RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 PNMA8AQ86V59 439 aaPredicted RBP24.87■■□□□ 1.57
CLN6-212ENST00000636020 IL13P35225 146 aa24.86■■□□□ 1.57
CLN6-212ENST00000636020 CNBD1Q8NA66 436 aa24.86■■□□□ 1.57
CLN6-212ENST00000636020 ABT1Q9ULW3 272 aaKnown RBP24.86■■□□□ 1.57
CLN6-212ENST00000636020 TBC1D2BQ9UPU7 963 aa24.86■■□□□ 1.57
CLN6-212ENST00000636020 CACNA1SQ13698 1873 aa24.84■■□□□ 1.57
CLN6-212ENST00000636020 CCDC93Q567U6 631 aa24.84■■□□□ 1.57
CLN6-212ENST00000636020 SETDB2Q96T68 719 aa24.84■■□□□ 1.57
CLN6-212ENST00000636020 ARFGEF2Q9Y6D5 1785 aa24.84■■□□□ 1.57
CLN6-212ENST00000636020 SCN7AQ01118 1682 aa24.83■■□□□ 1.57
CLN6-212ENST00000636020 ST5P78524 1137 aa24.83■■□□□ 1.57
CLN6-212ENST00000636020 FKBP4Q02790 459 aaKnown RBP eCLIP24.83■■□□□ 1.57
CLN6-212ENST00000636020 ZNF277Q9NRM2 450 aaPredicted RBP24.83■■□□□ 1.57
CLN6-212ENST00000636020 TNRC18O15417 2968 aaPredicted RBP24.82■■□□□ 1.56
CLN6-212ENST00000636020 CAPNS2Q96L46 248 aa24.82■■□□□ 1.56
CLN6-212ENST00000636020 BEGAINQ9BUH8 593 aa24.82■■□□□ 1.56
CLN6-212ENST00000636020 DDX21Q9NR30 783 aaKnown RBP eCLIP24.82■■□□□ 1.56
CLN6-212ENST00000636020 UBR2Q8IWV8 1755 aa24.82■■□□□ 1.56
CLN6-212ENST00000636020 RNF123Q5XPI4 1314 aa24.82■■□□□ 1.56
CLN6-212ENST00000636020 NPHP1O15259 732 aa24.81■■□□□ 1.56
CLN6-212ENST00000636020 POLR3GLQ9BT43 218 aa24.81■■□□□ 1.56
CLN6-212ENST00000636020 THSD7BQ9C0I4 1608 aa24.8■■□□□ 1.56
CLN6-212ENST00000636020 CAMTA2O94983 1202 aa24.8■■□□□ 1.56
CLN6-212ENST00000636020 IL6STP40189 918 aaPredicted RBP24.8■■□□□ 1.56
CLN6-212ENST00000636020 GPR101Q96P66 508 aaPredicted RBP24.8■■□□□ 1.56
CLN6-212ENST00000636020 ZNF330Q9Y3S2 320 aaPredicted RBP24.8■■□□□ 1.56
CLN6-212ENST00000636020 FZD9O00144 591 aa24.79■■□□□ 1.56
CLN6-212ENST00000636020 ECE1P42892 770 aa24.79■■□□□ 1.56
CLN6-212ENST00000636020 MORC1Q86VD1 984 aa24.79■■□□□ 1.56
CLN6-212ENST00000636020 TTC5Q8N0Z6 440 aa24.78■■□□□ 1.56
CLN6-212ENST00000636020 MTHFSDQ2M296 383 aaKnown RBP24.77■■□□□ 1.56
CLN6-212ENST00000636020 GPC2Q8N158 579 aa24.77■■□□□ 1.56
CLN6-212ENST00000636020 ZNF496Q96IT1 587 aaPredicted RBP24.77■■□□□ 1.56
CLN6-212ENST00000636020 TEX13AQ9BXU3 409 aaPredicted RBP24.77■■□□□ 1.56
CLN6-212ENST00000636020 PANK3Q9H999 370 aa24.77■■□□□ 1.56
CLN6-212ENST00000636020 NPR1P16066 1061 aa24.76■■□□□ 1.55
CLN6-212ENST00000636020 FMR1Q06787 632 aaKnown RBP eCLIP24.76■■□□□ 1.55
CLN6-212ENST00000636020 CYP4F22Q6NT55 531 aa24.76■■□□□ 1.55
CLN6-212ENST00000636020 OLFM4Q6UX06 510 aa24.76■■□□□ 1.55
CLN6-212ENST00000636020 RTKN2Q8IZC4 609 aa24.76■■□□□ 1.55
CLN6-212ENST00000636020 HEG1Q9ULI3 1381 aa24.76■■□□□ 1.55
CLN6-212ENST00000636020 KLRG2A4D1S0 409 aaPredicted RBP24.75■■□□□ 1.55
CLN6-212ENST00000636020 PAXIP1Q6ZW49 1069 aaPredicted RBP24.75■■□□□ 1.55
CLN6-212ENST00000636020 TSKSQ9UJT2 592 aa24.75■■□□□ 1.55
CLN6-212ENST00000636020 A1BGP04217 495 aa24.74■■□□□ 1.55
CLN6-212ENST00000636020 IARSP41252 1262 aaKnown RBP24.74■■□□□ 1.55
CLN6-212ENST00000636020 MCOLN1Q9GZU1 580 aa24.74■■□□□ 1.55
CLN6-212ENST00000636020 HMOX1P09601 288 aa24.73■■□□□ 1.55
CLN6-212ENST00000636020 GRM1Q13255 1194 aa24.73■■□□□ 1.55
CLN6-212ENST00000636020 SYNE4Q8N205 404 aa24.73■■□□□ 1.55
CLN6-212ENST00000636020 CFAP44Q96MT7 982 aa24.73■■□□□ 1.55
CLN6-212ENST00000636020 PDE4DIPQ5VU43 2346 aa24.73■■□□□ 1.55
CLN6-212ENST00000636020 MAP2K2P36507 400 aa24.72■■□□□ 1.55
CLN6-212ENST00000636020 CST9Q5W186 159 aa24.72■■□□□ 1.55
CLN6-212ENST00000636020 ZNF790Q6PG37 636 aa24.72■■□□□ 1.55
CLN6-212ENST00000636020 NPM2Q86SE8 214 aaKnown RBP24.71■■□□□ 1.55
CLN6-212ENST00000636020 NBPF5PQ86XG9 351 aaPredicted RBP24.71■■□□□ 1.55
CLN6-212ENST00000636020 DZIP3Q86Y13 1208 aaKnown RBP24.7■■□□□ 1.54
CLN6-212ENST00000636020 TLL2Q9Y6L7 1015 aa24.7■■□□□ 1.54
CLN6-212ENST00000636020 AOC2O75106 756 aa24.69■■□□□ 1.54
CLN6-212ENST00000636020 CA12O43570 354 aa24.68■■□□□ 1.54
CLN6-212ENST00000636020 CLEC4GQ6UXB4 293 aa24.68■■□□□ 1.54
CLN6-212ENST00000636020 JDP2Q8WYK2 163 aa24.68■■□□□ 1.54
CLN6-212ENST00000636020 LTBP1Q14766 1721 aa24.68■■□□□ 1.54
CLN6-212ENST00000636020 CASP8AP2Q9UKL3 1982 aa24.67■■□□□ 1.54
CLN6-212ENST00000636020 TRAF5O00463 557 aa24.67■■□□□ 1.54
CLN6-212ENST00000636020 GJA3Q9Y6H8 435 aa24.67■■□□□ 1.54
CLN6-212ENST00000636020 BCORQ6W2J9 1755 aa24.67■■□□□ 1.54
CLN6-212ENST00000636020 TRPM7Q96QT4 1865 aa24.66■■□□□ 1.54
CLN6-212ENST00000636020 LMOD1P29536 600 aaPredicted RBP24.66■■□□□ 1.54
CLN6-212ENST00000636020 EPS15P42566 896 aa24.66■■□□□ 1.54
CLN6-212ENST00000636020 SCNN1DP51172 638 aa24.66■■□□□ 1.54
CLN6-212ENST00000636020 IL17REQ8NFR9 667 aa24.66■■□□□ 1.54
CLN6-212ENST00000636020 PSMD1Q99460 953 aa24.66■■□□□ 1.54
CLN6-212ENST00000636020 ALDH1B1P30837 517 aa24.65■■□□□ 1.54
CLN6-212ENST00000636020 EIF6P56537 245 aaKnown RBP24.65■■□□□ 1.54
CLN6-212ENST00000636020 TEFQ10587 303 aa24.65■■□□□ 1.54
CLN6-212ENST00000636020 TPTE2Q6XPS3 522 aa24.65■■□□□ 1.54
CLN6-212ENST00000636020 SNED1Q8TER0 1413 aa24.65■■□□□ 1.54
CLN6-212ENST00000636020 FMNL2Q96PY5 1086 aa24.65■■□□□ 1.54
CLN6-212ENST00000636020 DGKZQ13574 1117 aa24.64■■□□□ 1.54
CLN6-212ENST00000636020 USP50Q70EL3 339 aaPredicted RBP24.64■■□□□ 1.54
CLN6-212ENST00000636020 COL4A5P29400 1685 aa24.62■■□□□ 1.53
CLN6-212ENST00000636020 SAPCD2Q86UD0 394 aa24.62■■□□□ 1.53
CLN6-212ENST00000636020 BRPF1P55201 1214 aaPredicted RBP24.61■■□□□ 1.53
CLN6-212ENST00000636020 ZNF652Q9Y2D9 606 aa24.61■■□□□ 1.53
CLN6-212ENST00000636020 PIP4K2AP48426 406 aaPredicted RBP24.6■■□□□ 1.53
CLN6-212ENST00000636020 USP16Q9Y5T5 823 aa24.6■■□□□ 1.53
CLN6-212ENST00000636020 GNAT3A8MTJ3 354 aa24.59■■□□□ 1.53
CLN6-212ENST00000636020 KCNQ3O43525 872 aa24.59■■□□□ 1.53
CLN6-212ENST00000636020 HHIPL1Q96JK4 782 aa24.59■■□□□ 1.53
CLN6-212ENST00000636020 NIP7Q9Y221 180 aaKnown RBP eCLIP24.59■■□□□ 1.53
CLN6-212ENST00000636020 SIPA1L3O60292 1781 aaPredicted RBP24.59■■□□□ 1.53
CLN6-212ENST00000636020 CC2D2BQ6DHV5 1058 aa24.58■■□□□ 1.53
CLN6-212ENST00000636020 KNSTRNQ9Y448 316 aa24.58■■□□□ 1.53
CLN6-212ENST00000636020 RGL2O15211 777 aa24.57■■□□□ 1.52
CLN6-212ENST00000636020 FAM177BA6PVY3 158 aa24.56■■□□□ 1.52
CLN6-212ENST00000636020 DIAPH1O60610 1272 aaKnown RBP24.56■■□□□ 1.52
CLN6-212ENST00000636020 CELF2O95319 508 aaKnown RBP24.56■■□□□ 1.52
CLN6-212ENST00000636020 CRY2Q49AN0 593 aa24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms