RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 ZNF295-AS1Q8N0V1 137 aa5□□□□□ -1.61
PSPC1-208ENST00000635562 Q8N3U1 123 aa5□□□□□ -1.61
PSPC1-208ENST00000635562 ELOA3Q8NG57 546 aa5□□□□□ -1.61
PSPC1-208ENST00000635562 ZIC5Q96T25 663 aa5□□□□□ -1.61
PSPC1-208ENST00000635562 PPP1R12CQ9BZL4 782 aa5□□□□□ -1.61
PSPC1-208ENST00000635562 STAU1O95793 577 aaKnown RBP4.99□□□□□ -1.61
PSPC1-208ENST00000635562 CHRNA4P43681 627 aa4.99□□□□□ -1.61
PSPC1-208ENST00000635562 NACC1Q96RE7 527 aa4.99□□□□□ -1.61
PSPC1-208ENST00000635562 SCHIP1Q9P0W5 487 aaPredicted RBP4.99□□□□□ -1.61
PSPC1-208ENST00000635562 SERTAD1Q9UHV2 236 aa4.99□□□□□ -1.61
PSPC1-208ENST00000635562 PALM3A6NDB9 673 aaPredicted RBP4.98□□□□□ -1.61
PSPC1-208ENST00000635562 SIN3BO75182 1162 aa4.98□□□□□ -1.61
PSPC1-208ENST00000635562 PPP1R15AO75807 674 aaPredicted RBP4.98□□□□□ -1.61
PSPC1-208ENST00000635562 GATA4P43694 442 aa4.98□□□□□ -1.61
PSPC1-208ENST00000635562 TEAD4Q15561 434 aa4.98□□□□□ -1.61
PSPC1-208ENST00000635562 NEUROD4Q9HD90 331 aa4.98□□□□□ -1.61
PSPC1-208ENST00000635562 PRDM6Q9NQX0 595 aa4.98□□□□□ -1.61
PSPC1-208ENST00000635562 PODXL2Q9NZ53 605 aa4.98□□□□□ -1.61
PSPC1-208ENST00000635562 CHMP3Q9Y3E7 222 aa4.98□□□□□ -1.61
PSPC1-208ENST00000635562 PCDHGA11Q9Y5H2 935 aa4.98□□□□□ -1.61
PSPC1-208ENST00000635562 ADARB2-AS1A8MUL3 147 aa4.97□□□□□ -1.61
PSPC1-208ENST00000635562 APBA3O96018 575 aa4.97□□□□□ -1.61
PSPC1-208ENST00000635562 PCBP4P57723 403 aaKnown RBP4.97□□□□□ -1.61
PSPC1-208ENST00000635562 TRIM50Q86XT4 487 aa4.97□□□□□ -1.61
PSPC1-208ENST00000635562 TNFRSF25Q93038 417 aa4.97□□□□□ -1.61
PSPC1-208ENST00000635562 TRIM11Q96F44 468 aa4.97□□□□□ -1.61
PSPC1-208ENST00000635562 PLVAPQ9BX97 442 aa4.97□□□□□ -1.61
PSPC1-208ENST00000635562 KLF15Q9UIH9 416 aa4.97□□□□□ -1.61
PSPC1-208ENST00000635562 MAFBQ9Y5Q3 323 aaPredicted RBP4.97□□□□□ -1.61
PSPC1-208ENST00000635562 PIK3CDO00329 1044 aa4.96□□□□□ -1.62
PSPC1-208ENST00000635562 ATP9BO43861 1147 aa4.96□□□□□ -1.62
PSPC1-208ENST00000635562 GTF2IP78347 998 aa4.96□□□□□ -1.62
PSPC1-208ENST00000635562 PSME1Q06323 249 aa4.96□□□□□ -1.62
PSPC1-208ENST00000635562 SYT9Q86SS6 491 aa4.96□□□□□ -1.62
PSPC1-208ENST00000635562 L3MBTL2Q969R5 705 aa4.96□□□□□ -1.62
PSPC1-208ENST00000635562 PBXIP1Q96AQ6 731 aa4.96□□□□□ -1.62
PSPC1-208ENST00000635562 EFCC1Q9HA90 598 aa4.96□□□□□ -1.62
PSPC1-208ENST00000635562 ANKIB1Q9P2G1 1089 aa4.96□□□□□ -1.62
PSPC1-208ENST00000635562 TFIP11Q9UBB9 837 aaKnown RBP4.96□□□□□ -1.62
PSPC1-208ENST00000635562 EML1O00423 815 aa4.95□□□□□ -1.62
PSPC1-208ENST00000635562 SKIP12755 728 aa4.95□□□□□ -1.62
PSPC1-208ENST00000635562 NOS2P35228 1153 aa4.95□□□□□ -1.62
PSPC1-208ENST00000635562 ATP1A2P50993 1020 aa4.95□□□□□ -1.62
PSPC1-208ENST00000635562 HIRAP54198 1017 aaPredicted RBP4.95□□□□□ -1.62
PSPC1-208ENST00000635562 HIF1AQ16665 826 aa4.95□□□□□ -1.62
PSPC1-208ENST00000635562 C1orf53Q5VUE5 145 aa4.95□□□□□ -1.62
PSPC1-208ENST00000635562 PLEKHM2Q8IWE5 1019 aa4.95□□□□□ -1.62
PSPC1-208ENST00000635562 MDFIQ99750 246 aa4.95□□□□□ -1.62
PSPC1-208ENST00000635562 SEMA6BQ9H3T3 888 aa4.95□□□□□ -1.62
PSPC1-208ENST00000635562 ZNF358Q9NW07 568 aa4.95□□□□□ -1.62
PSPC1-208ENST00000635562 ZNF232Q9UNY5 417 aa4.95□□□□□ -1.62
PSPC1-208ENST00000635562 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP4.94□□□□□ -1.62
PSPC1-208ENST00000635562 SERTM1A2A2V5 107 aa4.94□□□□□ -1.62
PSPC1-208ENST00000635562 EPHA4P54764 986 aa4.94□□□□□ -1.62
PSPC1-208ENST00000635562 DOC2BQ14184 412 aa4.94□□□□□ -1.62
PSPC1-208ENST00000635562 KANK4Q5T7N3 995 aaPredicted RBP4.94□□□□□ -1.62
PSPC1-208ENST00000635562 SLC9A9Q8IVB4 645 aa4.94□□□□□ -1.62
PSPC1-208ENST00000635562 RHPN1Q8TCX5 695 aa4.94□□□□□ -1.62
PSPC1-208ENST00000635562 USP3Q9Y6I4 520 aa4.94□□□□□ -1.62
PSPC1-208ENST00000635562 M0R2N6 131 aa4.93□□□□□ -1.62
PSPC1-208ENST00000635562 RFX1P22670 979 aa4.93□□□□□ -1.62
PSPC1-208ENST00000635562 LMOD1P29536 600 aaPredicted RBP4.93□□□□□ -1.62
PSPC1-208ENST00000635562 TXLNAP40222 546 aa4.93□□□□□ -1.62
PSPC1-208ENST00000635562 KCNQ4P56696 695 aa4.93□□□□□ -1.62
PSPC1-208ENST00000635562 PSMA6P60900 246 aaKnown RBP4.93□□□□□ -1.62
PSPC1-208ENST00000635562 TRIM28Q13263 835 aaKnown RBP4.93□□□□□ -1.62
PSPC1-208ENST00000635562 NCOA4Q13772 614 aa4.93□□□□□ -1.62
PSPC1-208ENST00000635562 ZMYM1Q5SVZ6 1142 aa4.93□□□□□ -1.62
PSPC1-208ENST00000635562 LRRC69Q6ZNQ3 347 aa4.93□□□□□ -1.62
PSPC1-208ENST00000635562 TRAIPQ9BWF2 469 aa4.93□□□□□ -1.62
PSPC1-208ENST00000635562 STRN4Q9NRL3 753 aa4.93□□□□□ -1.62
PSPC1-208ENST00000635562 HCN2Q9UL51 889 aa4.93□□□□□ -1.62
PSPC1-208ENST00000635562 PARP3Q9Y6F1 533 aa4.93□□□□□ -1.62
PSPC1-208ENST00000635562 USP17L3A6NCW0 530 aa4.92□□□□□ -1.62
PSPC1-208ENST00000635562 USP17L4A6NCW7 530 aa4.92□□□□□ -1.62
PSPC1-208ENST00000635562 USP17L5A8MUK1 530 aa4.92□□□□□ -1.62
PSPC1-208ENST00000635562 M0R082 166 aa4.92□□□□□ -1.62
PSPC1-208ENST00000635562 ATG7O95352 703 aa4.92□□□□□ -1.62
PSPC1-208ENST00000635562 SPEM2Q0P670 501 aa4.92□□□□□ -1.62
PSPC1-208ENST00000635562 USP17L2Q6R6M4 530 aa4.92□□□□□ -1.62
PSPC1-208ENST00000635562 USP17L1Q7RTZ2 530 aa4.92□□□□□ -1.62
PSPC1-208ENST00000635562 RETREG2Q8NC44 543 aa4.92□□□□□ -1.62
PSPC1-208ENST00000635562 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.92□□□□□ -1.62
PSPC1-208ENST00000635562 ZNF417Q8TAU3 575 aa4.92□□□□□ -1.62
PSPC1-208ENST00000635562 ZDHHC1Q8WTX9 485 aa4.92□□□□□ -1.62
PSPC1-208ENST00000635562 ZNF587Q96SQ5 575 aaPredicted RBP4.92□□□□□ -1.62
PSPC1-208ENST00000635562 RBM19Q9Y4C8 960 aaKnown RBP4.92□□□□□ -1.62
PSPC1-208ENST00000635562 C9orf172C9J069 976 aa4.91□□□□□ -1.62
PSPC1-208ENST00000635562 ADH7P40394 386 aa4.91□□□□□ -1.62
PSPC1-208ENST00000635562 NRG1Q02297 640 aaPredicted RBP4.91□□□□□ -1.62
PSPC1-208ENST00000635562 POTEAQ6S8J7 498 aa4.91□□□□□ -1.62
PSPC1-208ENST00000635562 MICALL1Q8N3F8 863 aa4.91□□□□□ -1.62
PSPC1-208ENST00000635562 BRD7Q9NPI1 651 aa4.91□□□□□ -1.62
PSPC1-208ENST00000635562 LILRB5O75023 590 aa4.9□□□□□ -1.63
PSPC1-208ENST00000635562 ELOAQ14241 798 aaKnown RBP4.9□□□□□ -1.63
PSPC1-208ENST00000635562 RSPO4Q2I0M5 234 aaPredicted RBP4.9□□□□□ -1.63
PSPC1-208ENST00000635562 NKAPLQ5M9Q1 402 aa4.9□□□□□ -1.63
PSPC1-208ENST00000635562 STAG2Q8N3U4 1231 aa4.9□□□□□ -1.63
PSPC1-208ENST00000635562 LARGE2Q8N3Y3 721 aa4.9□□□□□ -1.63
PSPC1-208ENST00000635562 TPCN2Q8NHX9 752 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms