RNA–Protein interactions for RNA: ENST00000630424.2

UBE3A-220, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 5 BASIC

Gene UBE3A, Length 5,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-220ENST00000630424 HMGXB3Q12766 1538 aa16.43■□□□□ 0.22
UBE3A-220ENST00000630424 KIF5BP33176 963 aa16.43■□□□□ 0.22
UBE3A-220ENST00000630424 ARHGAP29Q52LW3 1261 aa16.43■□□□□ 0.22
UBE3A-220ENST00000630424 TSG101Q99816 390 aa16.43■□□□□ 0.22
UBE3A-220ENST00000630424 PHAXQ9H814 394 aaKnown RBP16.43■□□□□ 0.22
UBE3A-220ENST00000630424 CAMSAP2Q08AD1 1489 aa16.43■□□□□ 0.22
UBE3A-220ENST00000630424 CCDC144CPQ8IYA2 1237 aa16.43■□□□□ 0.22
UBE3A-220ENST00000630424 SUPT6HQ7KZ85 1726 aaKnown RBP16.43■□□□□ 0.22
UBE3A-220ENST00000630424 BAG4O95429 457 aaKnown RBP16.43■□□□□ 0.22
UBE3A-220ENST00000630424 MAP3K11Q16584 847 aa16.43■□□□□ 0.22
UBE3A-220ENST00000630424 TMEM67Q5HYA8 995 aa16.43■□□□□ 0.22
UBE3A-220ENST00000630424 ZNF397Q8NF99 534 aaPredicted RBP16.43■□□□□ 0.22
UBE3A-220ENST00000630424 MICU3Q86XE3 530 aa16.43■□□□□ 0.22
UBE3A-220ENST00000630424 CACNA2D4Q7Z3S7 1137 aa16.42■□□□□ 0.22
UBE3A-220ENST00000630424 MAP7D2Q96T17 732 aa16.42■□□□□ 0.22
UBE3A-220ENST00000630424 HDAC9Q9UKV0 1011 aa16.42■□□□□ 0.22
UBE3A-220ENST00000630424 NIP7Q9Y221 180 aaKnown RBP eCLIP16.42■□□□□ 0.22
UBE3A-220ENST00000630424 PTPRCP08575 1304 aa16.42■□□□□ 0.22
UBE3A-220ENST00000630424 POLD1P28340 1107 aa16.42■□□□□ 0.22
UBE3A-220ENST00000630424 HMGN5P82970 282 aaKnown RBP16.42■□□□□ 0.22
UBE3A-220ENST00000630424 XAGE3Q8WTP9 111 aa16.42■□□□□ 0.22
UBE3A-220ENST00000630424 CCDC12Q8WUD4 166 aaPredicted RBP16.42■□□□□ 0.22
UBE3A-220ENST00000630424 FKBP15Q5T1M5 1219 aa16.42■□□□□ 0.22
UBE3A-220ENST00000630424 NBPF14Q5TI25 921 aa16.42■□□□□ 0.22
UBE3A-220ENST00000630424 MFSD6Q6ZSS7 791 aa16.42■□□□□ 0.22
UBE3A-220ENST00000630424 COPS6Q7L5N1 327 aa16.42■□□□□ 0.22
UBE3A-220ENST00000630424 CRNKL1Q9BZJ0 848 aaKnown RBP16.42■□□□□ 0.22
UBE3A-220ENST00000630424 EVI5LQ96CN4 794 aa16.41■□□□□ 0.22
UBE3A-220ENST00000630424 SH2B1Q9NRF2 756 aaPredicted RBP16.41■□□□□ 0.22
UBE3A-220ENST00000630424 TOP2BQ02880 1626 aa16.41■□□□□ 0.22
UBE3A-220ENST00000630424 IARSP41252 1262 aaKnown RBP16.41■□□□□ 0.22
UBE3A-220ENST00000630424 LARP6Q9BRS8 491 aaKnown RBP16.41■□□□□ 0.22
UBE3A-220ENST00000630424 USP16Q9Y5T5 823 aa16.41■□□□□ 0.22
UBE3A-220ENST00000630424 SCAND2PQ9GZW5 306 aaPredicted RBP16.41■□□□□ 0.22
UBE3A-220ENST00000630424 CIZ1Q9ULV3 898 aaPredicted RBP16.41■□□□□ 0.22
UBE3A-220ENST00000630424 GRIN2AQ12879 1464 aa16.4■□□□□ 0.22
UBE3A-220ENST00000630424 KIF20AO95235 890 aa16.4■□□□□ 0.22
UBE3A-220ENST00000630424 UQCRFS1P1P0C7P4 283 aa16.4■□□□□ 0.22
UBE3A-220ENST00000630424 TRIM27P14373 513 aa16.4■□□□□ 0.22
UBE3A-220ENST00000630424 ABCC5O15440 1437 aa16.4■□□□□ 0.22
UBE3A-220ENST00000630424 JAKMIP3Q5VZ66 844 aa16.4■□□□□ 0.22
UBE3A-220ENST00000630424 DHX29Q7Z478 1369 aaKnown RBP16.4■□□□□ 0.22
UBE3A-220ENST00000630424 RAB11FIP4Q86YS3 637 aa16.4■□□□□ 0.22
UBE3A-220ENST00000630424 MBIPQ9NS73 344 aa16.4■□□□□ 0.22
UBE3A-220ENST00000630424 TCP11L1Q9NUJ3 509 aa16.4■□□□□ 0.22
UBE3A-220ENST00000630424 PIK3R4Q99570 1358 aa16.4■□□□□ 0.22
UBE3A-220ENST00000630424 PPFIA3O75145 1194 aa16.4■□□□□ 0.22
UBE3A-220ENST00000630424 CCDC112Q8NEF3 446 aa16.4■□□□□ 0.22
UBE3A-220ENST00000630424 MACROD2A1Z1Q3 448 aa16.4■□□□□ 0.22
UBE3A-220ENST00000630424 RBM26Q5T8P6 1007 aaKnown RBP16.4■□□□□ 0.22
UBE3A-220ENST00000630424 CCDC150Q8NCX0 1101 aa16.4■□□□□ 0.22
UBE3A-220ENST00000630424 VTI1AQ96AJ9 217 aa16.4■□□□□ 0.22
UBE3A-220ENST00000630424 ZC3H12CQ9C0D7 883 aaKnown RBP16.4■□□□□ 0.22
UBE3A-220ENST00000630424 TCERG1LQ5VWI1 586 aa16.39■□□□□ 0.21
UBE3A-220ENST00000630424 VPS36Q86VN1 386 aa16.39■□□□□ 0.21
UBE3A-220ENST00000630424 GSTO1P78417 241 aa16.39■□□□□ 0.21
UBE3A-220ENST00000630424 EZRP15311 586 aaKnown RBP16.39■□□□□ 0.21
UBE3A-220ENST00000630424 ANAPC15P60006 121 aa16.39■□□□□ 0.21
UBE3A-220ENST00000630424 JDP2Q8WYK2 163 aa16.39■□□□□ 0.21
UBE3A-220ENST00000630424 NSFL1CQ9UNZ2 370 aaKnown RBP16.39■□□□□ 0.21
UBE3A-220ENST00000630424 SPA17Q15506 151 aa16.38■□□□□ 0.21
UBE3A-220ENST00000630424 ATP2B3Q16720 1220 aa16.38■□□□□ 0.21
UBE3A-220ENST00000630424 ABCA10Q8WWZ4 1543 aa16.38■□□□□ 0.21
UBE3A-220ENST00000630424 CYP7A1P22680 504 aa16.38■□□□□ 0.21
UBE3A-220ENST00000630424 C20orf194Q5TEA3 1177 aa16.38■□□□□ 0.21
UBE3A-220ENST00000630424 DRC1Q96MC2 740 aa16.38■□□□□ 0.21
UBE3A-220ENST00000630424 CHPF2Q9P2E5 772 aa16.38■□□□□ 0.21
UBE3A-220ENST00000630424 LIMCH1Q9UPQ0 1083 aa16.38■□□□□ 0.21
UBE3A-220ENST00000630424 UBA7P41226 1012 aa16.38■□□□□ 0.21
UBE3A-220ENST00000630424 PANK2Q9BZ23 570 aa16.38■□□□□ 0.21
UBE3A-220ENST00000630424 C19orf44Q9H6X5 657 aa16.38■□□□□ 0.21
UBE3A-220ENST00000630424 VEZTQ9HBM0 779 aa16.38■□□□□ 0.21
UBE3A-220ENST00000630424 ECM2O94769 699 aaPredicted RBP16.38■□□□□ 0.21
UBE3A-220ENST00000630424 TPTE2Q6XPS3 522 aa16.38■□□□□ 0.21
UBE3A-220ENST00000630424 MPHOSPH6Q99547 160 aaKnown RBP16.38■□□□□ 0.21
UBE3A-220ENST00000630424 RTCBQ9Y3I0 505 aaKnown RBP16.38■□□□□ 0.21
UBE3A-220ENST00000630424 FAM135AQ9P2D6 1515 aa16.37■□□□□ 0.21
UBE3A-220ENST00000630424 IL2RBP14784 551 aa16.37■□□□□ 0.21
UBE3A-220ENST00000630424 PICALMQ13492 652 aa16.37■□□□□ 0.21
UBE3A-220ENST00000630424 USP8P40818 1118 aa16.37■□□□□ 0.21
UBE3A-220ENST00000630424 CETN1Q12798 172 aa16.37■□□□□ 0.21
UBE3A-220ENST00000630424 TAF3Q5VWG9 929 aa16.37■□□□□ 0.21
UBE3A-220ENST00000630424 TSHZ3Q63HK5 1081 aa16.37■□□□□ 0.21
UBE3A-220ENST00000630424 LMBR1LQ6UX01 489 aa16.37■□□□□ 0.21
UBE3A-220ENST00000630424 CALML4Q96GE6 196 aa16.37■□□□□ 0.21
UBE3A-220ENST00000630424 C11orf95C9JLR9 678 aaPredicted RBP16.37■□□□□ 0.21
UBE3A-220ENST00000630424 NF2P35240 595 aa16.37■□□□□ 0.21
UBE3A-220ENST00000630424 ERLIN1O75477 346 aa16.37■□□□□ 0.21
UBE3A-220ENST00000630424 CKAP2LQ8IYA6 745 aa16.37■□□□□ 0.21
UBE3A-220ENST00000630424 CNNM3Q8NE01 707 aa16.37■□□□□ 0.21
UBE3A-220ENST00000630424 SIRT1Q96EB6 747 aa16.37■□□□□ 0.21
UBE3A-220ENST00000630424 ORC3Q9UBD5 711 aaPredicted RBP16.37■□□□□ 0.21
UBE3A-220ENST00000630424 FGFR1OPO95684 399 aaKnown RBP16.36■□□□□ 0.21
UBE3A-220ENST00000630424 IQCEQ6IPM2 695 aa16.36■□□□□ 0.21
UBE3A-220ENST00000630424 TTC21AQ8NDW8 1320 aa16.36■□□□□ 0.21
UBE3A-220ENST00000630424 FAM193AP78312 1265 aa16.36■□□□□ 0.21
UBE3A-220ENST00000630424 LRRC59Q96AG4 307 aaKnown RBP16.36■□□□□ 0.21
UBE3A-220ENST00000630424 PARP3Q9Y6F1 533 aa16.36■□□□□ 0.21
UBE3A-220ENST00000630424 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.36■□□□□ 0.216e-7■□□□□ 8.4
UBE3A-220ENST00000630424 TDRD12Q587J7 1177 aaKnown RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms