 1096 aaKnown RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms