RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 MRPL50Q8N5N7 158 aaKnown RBP20.49■□□□□ 0.87
CLN6-216ENST00000636876 MAP3K15Q6ZN16 1313 aa20.49■□□□□ 0.87
CLN6-216ENST00000636876 GYS1P13807 737 aa20.48■□□□□ 0.87
CLN6-216ENST00000636876 G2E3Q7L622 706 aa20.48■□□□□ 0.87
CLN6-216ENST00000636876 BCL2L13Q9BXK5 485 aa20.48■□□□□ 0.87
CLN6-216ENST00000636876 SMC4Q9NTJ3 1288 aa20.48■□□□□ 0.87
CLN6-216ENST00000636876 BCORQ6W2J9 1755 aa20.48■□□□□ 0.87
CLN6-216ENST00000636876 ERVV-1B6SEH8 477 aa20.47■□□□□ 0.87
CLN6-216ENST00000636876 FLIIQ13045 1269 aa20.47■□□□□ 0.87
CLN6-216ENST00000636876 BCL2L12Q9HB09 334 aa20.47■□□□□ 0.87
CLN6-216ENST00000636876 RGL2O15211 777 aa20.46■□□□□ 0.87
CLN6-216ENST00000636876 ZBTB3Q9H5J0 574 aa20.46■□□□□ 0.87
CLN6-216ENST00000636876 ZBTB7AO95365 584 aa20.45■□□□□ 0.86
CLN6-216ENST00000636876 ANKRD13DQ6ZTN6 518 aa20.45■□□□□ 0.86
CLN6-216ENST00000636876 PLBD2Q8NHP8 589 aa20.45■□□□□ 0.86
CLN6-216ENST00000636876 DDX58O95786 925 aaKnown RBP20.44■□□□□ 0.86
CLN6-216ENST00000636876 BRPF1P55201 1214 aaPredicted RBP20.44■□□□□ 0.86
CLN6-216ENST00000636876 FKBP8Q14318 412 aa20.44■□□□□ 0.86
CLN6-216ENST00000636876 HLFQ16534 295 aa20.44■□□□□ 0.86
CLN6-216ENST00000636876 MSL1Q68DK7 614 aa20.44■□□□□ 0.86
CLN6-216ENST00000636876 CLEC4GQ6UXB4 293 aa20.44■□□□□ 0.86
CLN6-216ENST00000636876 NLGN1Q8N2Q7 840 aa20.44■□□□□ 0.86
CLN6-216ENST00000636876 MTFR1LQ9H019 292 aa20.44■□□□□ 0.86
CLN6-216ENST00000636876 SPON1Q9HCB6 807 aa20.44■□□□□ 0.86
CLN6-216ENST00000636876 ZNF652Q9Y2D9 606 aa20.44■□□□□ 0.86
CLN6-216ENST00000636876 FKBP5Q13451 457 aaPredicted RBP20.43■□□□□ 0.86
CLN6-216ENST00000636876 GIGYF2Q6Y7W6 1299 aaKnown RBP20.43■□□□□ 0.86
CLN6-216ENST00000636876 NUP98P52948 1817 aa20.42■□□□□ 0.86
CLN6-216ENST00000636876 BCAR3O75815 825 aa20.42■□□□□ 0.86
CLN6-216ENST00000636876 RIC3Q7Z5B4 369 aa20.42■□□□□ 0.86
CLN6-216ENST00000636876 ADCY9O60503 1353 aa20.42■□□□□ 0.86
CLN6-216ENST00000636876 PI4KAP2A4QPH2 592 aa20.41■□□□□ 0.86
CLN6-216ENST00000636876 KSR2Q6VAB6 950 aa20.41■□□□□ 0.86
CLN6-216ENST00000636876 PI4KAP1Q8N8J0 262 aa20.41■□□□□ 0.86
CLN6-216ENST00000636876 RCAN3Q9UKA8 241 aa20.41■□□□□ 0.86
CLN6-216ENST00000636876 ATF5Q9Y2D1 282 aaPredicted RBP20.41■□□□□ 0.86
CLN6-216ENST00000636876 COL24A1Q17RW2 1714 aa20.41■□□□□ 0.86
CLN6-216ENST00000636876 ARFGEF2Q9Y6D5 1785 aa20.41■□□□□ 0.86
CLN6-216ENST00000636876 PTPRCP08575 1304 aa20.4■□□□□ 0.86
CLN6-216ENST00000636876 TBC1D9BQ66K14 1250 aa20.4■□□□□ 0.86
CLN6-216ENST00000636876 KIF16BQ96L93 1317 aa20.4■□□□□ 0.86
CLN6-216ENST00000636876 ATP10DQ9P241 1426 aa20.4■□□□□ 0.86
CLN6-216ENST00000636876 PPP1R1BQ9UD71 204 aaPredicted RBP20.4■□□□□ 0.86
CLN6-216ENST00000636876 TM4SF1P30408 202 aa20.39■□□□□ 0.85
CLN6-216ENST00000636876 NFIXQ14938 502 aa20.39■□□□□ 0.85
CLN6-216ENST00000636876 HSP90AB3PQ58FF7 597 aa20.39■□□□□ 0.85
CLN6-216ENST00000636876 NOB1Q9ULX3 412 aaKnown RBP20.39■□□□□ 0.85
CLN6-216ENST00000636876 MAP3K2Q9Y2U5 619 aa20.39■□□□□ 0.85
CLN6-216ENST00000636876 MMP10P09238 476 aa20.38■□□□□ 0.85
CLN6-216ENST00000636876 TCIRG1Q13488 830 aa20.38■□□□□ 0.85
CLN6-216ENST00000636876 BICDL1Q6ZP65 573 aa20.37■□□□□ 0.85
CLN6-216ENST00000636876 ZNF34Q8IZ26 560 aa20.37■□□□□ 0.85
CLN6-216ENST00000636876 DNAAF4Q8WXU2 420 aa20.37■□□□□ 0.85
CLN6-216ENST00000636876 METTL22Q9BUU2 404 aaPredicted RBP20.37■□□□□ 0.85
CLN6-216ENST00000636876 NIP7Q9Y221 180 aaKnown RBP eCLIP20.37■□□□□ 0.85
CLN6-216ENST00000636876 ANKRD36CQ5JPF3 1778 aa20.36■□□□□ 0.85
CLN6-216ENST00000636876 F6X3S4 739 aa20.36■□□□□ 0.85
CLN6-216ENST00000636876 GPTP24298 496 aa20.36■□□□□ 0.85
CLN6-216ENST00000636876 DDR1Q08345 913 aa20.36■□□□□ 0.85
CLN6-216ENST00000636876 SETDB2Q96T68 719 aa20.36■□□□□ 0.85
CLN6-216ENST00000636876 SGIP1Q9BQI5 828 aa20.36■□□□□ 0.85
CLN6-216ENST00000636876 CARMIL3Q8ND23 1372 aa20.35■□□□□ 0.85
CLN6-216ENST00000636876 POLRMTO00411 1230 aaKnown RBP20.35■□□□□ 0.85
CLN6-216ENST00000636876 IPO8O15397 1037 aaKnown RBP20.35■□□□□ 0.85
CLN6-216ENST00000636876 POLD1P28340 1107 aa20.35■□□□□ 0.85
CLN6-216ENST00000636876 PTGER2P43116 358 aa20.35■□□□□ 0.85
CLN6-216ENST00000636876 ARHGAP45Q92619 1136 aa20.35■□□□□ 0.85
CLN6-216ENST00000636876 MYD88Q99836 296 aa20.35■□□□□ 0.85
CLN6-216ENST00000636876 ISCA1Q9BUE6 129 aa20.35■□□□□ 0.85
CLN6-216ENST00000636876 API5Q9BZZ5 524 aaKnown RBP20.35■□□□□ 0.85
CLN6-216ENST00000636876 UBN2Q6ZU65 1347 aa20.34■□□□□ 0.85
CLN6-216ENST00000636876 CHD4Q14839 1912 aa20.34■□□□□ 0.85
CLN6-216ENST00000636876 PARP10Q53GL7 1025 aa20.34■□□□□ 0.85
CLN6-216ENST00000636876 FRAT1Q92837 279 aaPredicted RBP20.34■□□□□ 0.85
CLN6-216ENST00000636876 PARP3Q9Y6F1 533 aa20.34■□□□□ 0.85
CLN6-216ENST00000636876 ATP5J2-PTCD1G3V325 749 aa20.33■□□□□ 0.85
CLN6-216ENST00000636876 NEXNQ0ZGT2 675 aa20.33■□□□□ 0.85
CLN6-216ENST00000636876 TRIM28Q13263 835 aaKnown RBP20.33■□□□□ 0.85
CLN6-216ENST00000636876 SERPINB2P05120 415 aa20.32■□□□□ 0.84
CLN6-216ENST00000636876 IGKV5-2P06315 115 aa20.32■□□□□ 0.84
CLN6-216ENST00000636876 YY1P25490 414 aa20.32■□□□□ 0.84
CLN6-216ENST00000636876 ZKSCAN2Q63HK3 967 aa20.32■□□□□ 0.84
CLN6-216ENST00000636876 NLRP10Q86W26 655 aa20.32■□□□□ 0.84
CLN6-216ENST00000636876 SLC4A10Q6U841 1118 aa20.31■□□□□ 0.84
CLN6-216ENST00000636876 ATF7IPQ6VMQ6 1270 aa20.31■□□□□ 0.84
CLN6-216ENST00000636876 LINS1Q8NG48 757 aa20.31■□□□□ 0.84
CLN6-216ENST00000636876 PXDNLA1KZ92 1463 aa20.3■□□□□ 0.84
CLN6-216ENST00000636876 AFDNP55196 1824 aaKnown RBP20.3■□□□□ 0.84
CLN6-216ENST00000636876 TRIM27P14373 513 aa20.3■□□□□ 0.84
CLN6-216ENST00000636876 BEND3Q5T5X7 828 aa20.3■□□□□ 0.84
CLN6-216ENST00000636876 SUSD4Q5VX71 490 aa20.3■□□□□ 0.84
CLN6-216ENST00000636876 NBPF5PQ86XG9 351 aaPredicted RBP20.3■□□□□ 0.84
CLN6-216ENST00000636876 CCDC191Q8NCU4 936 aa20.3■□□□□ 0.84
CLN6-216ENST00000636876 IBTKQ9P2D0 1353 aaPredicted RBP20.3■□□□□ 0.84
CLN6-216ENST00000636876 NRXN2Q9P2S2 1712 aa20.3■□□□□ 0.84
CLN6-216ENST00000636876 FAM177BA6PVY3 158 aa20.29■□□□□ 0.84
CLN6-216ENST00000636876 NEURL1BA8MQ27 555 aa20.29■□□□□ 0.84
CLN6-216ENST00000636876 NTSR2O95665 410 aa20.29■□□□□ 0.84
CLN6-216ENST00000636876 CWF19L2Q2TBE0 894 aaKnown RBP20.29■□□□□ 0.84
CLN6-216ENST00000636876 PPP1R42Q7Z4L9 355 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms