RNA–Protein interactions for RNA: ENST00000634433.1

BRCA1-230, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-230ENST00000634433 HEG1Q9ULI3 1381 aa8.84□□□□□ -0.99
BRCA1-230ENST00000634433 PRDM11Q9NQV5 511 aa8.84□□□□□ -0.99
BRCA1-230ENST00000634433 RGPD5Q99666 1765 aa8.83□□□□□ -1
BRCA1-230ENST00000634433 KCNQ3O43525 872 aa8.83□□□□□ -1
BRCA1-230ENST00000634433 UBTFL1P0CB47 393 aaPredicted RBP8.83□□□□□ -1
BRCA1-230ENST00000634433 DNAAF4Q8WXU2 420 aa8.83□□□□□ -1
BRCA1-230ENST00000634433 CHPF2Q9P2E5 772 aa8.83□□□□□ -1
BRCA1-230ENST00000634433 DDX58O95786 925 aaKnown RBP8.83□□□□□ -1
BRCA1-230ENST00000634433 NCLP19338 710 aaKnown RBP8.83□□□□□ -1
BRCA1-230ENST00000634433 SPOCK2Q92563 424 aa8.83□□□□□ -1
BRCA1-230ENST00000634433 RNF25Q96BH1 459 aaPredicted RBP8.83□□□□□ -1
BRCA1-230ENST00000634433 C22orf23Q9BZE7 217 aa8.83□□□□□ -1
BRCA1-230ENST00000634433 PHAXQ9H814 394 aaKnown RBP8.83□□□□□ -1
BRCA1-230ENST00000634433 WDR17Q8IZU2 1322 aa8.82□□□□□ -1
BRCA1-230ENST00000634433 NWD2Q9ULI1 1742 aa8.82□□□□□ -1
BRCA1-230ENST00000634433 TRAK2O60296 914 aa8.82□□□□□ -1
BRCA1-230ENST00000634433 ZNF790Q6PG37 636 aa8.82□□□□□ -1
BRCA1-230ENST00000634433 FAM43BQ6ZT52 329 aaPredicted RBP8.82□□□□□ -1
BRCA1-230ENST00000634433 PLEKHM2Q8IWE5 1019 aa8.82□□□□□ -1
BRCA1-230ENST00000634433 KDM4CQ9H3R0 1056 aa8.82□□□□□ -1
BRCA1-230ENST00000634433 ADAMTS7Q9UKP4 1686 aa8.82□□□□□ -1
BRCA1-230ENST00000634433 ALDH1L1O75891 902 aa8.82□□□□□ -1
BRCA1-230ENST00000634433 TTC5Q8N0Z6 440 aa8.82□□□□□ -1
BRCA1-230ENST00000634433 C8orf37Q96NL8 207 aa8.82□□□□□ -1
BRCA1-230ENST00000634433 USP44Q9H0E7 712 aa8.82□□□□□ -1
BRCA1-230ENST00000634433 DDX21Q9NR30 783 aaKnown RBP eCLIP8.82□□□□□ -1
BRCA1-230ENST00000634433 USP21Q9UK80 565 aa8.82□□□□□ -1
BRCA1-230ENST00000634433 PI4KAP2A4QPH2 592 aa8.81□□□□□ -1
BRCA1-230ENST00000634433 CDC45O75419 566 aa8.81□□□□□ -1
BRCA1-230ENST00000634433 CASC1Q6TDU7 716 aa8.81□□□□□ -1
BRCA1-230ENST00000634433 KSR2Q6VAB6 950 aa8.81□□□□□ -1
BRCA1-230ENST00000634433 TOM1L2Q6ZVM7 507 aa8.81□□□□□ -1
BRCA1-230ENST00000634433 PI4KAP1Q8N8J0 262 aa8.81□□□□□ -1
BRCA1-230ENST00000634433 CRYBG1Q9Y4K1 1723 aa8.81□□□□□ -1
BRCA1-230ENST00000634433 SEMA3EO15041 775 aa8.81□□□□□ -1
BRCA1-230ENST00000634433 RAB11FIP3O75154 756 aa8.81□□□□□ -1
BRCA1-230ENST00000634433 BEND3Q5T5X7 828 aa8.81□□□□□ -1
BRCA1-230ENST00000634433 TTC22Q5TAA0 569 aa8.81□□□□□ -1
BRCA1-230ENST00000634433 ZCRB1Q8TBF4 217 aaKnown RBP8.81□□□□□ -1
BRCA1-230ENST00000634433 CARD10Q9BWT7 1032 aa8.81□□□□□ -1
BRCA1-230ENST00000634433 MEGF6O75095 1541 aa8.8□□□□□ -1
BRCA1-230ENST00000634433 BRWD3Q6RI45 1802 aa8.8□□□□□ -1
BRCA1-230ENST00000634433 CABP4P57796 275 aa8.8□□□□□ -1
BRCA1-230ENST00000634433 EVA1CP58658 441 aa8.8□□□□□ -1
BRCA1-230ENST00000634433 HSP90AB4PQ58FF6 505 aa8.8□□□□□ -1
BRCA1-230ENST00000634433 NFATC2IPQ8NCF5 419 aa8.8□□□□□ -1
BRCA1-230ENST00000634433 FMNL2Q96PY5 1086 aa8.8□□□□□ -1
BRCA1-230ENST00000634433 LRRCC1Q9C099 1032 aa8.8□□□□□ -1
BRCA1-230ENST00000634433 LRRFIP2Q9Y608 721 aaKnown RBP8.8□□□□□ -1
BRCA1-230ENST00000634433 PCDH11XQ9BZA7 1347 aa8.8□□□□□ -1
BRCA1-230ENST00000634433 PCDH11YQ9BZA8 1340 aa8.8□□□□□ -1
BRCA1-230ENST00000634433 N4BP2Q86UW6 1770 aaPredicted RBP8.8□□□□□ -1
BRCA1-230ENST00000634433 SNRPA1P09661 255 aaKnown RBP8.8□□□□□ -1
BRCA1-230ENST00000634433 RBM10P98175 930 aaKnown RBP8.8□□□□□ -1
BRCA1-230ENST00000634433 RTL5Q5HYW3 569 aaPredicted RBP8.8□□□□□ -1
BRCA1-230ENST00000634433 OSBPL3Q9H4L5 887 aa8.8□□□□□ -1
BRCA1-230ENST00000634433 SIPA1L3O60292 1781 aaPredicted RBP8.8□□□□□ -1
BRCA1-230ENST00000634433 KDM6AO15550 1401 aaPredicted RBP8.79□□□□□ -1
BRCA1-230ENST00000634433 ERVV-2B6SEH9 535 aa8.79□□□□□ -1
BRCA1-230ENST00000634433 CYP27B1O15528 508 aa8.79□□□□□ -1
BRCA1-230ENST00000634433 SSH3Q8TE77 659 aa8.79□□□□□ -1
BRCA1-230ENST00000634433 IBTKQ9P2D0 1353 aaPredicted RBP8.79□□□□□ -1
BRCA1-230ENST00000634433 SCN11AQ9UI33 1791 aa8.79□□□□□ -1
BRCA1-230ENST00000634433 IL2RBP14784 551 aa8.79□□□□□ -1
BRCA1-230ENST00000634433 TBC1D9Q6ZT07 1266 aa8.79□□□□□ -1
BRCA1-230ENST00000634433 MAP3K2Q9Y2U5 619 aa8.79□□□□□ -1
BRCA1-230ENST00000634433 MRC1P22897 1456 aa8.78□□□□□ -1
BRCA1-230ENST00000634433 LOC102724159A0A0B4J2E5 919 aa8.78□□□□□ -1
BRCA1-230ENST00000634433 PWP2Q15269 919 aaKnown RBP8.78□□□□□ -1
BRCA1-230ENST00000634433 LARP1Q6PKG0 1096 aaKnown RBP8.78□□□□□ -1
BRCA1-230ENST00000634433 LINS1Q8NG48 757 aa8.78□□□□□ -1
BRCA1-230ENST00000634433 C9orf78Q9NZ63 289 aaPredicted RBP8.78□□□□□ -1
BRCA1-230ENST00000634433 ADCY9O60503 1353 aa8.78□□□□□ -1
BRCA1-230ENST00000634433 PKD1L3Q7Z443 1732 aa8.78□□□□□ -1
BRCA1-230ENST00000634433 ZMYND10O75800 440 aa8.78□□□□□ -1
BRCA1-230ENST00000634433 SLC4A3P48751 1232 aa8.78□□□□□ -1
BRCA1-230ENST00000634433 NEXNQ0ZGT2 675 aa8.78□□□□□ -1
BRCA1-230ENST00000634433 SLC39A6Q13433 755 aa8.78□□□□□ -1
BRCA1-230ENST00000634433 POLA2Q14181 598 aa8.78□□□□□ -1
BRCA1-230ENST00000634433 C16orf71Q8IYS4 520 aaPredicted RBP8.78□□□□□ -1
BRCA1-230ENST00000634433 COL5A2P05997 1499 aaPredicted RBP8.77□□□□□ -1
BRCA1-230ENST00000634433 PNMA6EA0A0J9YXQ4 647 aa8.77□□□□□ -1.01
BRCA1-230ENST00000634433 ONECUT3O60422 494 aaPredicted RBP8.77□□□□□ -1.01
BRCA1-230ENST00000634433 GSPT1P15170 499 aaKnown RBP8.77□□□□□ -1.01
BRCA1-230ENST00000634433 SF3B2Q13435 895 aaKnown RBP8.77□□□□□ -1.01
BRCA1-230ENST00000634433 PPP1R42Q7Z4L9 355 aa8.77□□□□□ -1.01
BRCA1-230ENST00000634433 EXOC6BQ9Y2D4 811 aa8.77□□□□□ -1.01
BRCA1-230ENST00000634433 ANXA1P04083 346 aa8.77□□□□□ -1.01
BRCA1-230ENST00000634433 PDE1AP54750 535 aa8.77□□□□□ -1.01
BRCA1-230ENST00000634433 BARGINQ6ZT62 677 aa8.77□□□□□ -1.01
BRCA1-230ENST00000634433 RIC3Q7Z5B4 369 aa8.77□□□□□ -1.01
BRCA1-230ENST00000634433 ZNF496Q96IT1 587 aaPredicted RBP8.77□□□□□ -1.01
BRCA1-230ENST00000634433 AOX1Q06278 1338 aa8.77□□□□□ -1.01
BRCA1-230ENST00000634433 ERBB4Q15303 1308 aa8.77□□□□□ -1.01
BRCA1-230ENST00000634433 BCL9LQ86UU0 1499 aa8.76□□□□□ -1.01
BRCA1-230ENST00000634433 GLI3P10071 1580 aa8.76□□□□□ -1.01
BRCA1-230ENST00000634433 PARP4Q9UKK3 1724 aaKnown RBP8.76□□□□□ -1.01
BRCA1-230ENST00000634433 MTX1Q13505 466 aa8.76□□□□□ -1.01
BRCA1-230ENST00000634433 PDIA6Q15084 440 aa8.76□□□□□ -1.01
BRCA1-230ENST00000634433 KIF1BPQ96EK5 621 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms