RNA–Protein interactions for RNA: ENST00000628401.1

NPTN-IT1-201, NPTN intronic transcript 1, humanhuman

BASIC

Gene NPTN-IT1, Length 2,283 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPTN-IT1-201ENST00000628401 BEND3Q5T5X7 828 aa16.27■□□□□ 0.2
NPTN-IT1-201ENST00000628401 TSHZ3Q63HK5 1081 aa16.27■□□□□ 0.2
NPTN-IT1-201ENST00000628401 ZNF790Q6PG37 636 aa16.27■□□□□ 0.2
NPTN-IT1-201ENST00000628401 CHMP4AQ9BY43 222 aa16.27■□□□□ 0.2
NPTN-IT1-201ENST00000628401 BCL11BQ9C0K0 894 aaPredicted RBP16.27■□□□□ 0.2
NPTN-IT1-201ENST00000628401 SCN11AQ9UI33 1791 aa16.27■□□□□ 0.19
NPTN-IT1-201ENST00000628401 NOL7Q9UMY1 257 aaKnown RBP16.26■□□□□ 0.19
NPTN-IT1-201ENST00000628401 MAP3K2Q9Y2U5 619 aa16.26■□□□□ 0.19
NPTN-IT1-201ENST00000628401 CPDO75976 1380 aa16.26■□□□□ 0.19
NPTN-IT1-201ENST00000628401 HEG1Q9ULI3 1381 aa16.26■□□□□ 0.19
NPTN-IT1-201ENST00000628401 AK9Q5TCS8 1911 aa16.26■□□□□ 0.19
NPTN-IT1-201ENST00000628401 ST18O60284 1047 aa16.26■□□□□ 0.19
NPTN-IT1-201ENST00000628401 MCTP1Q6DN14 999 aa16.26■□□□□ 0.19
NPTN-IT1-201ENST00000628401 ZHX1Q9UKY1 873 aaPredicted RBP16.26■□□□□ 0.19
NPTN-IT1-201ENST00000628401 R3HCC1Q9Y3T6 440 aaKnown RBP16.26■□□□□ 0.19
NPTN-IT1-201ENST00000628401 ADAMTS7Q9UKP4 1686 aa16.26■□□□□ 0.19
NPTN-IT1-201ENST00000628401 ZSCAN20P17040 1043 aaPredicted RBP16.25■□□□□ 0.19
NPTN-IT1-201ENST00000628401 SDSP20132 328 aa16.25■□□□□ 0.19
NPTN-IT1-201ENST00000628401 TOM1L2Q6ZVM7 507 aa16.25■□□□□ 0.19
NPTN-IT1-201ENST00000628401 IPO4Q8TEX9 1081 aaKnown RBP16.25■□□□□ 0.19
NPTN-IT1-201ENST00000628401 LRRCC1Q9C099 1032 aa16.25■□□□□ 0.19
NPTN-IT1-201ENST00000628401 LMBRD1Q9NUN5 540 aa16.25■□□□□ 0.19
NPTN-IT1-201ENST00000628401 SOS2Q07890 1332 aaPredicted RBP16.25■□□□□ 0.19
NPTN-IT1-201ENST00000628401 MYL6BP14649 208 aa16.24■□□□□ 0.19
NPTN-IT1-201ENST00000628401 SASS6Q6UVJ0 657 aa16.24■□□□□ 0.19
NPTN-IT1-201ENST00000628401 PPP1R42Q7Z4L9 355 aa16.24■□□□□ 0.19
NPTN-IT1-201ENST00000628401 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.24■□□□□ 0.19
NPTN-IT1-201ENST00000628401 NAP1L2Q9ULW6 460 aaPredicted RBP16.24■□□□□ 0.19
NPTN-IT1-201ENST00000628401 STRN4Q9NRL3 753 aa16.24■□□□□ 0.19
NPTN-IT1-201ENST00000628401 REC8O95072 547 aa16.23■□□□□ 0.19
NPTN-IT1-201ENST00000628401 PIP4K2AP48426 406 aaPredicted RBP16.23■□□□□ 0.19
NPTN-IT1-201ENST00000628401 PDE1AP54750 535 aa16.23■□□□□ 0.19
NPTN-IT1-201ENST00000628401 CWF19L2Q2TBE0 894 aaKnown RBP16.23■□□□□ 0.19
NPTN-IT1-201ENST00000628401 ZSCAN23Q3MJ62 389 aa16.23■□□□□ 0.19
NPTN-IT1-201ENST00000628401 PPP4R3BQ5MIZ7 849 aa16.23■□□□□ 0.19
NPTN-IT1-201ENST00000628401 ZNF496Q96IT1 587 aaPredicted RBP16.23■□□□□ 0.19
NPTN-IT1-201ENST00000628401 DCAF5Q96JK2 942 aa16.22■□□□□ 0.19
NPTN-IT1-201ENST00000628401 IL1RAPL2Q9NP60 686 aa16.22■□□□□ 0.19
NPTN-IT1-201ENST00000628401 C5P01031 1676 aa16.22■□□□□ 0.19
NPTN-IT1-201ENST00000628401 SRGAP3O43295 1099 aa16.22■□□□□ 0.19
NPTN-IT1-201ENST00000628401 CAVIN1Q6NZI2 390 aaKnown RBP16.22■□□□□ 0.19
NPTN-IT1-201ENST00000628401 KSR2Q6VAB6 950 aa16.22■□□□□ 0.19
NPTN-IT1-201ENST00000628401 TTC5Q8N0Z6 440 aa16.22■□□□□ 0.19
NPTN-IT1-201ENST00000628401 HYPKQ9NX55 129 aa16.22■□□□□ 0.19
NPTN-IT1-201ENST00000628401 WDR17Q8IZU2 1322 aa16.22■□□□□ 0.19
NPTN-IT1-201ENST00000628401 CABP4P57796 275 aa16.21■□□□□ 0.19
NPTN-IT1-201ENST00000628401 PDIA6Q15084 440 aa16.21■□□□□ 0.19
NPTN-IT1-201ENST00000628401 DDX21Q9NR30 783 aaKnown RBP eCLIP16.21■□□□□ 0.19
NPTN-IT1-201ENST00000628401 ABCC6O95255 1503 aa16.21■□□□□ 0.19
NPTN-IT1-201ENST00000628401 SURF6O75683 361 aaKnown RBP16.21■□□□□ 0.19
NPTN-IT1-201ENST00000628401 SSH3Q8TE77 659 aa16.21■□□□□ 0.19
NPTN-IT1-201ENST00000628401 C9orf78Q9NZ63 289 aaPredicted RBP16.21■□□□□ 0.19
NPTN-IT1-201ENST00000628401 PKD1L3Q7Z443 1732 aa16.2■□□□□ 0.18
NPTN-IT1-201ENST00000628401 PDLIM2Q96JY6 352 aa16.2■□□□□ 0.18
NPTN-IT1-201ENST00000628401 USP16Q9Y5T5 823 aa16.2■□□□□ 0.18
NPTN-IT1-201ENST00000628401 MX1P20591 662 aa16.19■□□□□ 0.18
NPTN-IT1-201ENST00000628401 ERC2O15083 957 aa16.19■□□□□ 0.18
NPTN-IT1-201ENST00000628401 EVA1CP58658 441 aa16.19■□□□□ 0.18
NPTN-IT1-201ENST00000628401 RIC3Q7Z5B4 369 aa16.19■□□□□ 0.18
NPTN-IT1-201ENST00000628401 ZCRB1Q8TBF4 217 aaKnown RBP16.19■□□□□ 0.18
NPTN-IT1-201ENST00000628401 COL5A2P05997 1499 aaPredicted RBP16.19■□□□□ 0.18
NPTN-IT1-201ENST00000628401 DDX58O95786 925 aaKnown RBP16.18■□□□□ 0.18
NPTN-IT1-201ENST00000628401 POLA2Q14181 598 aa16.18■□□□□ 0.18
NPTN-IT1-201ENST00000628401 LARP1Q6PKG0 1096 aaKnown RBP16.18■□□□□ 0.18
NPTN-IT1-201ENST00000628401 NUTM1Q86Y26 1132 aa16.18■□□□□ 0.18
NPTN-IT1-201ENST00000628401 DDX54Q8TDD1 881 aaKnown RBP16.18■□□□□ 0.18
NPTN-IT1-201ENST00000628401 XAGE3Q8WTP9 111 aa16.18■□□□□ 0.18
NPTN-IT1-201ENST00000628401 OSBPL3Q9H4L5 887 aa16.18■□□□□ 0.18
NPTN-IT1-201ENST00000628401 RBSNQ9H1K0 784 aa16.17■□□□□ 0.18
NPTN-IT1-201ENST00000628401 SALL3Q9BXA9 1300 aa16.17■□□□□ 0.18
NPTN-IT1-201ENST00000628401 ABCA3Q99758 1704 aa16.17■□□□□ 0.18
NPTN-IT1-201ENST00000628401 PRPF40AO75400 957 aaKnown RBP16.17■□□□□ 0.18
NPTN-IT1-201ENST00000628401 SNRPA1P09661 255 aaKnown RBP16.17■□□□□ 0.18
NPTN-IT1-201ENST00000628401 MCM2P49736 904 aa16.17■□□□□ 0.18
NPTN-IT1-201ENST00000628401 PKP1Q13835 747 aa16.17■□□□□ 0.18
NPTN-IT1-201ENST00000628401 COPS6Q7L5N1 327 aa16.17■□□□□ 0.18
NPTN-IT1-201ENST00000628401 TRIM6-TRIM34B2RNG4 842 aa16.16■□□□□ 0.18
NPTN-IT1-201ENST00000628401 ALDH1L1O75891 902 aa16.16■□□□□ 0.18
NPTN-IT1-201ENST00000628401 ZGPATQ8N5A5 531 aaKnown RBP16.16■□□□□ 0.18
NPTN-IT1-201ENST00000628401 RILPL2Q969X0 211 aa16.16■□□□□ 0.18
NPTN-IT1-201ENST00000628401 FMNL2Q96PY5 1086 aa16.16■□□□□ 0.18
NPTN-IT1-201ENST00000628401 ZKSCAN5Q9Y2L8 839 aa16.16■□□□□ 0.18
NPTN-IT1-201ENST00000628401 PRIM1P49642 420 aaKnown RBP16.16■□□□□ 0.18
NPTN-IT1-201ENST00000628401 LRSAM1Q6UWE0 723 aa16.16■□□□□ 0.18
NPTN-IT1-201ENST00000628401 GPT2Q8TD30 523 aa16.16■□□□□ 0.18
NPTN-IT1-201ENST00000628401 ZDHHC9Q9Y397 364 aa16.16■□□□□ 0.18
NPTN-IT1-201ENST00000628401 MRC1P22897 1456 aa16.16■□□□□ 0.18
NPTN-IT1-201ENST00000628401 OS9Q13438 667 aaPredicted RBP16.15■□□□□ 0.18
NPTN-IT1-201ENST00000628401 LINS1Q8NG48 757 aa16.15■□□□□ 0.18
NPTN-IT1-201ENST00000628401 RHPN1Q8TCX5 695 aa16.15■□□□□ 0.18
NPTN-IT1-201ENST00000628401 PRDM10Q9NQV6 1147 aa16.15■□□□□ 0.18
NPTN-IT1-201ENST00000628401 PCDH11XQ9BZA7 1347 aa16.15■□□□□ 0.18
NPTN-IT1-201ENST00000628401 PCDH11YQ9BZA8 1340 aa16.15■□□□□ 0.18
NPTN-IT1-201ENST00000628401 PARP4Q9UKK3 1724 aaKnown RBP16.15■□□□□ 0.18
NPTN-IT1-201ENST00000628401 MBD3O95983 291 aa16.15■□□□□ 0.18
NPTN-IT1-201ENST00000628401 IL2RBP14784 551 aa16.15■□□□□ 0.18
NPTN-IT1-201ENST00000628401 GRM8O00222 908 aa16.14■□□□□ 0.17
NPTN-IT1-201ENST00000628401 RAB11FIP3O75154 756 aa16.14■□□□□ 0.17
NPTN-IT1-201ENST00000628401 IGKV5-2P06315 115 aa16.14■□□□□ 0.17
NPTN-IT1-201ENST00000628401 SUCLG2Q96I99 432 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 107.9 ms