RNA–Protein interactions for RNA: ENST00000636012.1

CACNA1A-221, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-221ENST00000636012 ANKRD30BQ9BXX2 1392 aa18.43■□□□□ 0.54
CACNA1A-221ENST00000636012 TTC36A6NLP5 189 aa18.43■□□□□ 0.54
CACNA1A-221ENST00000636012 TERF1P54274 439 aa18.43■□□□□ 0.54
CACNA1A-221ENST00000636012 RGS22Q8NE09 1264 aa18.43■□□□□ 0.54
CACNA1A-221ENST00000636012 FOXO3O43524 673 aa18.43■□□□□ 0.54
CACNA1A-221ENST00000636012 TOP1P11387 765 aaKnown RBP18.43■□□□□ 0.54
CACNA1A-221ENST00000636012 NOP2P46087 812 aaKnown RBP18.43■□□□□ 0.54
CACNA1A-221ENST00000636012 CETN1Q12798 172 aa18.43■□□□□ 0.54
CACNA1A-221ENST00000636012 UBXN4Q92575 508 aa18.42■□□□□ 0.54
CACNA1A-221ENST00000636012 MTIF2P46199 727 aaKnown RBP18.42■□□□□ 0.54
CACNA1A-221ENST00000636012 ST5P78524 1137 aa18.42■□□□□ 0.54
CACNA1A-221ENST00000636012 TSPY2A6NKD2 308 aa18.42■□□□□ 0.54
CACNA1A-221ENST00000636012 RNF187Q5TA31 235 aaPredicted RBP18.42■□□□□ 0.54
CACNA1A-221ENST00000636012 C16orf71Q8IYS4 520 aaPredicted RBP18.42■□□□□ 0.54
CACNA1A-221ENST00000636012 GCOM1H8Y6P7 765 aaPredicted RBP18.42■□□□□ 0.54
CACNA1A-221ENST00000636012 MYZAPP0CAP1 466 aa18.42■□□□□ 0.54
CACNA1A-221ENST00000636012 KIF4BQ2VIQ3 1234 aa18.42■□□□□ 0.54
CACNA1A-221ENST00000636012 PHAXQ9H814 394 aaKnown RBP18.42■□□□□ 0.54
CACNA1A-221ENST00000636012 WWC3Q9ULE0 1092 aa18.42■□□□□ 0.54
CACNA1A-221ENST00000636012 CCDC61Q9Y6R9 512 aa18.42■□□□□ 0.54
CACNA1A-221ENST00000636012 GRIN2BQ13224 1484 aa18.42■□□□□ 0.54
CACNA1A-221ENST00000636012 F6X3S4 739 aa18.42■□□□□ 0.54
CACNA1A-221ENST00000636012 MX1P20591 662 aa18.42■□□□□ 0.54
CACNA1A-221ENST00000636012 CABP5Q9NP86 173 aa18.41■□□□□ 0.54
CACNA1A-221ENST00000636012 IGF1RP08069 1367 aa18.41■□□□□ 0.54
CACNA1A-221ENST00000636012 GOLGA8AA7E2F4 631 aa18.41■□□□□ 0.54
CACNA1A-221ENST00000636012 MPHOSPH6Q99547 160 aaKnown RBP18.41■□□□□ 0.54
CACNA1A-221ENST00000636012 ZBTB3Q9H5J0 574 aa18.41■□□□□ 0.54
CACNA1A-221ENST00000636012 SSX2IPQ9Y2D8 614 aa18.41■□□□□ 0.54
CACNA1A-221ENST00000636012 PLS1Q14651 629 aa18.41■□□□□ 0.54
CACNA1A-221ENST00000636012 KAT14Q9H8E8 782 aa18.41■□□□□ 0.54
CACNA1A-221ENST00000636012 MAP9Q49MG5 647 aa18.4■□□□□ 0.54
CACNA1A-221ENST00000636012 RNF41Q9H4P4 317 aaPredicted RBP18.4■□□□□ 0.54
CACNA1A-221ENST00000636012 ATAD2Q6PL18 1390 aa18.4■□□□□ 0.54
CACNA1A-221ENST00000636012 HLA-DOAP06340 250 aa18.4■□□□□ 0.54
CACNA1A-221ENST00000636012 TMEM67Q5HYA8 995 aa18.4■□□□□ 0.54
CACNA1A-221ENST00000636012 SYNCQ9H7C4 482 aa18.4■□□□□ 0.54
CACNA1A-221ENST00000636012 SH3BP5O60239 455 aa18.4■□□□□ 0.54
CACNA1A-221ENST00000636012 BAG3O95817 575 aa18.4■□□□□ 0.54
CACNA1A-221ENST00000636012 ANO10Q9NW15 660 aa18.4■□□□□ 0.54
CACNA1A-221ENST00000636012 SFPQP23246 707 aaKnown RBP eCLIP18.4■□□□□ 0.54
CACNA1A-221ENST00000636012 ZBTB9Q96C00 473 aa18.4■□□□□ 0.54
CACNA1A-221ENST00000636012 F8W031 263 aaPredicted RBP18.4■□□□□ 0.54
CACNA1A-221ENST00000636012 USO1O60763 962 aaKnown RBP18.4■□□□□ 0.54
CACNA1A-221ENST00000636012 PTPN14Q15678 1187 aa18.4■□□□□ 0.54
CACNA1A-221ENST00000636012 AMOTQ4VCS5 1084 aa18.4■□□□□ 0.54
CACNA1A-221ENST00000636012 HLTFQ14527 1009 aaKnown RBP eCLIP18.39■□□□□ 0.54
CACNA1A-221ENST00000636012 SPECC1Q5M775 1068 aa18.39■□□□□ 0.54
CACNA1A-221ENST00000636012 TCP11L1Q9NUJ3 509 aa18.39■□□□□ 0.54
CACNA1A-221ENST00000636012 GIGYF2Q6Y7W6 1299 aaKnown RBP18.39■□□□□ 0.53
CACNA1A-221ENST00000636012 MAP3K2Q9Y2U5 619 aa18.39■□□□□ 0.53
CACNA1A-221ENST00000636012 CASKIN1Q8WXD9 1431 aa18.39■□□□□ 0.53
CACNA1A-221ENST00000636012 GOLIM4O00461 696 aa18.39■□□□□ 0.53
CACNA1A-221ENST00000636012 HYPKQ9NX55 129 aa18.39■□□□□ 0.53
CACNA1A-221ENST00000636012 URI1O94763 535 aaPredicted RBP18.39■□□□□ 0.53
CACNA1A-221ENST00000636012 CFAP58Q5T655 872 aa18.39■□□□□ 0.53
CACNA1A-221ENST00000636012 PLEKHH2Q8IVE3 1493 aa18.38■□□□□ 0.53
CACNA1A-221ENST00000636012 CCDC40Q4G0X9 1142 aa18.38■□□□□ 0.53
CACNA1A-221ENST00000636012 CDC5LQ99459 802 aaKnown RBP18.38■□□□□ 0.53
CACNA1A-221ENST00000636012 PRDM10Q9NQV6 1147 aa18.38■□□□□ 0.53
CACNA1A-221ENST00000636012 HMGB1P09429 215 aaKnown RBP18.38■□□□□ 0.53
CACNA1A-221ENST00000636012 ATXN8OSP0DMR3 200 aa18.38■□□□□ 0.53
CACNA1A-221ENST00000636012 PDE4BQ07343 736 aa18.38■□□□□ 0.53
CACNA1A-221ENST00000636012 TAOK3Q9H2K8 898 aa18.38■□□□□ 0.53
CACNA1A-221ENST00000636012 SETD1BQ9UPS6 1966 aaKnown RBP18.38■□□□□ 0.53
CACNA1A-221ENST00000636012 KIAA1107Q9UPP5 1409 aa18.38■□□□□ 0.53
CACNA1A-221ENST00000636012 ATP5J2-PTCD1G3V325 749 aa18.38■□□□□ 0.53
CACNA1A-221ENST00000636012 PSMC4P43686 418 aa18.38■□□□□ 0.53
CACNA1A-221ENST00000636012 HAND2P61296 217 aa18.38■□□□□ 0.53
CACNA1A-221ENST00000636012 EHBP1L1Q8N3D4 1523 aa18.38■□□□□ 0.53
CACNA1A-221ENST00000636012 HFM1A2PYH4 1435 aa18.38■□□□□ 0.53
CACNA1A-221ENST00000636012 IDEP14735 1019 aa18.38■□□□□ 0.53
CACNA1A-221ENST00000636012 PAFAH1B1P43034 410 aa18.38■□□□□ 0.53
CACNA1A-221ENST00000636012 RAB11FIP4Q86YS3 637 aa18.38■□□□□ 0.53
CACNA1A-221ENST00000636012 JARID2Q92833 1246 aaPredicted RBP18.38■□□□□ 0.53
CACNA1A-221ENST00000636012 PANK2Q9BZ23 570 aa18.38■□□□□ 0.53
CACNA1A-221ENST00000636012 RPAP2Q8IXW5 612 aaPredicted RBP18.37■□□□□ 0.53
CACNA1A-221ENST00000636012 ZSCAN12O43309 604 aa18.37■□□□□ 0.53
CACNA1A-221ENST00000636012 KIF5BP33176 963 aa18.37■□□□□ 0.53
CACNA1A-221ENST00000636012 AMPD3Q01432 767 aa18.37■□□□□ 0.53
CACNA1A-221ENST00000636012 FERMT1Q9BQL6 677 aa18.37■□□□□ 0.53
CACNA1A-221ENST00000636012 TRMT1Q9NXH9 659 aaKnown RBP18.37■□□□□ 0.53
CACNA1A-221ENST00000636012 SHTN1A0MZ66 631 aa18.37■□□□□ 0.53
CACNA1A-221ENST00000636012 PPFIA3O75145 1194 aa18.37■□□□□ 0.53
CACNA1A-221ENST00000636012 BIN1O00499 593 aa18.37■□□□□ 0.53
CACNA1A-221ENST00000636012 PKNOX2Q96KN3 472 aa18.37■□□□□ 0.53
CACNA1A-221ENST00000636012 LDHAL6AQ6ZMR3 332 aa18.36■□□□□ 0.53
CACNA1A-221ENST00000636012 TTC21AQ8NDW8 1320 aa18.36■□□□□ 0.53
CACNA1A-221ENST00000636012 TSNARE1Q96NA8 513 aa18.36■□□□□ 0.53
CACNA1A-221ENST00000636012 NAIPQ13075 1403 aa18.36■□□□□ 0.53
CACNA1A-221ENST00000636012 CCDC12Q8WUD4 166 aaPredicted RBP18.36■□□□□ 0.53
CACNA1A-221ENST00000636012 UTP14AQ9BVJ6 771 aaKnown RBP18.36■□□□□ 0.53
CACNA1A-221ENST00000636012 CCDC174Q6PII3 467 aa18.35■□□□□ 0.53
CACNA1A-221ENST00000636012 MFSD6Q6ZSS7 791 aa18.35■□□□□ 0.53
CACNA1A-221ENST00000636012 ACSBG1Q96GR2 724 aa18.35■□□□□ 0.53
CACNA1A-221ENST00000636012 STXBP4Q6ZWJ1 553 aa18.35■□□□□ 0.53
CACNA1A-221ENST00000636012 DPH6Q7L8W6 267 aa18.35■□□□□ 0.53
CACNA1A-221ENST00000636012 MRVI1Q9Y6F6 885 aa18.35■□□□□ 0.53
CACNA1A-221ENST00000636012 FERP16591 822 aa18.35■□□□□ 0.53
CACNA1A-221ENST00000636012 SNRKQ9NRH2 765 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms