RNA–Protein interactions for RNA: ENST00000635997.1

NEDD4L-238, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene NEDD4L, Length 4,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-238ENST00000635997 CAVIN4Q5BKX8 364 aa17.02■□□□□ 0.32
NEDD4L-238ENST00000635997 PCDHB15Q9Y5E8 787 aa17.02■□□□□ 0.32
NEDD4L-238ENST00000635997 ADGRL3Q9HAR2 1447 aa17.02■□□□□ 0.31
NEDD4L-238ENST00000635997 IFIT1P09914 478 aaKnown RBP17.02■□□□□ 0.31
NEDD4L-238ENST00000635997 CARD10Q9BWT7 1032 aa17.02■□□□□ 0.31
NEDD4L-238ENST00000635997 CAVIN1Q6NZI2 390 aaKnown RBP17.01■□□□□ 0.31
NEDD4L-238ENST00000635997 FAM13BQ9NYF5 915 aa17.01■□□□□ 0.31
NEDD4L-238ENST00000635997 NSFL1CQ9UNZ2 370 aaKnown RBP17.01■□□□□ 0.31
NEDD4L-238ENST00000635997 MYO1BO43795 1136 aa17.01■□□□□ 0.31
NEDD4L-238ENST00000635997 DDX11Q96FC9 970 aa17.01■□□□□ 0.31
NEDD4L-238ENST00000635997 MINDY4BA8MYZ0 360 aa17.01■□□□□ 0.31
NEDD4L-238ENST00000635997 GLRX3O76003 335 aaKnown RBP17.01■□□□□ 0.31
NEDD4L-238ENST00000635997 WDR78Q5VTH9 848 aa17.01■□□□□ 0.31
NEDD4L-238ENST00000635997 NLGN1Q8N2Q7 840 aa17.01■□□□□ 0.31
NEDD4L-238ENST00000635997 CCDC82Q8N4S0 544 aa17.01■□□□□ 0.31
NEDD4L-238ENST00000635997 PPFIA3O75145 1194 aa17■□□□□ 0.31
NEDD4L-238ENST00000635997 EAPPQ56P03 285 aaPredicted RBP17■□□□□ 0.31
NEDD4L-238ENST00000635997 IQSEC3Q9UPP2 1182 aaPredicted RBP17■□□□□ 0.31
NEDD4L-238ENST00000635997 EIF6P56537 245 aaKnown RBP17■□□□□ 0.31
NEDD4L-238ENST00000635997 FERMT3Q86UX7 667 aa17■□□□□ 0.31
NEDD4L-238ENST00000635997 AIDAQ96BJ3 306 aa17■□□□□ 0.31
NEDD4L-238ENST00000635997 PCMTD1Q96MG8 357 aaPredicted RBP17■□□□□ 0.31
NEDD4L-238ENST00000635997 PRPF40BQ6NWY9 871 aaKnown RBP16.99■□□□□ 0.31
NEDD4L-238ENST00000635997 PIK3C2GO75747 1445 aa16.99■□□□□ 0.31
NEDD4L-238ENST00000635997 DEFB132Q7Z7B7 95 aa16.98■□□□□ 0.31
NEDD4L-238ENST00000635997 SPATA31E1Q6ZUB1 1445 aa16.98■□□□□ 0.31
NEDD4L-238ENST00000635997 RLBP1P12271 317 aa16.98■□□□□ 0.31
NEDD4L-238ENST00000635997 KCNQ4P56696 695 aa16.98■□□□□ 0.31
NEDD4L-238ENST00000635997 SASS6Q6UVJ0 657 aa16.98■□□□□ 0.31
NEDD4L-238ENST00000635997 MPNDQ8N594 471 aa16.98■□□□□ 0.31
NEDD4L-238ENST00000635997 CCDC43Q96MW1 224 aaKnown RBP16.98■□□□□ 0.31
NEDD4L-238ENST00000635997 HDAC9Q9UKV0 1011 aa16.98■□□□□ 0.31
NEDD4L-238ENST00000635997 TRAK2O60296 914 aa16.97■□□□□ 0.31
NEDD4L-238ENST00000635997 CASTP20810 708 aaKnown RBP16.97■□□□□ 0.31
NEDD4L-238ENST00000635997 LARP1BQ659C4 914 aaKnown RBP16.97■□□□□ 0.31
NEDD4L-238ENST00000635997 MAST1Q9Y2H9 1570 aa16.97■□□□□ 0.31
NEDD4L-238ENST00000635997 SLC3A2P08195 630 aaKnown RBP16.97■□□□□ 0.31
NEDD4L-238ENST00000635997 LARGE2Q8N3Y3 721 aa16.97■□□□□ 0.31
NEDD4L-238ENST00000635997 PUS7Q96PZ0 661 aaKnown RBP16.97■□□□□ 0.31
NEDD4L-238ENST00000635997 ADGRL2O95490 1459 aa16.97■□□□□ 0.31
NEDD4L-238ENST00000635997 XBP1P17861 261 aa16.97■□□□□ 0.31
NEDD4L-238ENST00000635997 ANKRD18BA2A2Z9 1011 aa16.97■□□□□ 0.31
NEDD4L-238ENST00000635997 MYCNP04198 464 aaPredicted RBP16.97■□□□□ 0.31
NEDD4L-238ENST00000635997 CWF19L2Q2TBE0 894 aaKnown RBP16.97■□□□□ 0.31
NEDD4L-238ENST00000635997 PARD3Q8TEW0 1356 aa16.96■□□□□ 0.31
NEDD4L-238ENST00000635997 SLC4A8Q2Y0W8 1093 aa16.96■□□□□ 0.31
NEDD4L-238ENST00000635997 CCDC24Q8N4L8 307 aa16.96■□□□□ 0.31
NEDD4L-238ENST00000635997 CAMSAP1Q5T5Y3 1602 aa16.96■□□□□ 0.31
NEDD4L-238ENST00000635997 K7ELQ4 463 aaPredicted RBP16.96■□□□□ 0.31
NEDD4L-238ENST00000635997 CCAR2Q8N163 923 aaKnown RBP16.96■□□□□ 0.31
NEDD4L-238ENST00000635997 PDRG1Q9NUG6 133 aa16.96■□□□□ 0.31
NEDD4L-238ENST00000635997 CWC25Q9NXE8 425 aaPredicted RBP16.96■□□□□ 0.31
NEDD4L-238ENST00000635997 GOLIM4O00461 696 aa16.96■□□□□ 0.31
NEDD4L-238ENST00000635997 THRAP3Q9Y2W1 955 aaKnown RBP16.96■□□□□ 0.31
NEDD4L-238ENST00000635997 PDCP20941 246 aa16.95■□□□□ 0.3
NEDD4L-238ENST00000635997 DNAJC10Q8IXB1 793 aa16.95■□□□□ 0.3
NEDD4L-238ENST00000635997 WDR17Q8IZU2 1322 aa16.95■□□□□ 0.3
NEDD4L-238ENST00000635997 UTP14AQ9BVJ6 771 aaKnown RBP16.95■□□□□ 0.3
NEDD4L-238ENST00000635997 PA2G4Q9UQ80 394 aaKnown RBP16.95■□□□□ 0.3
NEDD4L-238ENST00000635997 ZNF592Q92610 1267 aa16.95■□□□□ 0.3
NEDD4L-238ENST00000635997 ASXL1Q8IXJ9 1541 aa16.95■□□□□ 0.3
NEDD4L-238ENST00000635997 MCM2P49736 904 aa16.95■□□□□ 0.3
NEDD4L-238ENST00000635997 STK38Q15208 465 aa16.95■□□□□ 0.3
NEDD4L-238ENST00000635997 LMBR1LQ6UX01 489 aa16.95■□□□□ 0.3
NEDD4L-238ENST00000635997 UBAC1Q9BSL1 405 aa16.95■□□□□ 0.3
NEDD4L-238ENST00000635997 PHAXQ9H814 394 aaKnown RBP16.95■□□□□ 0.3
NEDD4L-238ENST00000635997 BRMS1Q9HCU9 246 aa16.95■□□□□ 0.3
NEDD4L-238ENST00000635997 PTPRCP08575 1304 aa16.94■□□□□ 0.3
NEDD4L-238ENST00000635997 VAMP4O75379 141 aa16.94■□□□□ 0.3
NEDD4L-238ENST00000635997 TPM3P06753 285 aa16.94■□□□□ 0.3
NEDD4L-238ENST00000635997 TSR1Q2NL82 804 aaKnown RBP16.94■□□□□ 0.3
NEDD4L-238ENST00000635997 CCDC152Q4G0S7 254 aa16.94■□□□□ 0.3
NEDD4L-238ENST00000635997 SETD1BQ9UPS6 1966 aaKnown RBP16.94■□□□□ 0.3
NEDD4L-238ENST00000635997 ANKRD18AQ8IVF6 992 aa16.94■□□□□ 0.3
NEDD4L-238ENST00000635997 ZSCAN25Q6NSZ9 544 aa16.94■□□□□ 0.3
NEDD4L-238ENST00000635997 CRACR2BQ8N4Y2 399 aaPredicted RBP16.94■□□□□ 0.3
NEDD4L-238ENST00000635997 CCDC69A6NI79 296 aa16.93■□□□□ 0.3
NEDD4L-238ENST00000635997 NOC3LQ8WTT2 800 aaKnown RBP16.93■□□□□ 0.3
NEDD4L-238ENST00000635997 EYA3Q99504 573 aa16.93■□□□□ 0.3
NEDD4L-238ENST00000635997 AKAP2Q9Y2D5 859 aa16.93■□□□□ 0.3
NEDD4L-238ENST00000635997 RRP9O43818 475 aaKnown RBP16.93■□□□□ 0.3
NEDD4L-238ENST00000635997 LOC102724428A0A0B4J2F2 783 aa16.93■□□□□ 0.3
NEDD4L-238ENST00000635997 RAB11FIP3O75154 756 aa16.93■□□□□ 0.3
NEDD4L-238ENST00000635997 SIK1P57059 783 aa16.93■□□□□ 0.3
NEDD4L-238ENST00000635997 LGR6Q9HBX8 967 aa16.93■□□□□ 0.3
NEDD4L-238ENST00000635997 ABCC3O15438 1527 aa16.93■□□□□ 0.3
NEDD4L-238ENST00000635997 RIMBP2O15034 1052 aa16.93■□□□□ 0.3
NEDD4L-238ENST00000635997 ARHGEF25Q86VW2 580 aa16.93■□□□□ 0.3
NEDD4L-238ENST00000635997 ABCA9Q8IUA7 1624 aa16.92■□□□□ 0.3
NEDD4L-238ENST00000635997 HAND2P61296 217 aa16.92■□□□□ 0.3
NEDD4L-238ENST00000635997 RBM10P98175 930 aaKnown RBP16.92■□□□□ 0.3
NEDD4L-238ENST00000635997 ECHDC1Q9NTX5 307 aa16.92■□□□□ 0.3
NEDD4L-238ENST00000635997 GLI2P10070 1586 aa16.92■□□□□ 0.3
NEDD4L-238ENST00000635997 RIMS1Q86UR5 1692 aaKnown RBP16.92■□□□□ 0.3
NEDD4L-238ENST00000635997 DZIP1Q86YF9 867 aaKnown RBP16.92■□□□□ 0.3
NEDD4L-238ENST00000635997 CCDC83Q8IWF9 413 aa16.92■□□□□ 0.3
NEDD4L-238ENST00000635997 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.91■□□□□ 0.3
NEDD4L-238ENST00000635997 G2E3Q7L622 706 aa16.91■□□□□ 0.3
NEDD4L-238ENST00000635997 TRIM22Q8IYM9 498 aa16.91■□□□□ 0.3
NEDD4L-238ENST00000635997 HELBQ8NG08 1087 aaPredicted RBP16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms