RNA–Protein interactions for RNA: ENST00000629380.2

SYNGAP1-208, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SYNGAP1, Length 9,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-208ENST00000629380 DZIP1Q86YF9 867 aaKnown RBP15.18■□□□□ 0.02
SYNGAP1-208ENST00000629380 DHX37Q8IY37 1157 aaKnown RBP15.18■□□□□ 0.02
SYNGAP1-208ENST00000629380 CTCFLQ8NI51 663 aaPredicted RBP15.18■□□□□ 0.02
SYNGAP1-208ENST00000629380 DDX46Q7L014 1031 aaKnown RBP15.17■□□□□ 0.02
SYNGAP1-208ENST00000629380 TTC14Q96N46 770 aa15.17■□□□□ 0.02
SYNGAP1-208ENST00000629380 CEP126Q9P2H0 1117 aa15.17■□□□□ 0.02
SYNGAP1-208ENST00000629380 ZNF518AQ6AHZ1 1483 aa15.17■□□□□ 0.02
SYNGAP1-208ENST00000629380 KIF4AO95239 1232 aa15.17■□□□□ 0.02
SYNGAP1-208ENST00000629380 SLC4A2P04920 1241 aa15.17■□□□□ 0.02
SYNGAP1-208ENST00000629380 HLTFQ14527 1009 aaKnown RBP eCLIP15.17■□□□□ 0.02
SYNGAP1-208ENST00000629380 CAVIN4Q5BKX8 364 aa15.17■□□□□ 0.02
SYNGAP1-208ENST00000629380 MAP3K1Q13233 1512 aa15.17■□□□□ 0.02
SYNGAP1-208ENST00000629380 FAM177BA6PVY3 158 aa15.17■□□□□ 0.02
SYNGAP1-208ENST00000629380 HSPA4P34932 840 aa15.17■□□□□ 0.02
SYNGAP1-208ENST00000629380 LRRC27Q9C0I9 530 aa15.17■□□□□ 0.02
SYNGAP1-208ENST00000629380 CHD1LQ86WJ1 897 aa15.17■□□□□ 0.02
SYNGAP1-208ENST00000629380 CLIP2Q9UDT6 1046 aa15.17■□□□□ 0.02
SYNGAP1-208ENST00000629380 NUDT16Q96DE0 195 aaKnown RBP15.17■□□□□ 0.02
SYNGAP1-208ENST00000629380 SPECC1Q5M775 1068 aa15.17■□□□□ 0.02
SYNGAP1-208ENST00000629380 WDR63Q8IWG1 891 aa15.17■□□□□ 0.02
SYNGAP1-208ENST00000629380 ESPNB1AK53 854 aa15.16■□□□□ 0.02
SYNGAP1-208ENST00000629380 BAG4O95429 457 aaKnown RBP15.16■□□□□ 0.02
SYNGAP1-208ENST00000629380 CCDC155Q8N6L0 562 aa15.16■□□□□ 0.02
SYNGAP1-208ENST00000629380 NAP1L3Q99457 506 aaPredicted RBP15.16■□□□□ 0.02
SYNGAP1-208ENST00000629380 ANKIB1Q9P2G1 1089 aa15.16■□□□□ 0.02
SYNGAP1-208ENST00000629380 A0A1W2PRG0 241 aa15.16■□□□□ 0.02
SYNGAP1-208ENST00000629380 CKAP4Q07065 602 aaKnown RBP15.16■□□□□ 0.02
SYNGAP1-208ENST00000629380 SYNCQ9H7C4 482 aa15.16■□□□□ 0.02
SYNGAP1-208ENST00000629380 LMAN1P49257 510 aa15.16■□□□□ 0.02
SYNGAP1-208ENST00000629380 BTBD11A6QL63 1104 aa15.16■□□□□ 0.02
SYNGAP1-208ENST00000629380 MAATS1Q7Z4T9 603 aa15.15■□□□□ 0.02
SYNGAP1-208ENST00000629380 TCP11L2Q8N4U5 519 aa15.15■□□□□ 0.02
SYNGAP1-208ENST00000629380 ERMNQ8TAM6 284 aa15.15■□□□□ 0.02
SYNGAP1-208ENST00000629380 PDZRN3Q9UPQ7 1066 aa15.15■□□□□ 0.02
SYNGAP1-208ENST00000629380 CWC27Q6UX04 472 aaKnown RBP15.15■□□□□ 0.02
SYNGAP1-208ENST00000629380 SMARCC1Q92922 1105 aaPredicted RBP15.15■□□□□ 0.02
SYNGAP1-208ENST00000629380 CALML4Q96GE6 196 aa15.15■□□□□ 0.02
SYNGAP1-208ENST00000629380 BRPF3Q9ULD4 1205 aa15.15■□□□□ 0.02
SYNGAP1-208ENST00000629380 PPP4R3BQ5MIZ7 849 aa15.15■□□□□ 0.02
SYNGAP1-208ENST00000629380 CATIPQ7Z7H3 387 aa15.15■□□□□ 0.02
SYNGAP1-208ENST00000629380 KIF4BQ2VIQ3 1234 aa15.15■□□□□ 0.02
SYNGAP1-208ENST00000629380 CCDC14Q49A88 953 aa15.15■□□□□ 0.02
SYNGAP1-208ENST00000629380 SYCE3A1L190 88 aa15.15■□□□□ 0.02
SYNGAP1-208ENST00000629380 SULT6B1Q6IMI4 303 aa15.15■□□□□ 0.02
SYNGAP1-208ENST00000629380 CCDC194A0A1B0GVG4 234 aa15.15■□□□□ 0.02
SYNGAP1-208ENST00000629380 SRGAP3O43295 1099 aa15.15■□□□□ 0.02
SYNGAP1-208ENST00000629380 KANK3Q6NY19 840 aa15.15■□□□□ 0.02
SYNGAP1-208ENST00000629380 MVPQ14764 893 aaKnown RBP15.15■□□□□ 0.02
SYNGAP1-208ENST00000629380 PUS7Q96PZ0 661 aaKnown RBP15.15■□□□□ 0.02
SYNGAP1-208ENST00000629380 WDR7Q9Y4E6 1490 aa15.15■□□□□ 0.02
SYNGAP1-208ENST00000629380 SLC12A7Q9Y666 1083 aa15.14■□□□□ 0.01
SYNGAP1-208ENST00000629380 POLR3DP05423 398 aaPredicted RBP15.14■□□□□ 0.01
SYNGAP1-208ENST00000629380 MKRN1Q9UHC7 482 aaKnown RBP15.14■□□□□ 0.01
SYNGAP1-208ENST00000629380 CCDC96Q2M329 555 aa15.14■□□□□ 0.01
SYNGAP1-208ENST00000629380 MSL1Q68DK7 614 aa15.14■□□□□ 0.01
SYNGAP1-208ENST00000629380 C8orf76Q96K31 380 aa15.14■□□□□ 0.01
SYNGAP1-208ENST00000629380 C1orf115Q9H7X2 142 aa15.14■□□□□ 0.01
SYNGAP1-208ENST00000629380 MCM5P33992 734 aa15.14■□□□□ 0.01
SYNGAP1-208ENST00000629380 HSF2BPO75031 334 aa15.14■□□□□ 0.01
SYNGAP1-208ENST00000629380 ODF2LQ9ULJ1 636 aa15.14■□□□□ 0.01
SYNGAP1-208ENST00000629380 KLHL10Q6JEL2 608 aa15.14■□□□□ 0.01
SYNGAP1-208ENST00000629380 NAPBQ9H115 298 aa15.14■□□□□ 0.01
SYNGAP1-208ENST00000629380 IVLP07476 585 aa15.13■□□□□ 0.01
SYNGAP1-208ENST00000629380 ASXL2Q76L83 1435 aa15.13■□□□□ 0.01
SYNGAP1-208ENST00000629380 KIF5AQ12840 1032 aa15.13■□□□□ 0.01
SYNGAP1-208ENST00000629380 PRKCSHP14314 528 aaPredicted RBP15.13■□□□□ 0.01
SYNGAP1-208ENST00000629380 GOLGA4Q13439 2230 aaKnown RBP15.13■□□□□ 0.01
SYNGAP1-208ENST00000629380 CEP135Q66GS9 1140 aa15.13■□□□□ 0.01
SYNGAP1-208ENST00000629380 IQCA1Q86XH1 822 aa15.13■□□□□ 0.01
SYNGAP1-208ENST00000629380 DNAJC5BQ9UF47 199 aa15.13■□□□□ 0.01
SYNGAP1-208ENST00000629380 PHF8Q9UPP1 1060 aa15.13■□□□□ 0.01
SYNGAP1-208ENST00000629380 TDRD12Q587J7 1177 aaKnown RBP15.13■□□□□ 0.01
SYNGAP1-208ENST00000629380 EIF2AK4Q9P2K8 1649 aaKnown RBP15.13■□□□□ 0.01
SYNGAP1-208ENST00000629380 GTPBP4Q9BZE4 634 aaKnown RBP15.13■□□□□ 0.01
SYNGAP1-208ENST00000629380 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.13■□□□□ 0.011e-6■■■■□ 24.9
SYNGAP1-208ENST00000629380 NKTRP30414 1462 aaKnown RBP15.13■□□□□ 0.01
SYNGAP1-208ENST00000629380 TUBB4BP68371 445 aa15.12■□□□□ 0.01
SYNGAP1-208ENST00000629380 ATF7IPQ6VMQ6 1270 aa15.12■□□□□ 0.01
SYNGAP1-208ENST00000629380 SYCP3Q8IZU3 236 aa15.12■□□□□ 0.01
SYNGAP1-208ENST00000629380 GNAT3A8MTJ3 354 aa15.12■□□□□ 0.01
SYNGAP1-208ENST00000629380 SSRP1Q08945 709 aaKnown RBP15.12■□□□□ 0.01
SYNGAP1-208ENST00000629380 WDR66Q8TBY9 1149 aa15.12■□□□□ 0.01
SYNGAP1-208ENST00000629380 KIAA1524Q8TCG1 905 aa15.12■□□□□ 0.01
SYNGAP1-208ENST00000629380 IDH1O75874 414 aaKnown RBP15.12■□□□□ 0.01
SYNGAP1-208ENST00000629380 SMC6Q96SB8 1091 aa15.12■□□□□ 0.01
SYNGAP1-208ENST00000629380 TEX13AQ9BXU3 409 aaPredicted RBP15.12■□□□□ 0.01
SYNGAP1-208ENST00000629380 JAKMIP2Q96AA8 810 aa15.12■□□□□ 0.01
SYNGAP1-208ENST00000629380 TCP11L1Q9NUJ3 509 aa15.12■□□□□ 0.01
SYNGAP1-208ENST00000629380 SLC5A1P13866 664 aa15.12■□□□□ 0.01
SYNGAP1-208ENST00000629380 MYL6BP14649 208 aa15.12■□□□□ 0.01
SYNGAP1-208ENST00000629380 RMND1Q9NWS8 449 aa15.11■□□□□ 0.01
SYNGAP1-208ENST00000629380 NCOA1Q15788 1441 aa15.11■□□□□ 0.01
SYNGAP1-208ENST00000629380 ATP2A1O14983 1001 aa15.11■□□□□ 0.01
SYNGAP1-208ENST00000629380 MAP3K12Q12852 859 aa15.11■□□□□ 0.01
SYNGAP1-208ENST00000629380 MAP7D1Q3KQU3 841 aa15.11■□□□□ 0.01
SYNGAP1-208ENST00000629380 UTP14AQ9BVJ6 771 aaKnown RBP15.11■□□□□ 0.01
SYNGAP1-208ENST00000629380 MKNK2Q9HBH9 465 aa15.11■□□□□ 0.01
SYNGAP1-208ENST00000629380 CCDC174Q6PII3 467 aa15.11■□□□□ 0.01
SYNGAP1-208ENST00000629380 PSMD1Q99460 953 aa15.11■□□□□ 0.01
SYNGAP1-208ENST00000629380 DUOX2Q9NRD8 1548 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms