RNA–Protein interactions for RNA: ENST00000629219.1

PKP4-218, Transcript of plakophilin 4, humanhuman

TSL 5 BASIC

Gene PKP4, Length 162 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-218ENST00000629219 BCS1LQ9Y276 419 aa11.9□□□□□ -0.5
PKP4-218ENST00000629219 SBF1O95248 1867 aa11.89□□□□□ -0.51
PKP4-218ENST00000629219 COL11A2P13942 1736 aaPredicted RBP11.89□□□□□ -0.51
PKP4-218ENST00000629219 ZNF316A6NFI3 1004 aaPredicted RBP11.89□□□□□ -0.51
PKP4-218ENST00000629219 CHL1O00533 1208 aa11.89□□□□□ -0.51
PKP4-218ENST00000629219 HOXB7P09629 217 aa11.89□□□□□ -0.51
PKP4-218ENST00000629219 PDE6BP35913 854 aa11.89□□□□□ -0.51
PKP4-218ENST00000629219 COL13A1Q5TAT6 717 aaPredicted RBP11.89□□□□□ -0.51
PKP4-218ENST00000629219 ARHGAP27Q6ZUM4 889 aa11.89□□□□□ -0.51
PKP4-218ENST00000629219 THUMPD2Q9BTF0 503 aaKnown RBP11.89□□□□□ -0.51
PKP4-218ENST00000629219 TRIM35Q9UPQ4 493 aa11.89□□□□□ -0.51
PKP4-218ENST00000629219 ZC3H4Q9UPT8 1303 aaKnown RBP11.88□□□□□ -0.51
PKP4-218ENST00000629219 RIC1Q4ADV7 1423 aa11.88□□□□□ -0.51
PKP4-218ENST00000629219 CALD1Q05682 793 aaKnown RBP11.88□□□□□ -0.51
PKP4-218ENST00000629219 PRR5LQ6MZQ0 368 aa11.88□□□□□ -0.51
PKP4-218ENST00000629219 MIS18AQ9NYP9 233 aa11.88□□□□□ -0.51
PKP4-218ENST00000629219 H0YIN7 160 aa11.87□□□□□ -0.51
PKP4-218ENST00000629219 ST5P78524 1137 aa11.87□□□□□ -0.51
PKP4-218ENST00000629219 LRP10Q7Z4F1 713 aa11.87□□□□□ -0.51
PKP4-218ENST00000629219 CNBD1Q8NA66 436 aa11.87□□□□□ -0.51
PKP4-218ENST00000629219 ZNF330Q9Y3S2 320 aaPredicted RBP11.87□□□□□ -0.51
PKP4-218ENST00000629219 ANKRD36CQ5JPF3 1778 aa11.87□□□□□ -0.51
PKP4-218ENST00000629219 FER1L6Q2WGJ9 1857 aa11.87□□□□□ -0.51
PKP4-218ENST00000629219 MAP3K15Q6ZN16 1313 aa11.86□□□□□ -0.51
PKP4-218ENST00000629219 KLRG2A4D1S0 409 aaPredicted RBP11.86□□□□□ -0.51
PKP4-218ENST00000629219 CHRNA5P30532 468 aa11.86□□□□□ -0.51
PKP4-218ENST00000629219 TTLL6Q8N841 843 aa11.86□□□□□ -0.51
PKP4-218ENST00000629219 CFAP44Q96MT7 982 aa11.86□□□□□ -0.51
PKP4-218ENST00000629219 DICER1Q9UPY3 1922 aaKnown RBP11.86□□□□□ -0.51
PKP4-218ENST00000629219 ZNF853P0CG23 659 aa11.85□□□□□ -0.51
PKP4-218ENST00000629219 CCDC27Q2M243 656 aa11.85□□□□□ -0.51
PKP4-218ENST00000629219 C9orf131Q5VYM1 1079 aa11.85□□□□□ -0.51
PKP4-218ENST00000629219 STYK1Q6J9G0 422 aa11.85□□□□□ -0.51
PKP4-218ENST00000629219 TPTE2Q6XPS3 522 aa11.85□□□□□ -0.51
PKP4-218ENST00000629219 KIF6Q6ZMV9 814 aa11.85□□□□□ -0.51
PKP4-218ENST00000629219 BICDL1Q6ZP65 573 aa11.85□□□□□ -0.51
PKP4-218ENST00000629219 C2CD5Q86YS7 1000 aa11.85□□□□□ -0.51
PKP4-218ENST00000629219 CCDC146Q8IYE0 955 aa11.85□□□□□ -0.51
PKP4-218ENST00000629219 NYXQ9GZU5 481 aa11.85□□□□□ -0.51
PKP4-218ENST00000629219 IFT57Q9NWB7 429 aa11.85□□□□□ -0.51
PKP4-218ENST00000629219 RNF123Q5XPI4 1314 aa11.85□□□□□ -0.51
PKP4-218ENST00000629219 CAPN15O75808 1086 aa11.84□□□□□ -0.51
PKP4-218ENST00000629219 SRGNP10124 158 aa11.84□□□□□ -0.51
PKP4-218ENST00000629219 PIP4K2AP48426 406 aaPredicted RBP11.84□□□□□ -0.51
PKP4-218ENST00000629219 PDIA6Q15084 440 aa11.84□□□□□ -0.51
PKP4-218ENST00000629219 SOGA3Q5TF21 947 aa11.84□□□□□ -0.51
PKP4-218ENST00000629219 NBPF5PQ86XG9 351 aaPredicted RBP11.84□□□□□ -0.51
PKP4-218ENST00000629219 LTBP3Q9NS15 1303 aa11.84□□□□□ -0.51
PKP4-218ENST00000629219 WDR90Q96KV7 1748 aa11.83□□□□□ -0.52
PKP4-218ENST00000629219 GIGYF2Q6Y7W6 1299 aaKnown RBP11.83□□□□□ -0.52
PKP4-218ENST00000629219 RBM46Q8TBY0 533 aaKnown RBP11.83□□□□□ -0.52
PKP4-218ENST00000629219 CNKSR1Q969H4 720 aa11.83□□□□□ -0.52
PKP4-218ENST00000629219 KLRG1Q96E93 195 aa11.83□□□□□ -0.52
PKP4-218ENST00000629219 MASTLQ96GX5 879 aa11.83□□□□□ -0.52
PKP4-218ENST00000629219 CHMP4AQ9BY43 222 aa11.83□□□□□ -0.52
PKP4-218ENST00000629219 DDX21Q9NR30 783 aaKnown RBP eCLIP11.83□□□□□ -0.52
PKP4-218ENST00000629219 NIP7Q9Y221 180 aaKnown RBP eCLIP11.83□□□□□ -0.52
PKP4-218ENST00000629219 RRP7AQ9Y3A4 280 aaKnown RBP11.83□□□□□ -0.52
PKP4-218ENST00000629219 TNRC6CQ9HCJ0 1690 aaKnown RBP11.82□□□□□ -0.52
PKP4-218ENST00000629219 SLX4Q8IY92 1834 aa11.82□□□□□ -0.52
PKP4-218ENST00000629219 ANP32CO43423 234 aa11.82□□□□□ -0.52
PKP4-218ENST00000629219 GNAI1P63096 354 aa11.82□□□□□ -0.52
PKP4-218ENST00000629219 NEUROD2Q15784 382 aa11.82□□□□□ -0.52
PKP4-218ENST00000629219 HLFQ16534 295 aa11.82□□□□□ -0.52
PKP4-218ENST00000629219 PARP10Q53GL7 1025 aa11.82□□□□□ -0.52
PKP4-218ENST00000629219 HSP90AB3PQ58FF7 597 aa11.82□□□□□ -0.52
PKP4-218ENST00000629219 RRAGCQ9HB90 399 aa11.82□□□□□ -0.52
PKP4-218ENST00000629219 CACNA1SQ13698 1873 aa11.82□□□□□ -0.52
PKP4-218ENST00000629219 CCDC88AQ3V6T2 1871 aa11.82□□□□□ -0.52
PKP4-218ENST00000629219 TIAM2Q8IVF5 1701 aa11.81□□□□□ -0.52
PKP4-218ENST00000629219 APAF1O14727 1248 aa11.81□□□□□ -0.52
PKP4-218ENST00000629219 NPHP1O15259 732 aa11.81□□□□□ -0.52
PKP4-218ENST00000629219 NPR1P16066 1061 aa11.81□□□□□ -0.52
PKP4-218ENST00000629219 LMNB1P20700 586 aa11.81□□□□□ -0.52
PKP4-218ENST00000629219 CRY2Q49AN0 593 aa11.81□□□□□ -0.52
PKP4-218ENST00000629219 TTLL7Q6ZT98 887 aa11.81□□□□□ -0.52
PKP4-218ENST00000629219 ZNF34Q8IZ26 560 aa11.81□□□□□ -0.52
PKP4-218ENST00000629219 JMYQ8N9B5 988 aa11.81□□□□□ -0.52
PKP4-218ENST00000629219 CACNA1FO60840 1977 aa11.81□□□□□ -0.52
PKP4-218ENST00000629219 MYL6BP14649 208 aa11.8□□□□□ -0.52
PKP4-218ENST00000629219 NGEFQ8N5V2 710 aa11.8□□□□□ -0.52
PKP4-218ENST00000629219 RNF181Q9P0P0 153 aa11.8□□□□□ -0.52
PKP4-218ENST00000629219 DBF4Q9UBU7 674 aaPredicted RBP11.8□□□□□ -0.52
PKP4-218ENST00000629219 IL16Q14005 1332 aa11.8□□□□□ -0.52
PKP4-218ENST00000629219 EIF2S2P20042 333 aaKnown RBP11.79□□□□□ -0.52
PKP4-218ENST00000629219 PPP1R42Q7Z4L9 355 aa11.79□□□□□ -0.52
PKP4-218ENST00000629219 C16orf71Q8IYS4 520 aaPredicted RBP11.79□□□□□ -0.52
PKP4-218ENST00000629219 ZNF622Q969S3 477 aaKnown RBP eCLIP11.79□□□□□ -0.52
PKP4-218ENST00000629219 MBIPQ9NS73 344 aa11.79□□□□□ -0.52
PKP4-218ENST00000629219 UBN2Q6ZU65 1347 aa11.79□□□□□ -0.52
PKP4-218ENST00000629219 NFKBIEO00221 500 aa11.78□□□□□ -0.52
PKP4-218ENST00000629219 NTSR2O95665 410 aa11.78□□□□□ -0.52
PKP4-218ENST00000629219 ALDH1B1P30837 517 aa11.78□□□□□ -0.52
PKP4-218ENST00000629219 HOXA10P31260 410 aaPredicted RBP11.78□□□□□ -0.52
PKP4-218ENST00000629219 FSTL1Q12841 308 aa11.78□□□□□ -0.52
PKP4-218ENST00000629219 GRIPAP1Q4V328 841 aa11.78□□□□□ -0.52
PKP4-218ENST00000629219 HDGFL1Q5TGJ6 251 aa11.78□□□□□ -0.52
PKP4-218ENST00000629219 PRPF40BQ6NWY9 871 aaKnown RBP11.78□□□□□ -0.52
PKP4-218ENST00000629219 C7orf43Q8WVR3 580 aa11.78□□□□□ -0.52
PKP4-218ENST00000629219 HYPKQ9NX55 129 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms