RNA–Protein interactions for RNA: ENST00000628401.1

NPTN-IT1-201, NPTN intronic transcript 1, humanhuman

BASIC

Gene NPTN-IT1, Length 2,283 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPTN-IT1-201ENST00000628401 NISCHQ9Y2I1 1504 aa28.58■■■□□ 2.17
NPTN-IT1-201ENST00000628401 CCDC180Q9P1Z9 1646 aa24.59■■□□□ 1.53
NPTN-IT1-201ENST00000628401 ZCCHC6Q5VYS8 1495 aaKnown RBP24.07■■□□□ 1.44
NPTN-IT1-201ENST00000628401 SHROOM4Q9ULL8 1493 aa23.99■■□□□ 1.43
NPTN-IT1-201ENST00000628401 DCAF8L2P0C7V8 631 aa23.85■■□□□ 1.41
NPTN-IT1-201ENST00000628401 DCAF1Q9Y4B6 1507 aa23.45■■□□□ 1.34
NPTN-IT1-201ENST00000628401 SUPT5HO00267 1087 aaKnown RBP23.27■■□□□ 1.32
NPTN-IT1-201ENST00000628401 ABCC9O60706 1549 aa23.2■■□□□ 1.3
NPTN-IT1-201ENST00000628401 MYO15BQ96JP2 1530 aa22.96■■□□□ 1.27
NPTN-IT1-201ENST00000628401 SCRIBQ14160 1630 aa22.95■■□□□ 1.26
NPTN-IT1-201ENST00000628401 NACADO15069 1562 aa22.83■■□□□ 1.25
NPTN-IT1-201ENST00000628401 RB1CC1Q8TDY2 1594 aa22.59■■□□□ 1.21
NPTN-IT1-201ENST00000628401 RSF1Q96T23 1441 aaPredicted RBP22.4■■□□□ 1.18
NPTN-IT1-201ENST00000628401 CHIC1Q5VXU3 224 aa22.34■■□□□ 1.17
NPTN-IT1-201ENST00000628401 CECR2Q9BXF3 1484 aa22.32■■□□□ 1.16
NPTN-IT1-201ENST00000628401 PELP1Q8IZL8 1130 aaKnown RBP22.28■■□□□ 1.16
NPTN-IT1-201ENST00000628401 UNC13AQ9UPW8 1703 aa22.25■■□□□ 1.15
NPTN-IT1-201ENST00000628401 MROH2BQ7Z745 1585 aa22.19■■□□□ 1.14
NPTN-IT1-201ENST00000628401 WIZO95785 1651 aa22.07■■□□□ 1.12
NPTN-IT1-201ENST00000628401 PABPN1Q86U42 306 aaKnown RBP eCLIP22.06■■□□□ 1.12
NPTN-IT1-201ENST00000628401 BAZ1AQ9NRL2 1556 aaPredicted RBP22■■□□□ 1.11
NPTN-IT1-201ENST00000628401 HRCP23327 699 aa21.97■■□□□ 1.11
NPTN-IT1-201ENST00000628401 BICRAQ9NZM4 1560 aa21.97■■□□□ 1.11
NPTN-IT1-201ENST00000628401 SMARCA4P51532 1647 aa21.89■■□□□ 1.1
NPTN-IT1-201ENST00000628401 MYT1Q01538 1121 aa21.71■■□□□ 1.07
NPTN-IT1-201ENST00000628401 TRIM41Q8WV44 630 aa21.71■■□□□ 1.07
NPTN-IT1-201ENST00000628401 TOP2AP11388 1531 aaKnown RBP21.71■■□□□ 1.07
NPTN-IT1-201ENST00000628401 LOC105371045A0A1W2PR82 267 aa21.67■■□□□ 1.06
NPTN-IT1-201ENST00000628401 PCGF6Q9BYE7 350 aa21.64■■□□□ 1.05
NPTN-IT1-201ENST00000628401 CCDC88BA6NC98 1476 aa21.59■■□□□ 1.05
NPTN-IT1-201ENST00000628401 SMARCA2P51531 1590 aa21.57■■□□□ 1.04
NPTN-IT1-201ENST00000628401 FAM9AQ8IZU1 332 aaPredicted RBP21.52■■□□□ 1.04
NPTN-IT1-201ENST00000628401 EIF4G1Q04637 1599 aaKnown RBP21.52■■□□□ 1.04
NPTN-IT1-201ENST00000628401 PEG3Q9GZU2 1588 aa21.48■■□□□ 1.03
NPTN-IT1-201ENST00000628401 ATAD2BQ9ULI0 1458 aa21.44■■□□□ 1.02
NPTN-IT1-201ENST00000628401 ABCC8Q09428 1581 aa21.38■■□□□ 1.01
NPTN-IT1-201ENST00000628401 EHMT2Q96KQ7 1210 aa21.37■■□□□ 1.01
NPTN-IT1-201ENST00000628401 BAZ1BQ9UIG0 1483 aaKnown RBP21.37■■□□□ 1.01
NPTN-IT1-201ENST00000628401 PPARGC1BQ86YN6 1023 aaKnown RBP21.3■■□□□ 1
NPTN-IT1-201ENST00000628401 TRIM26Q12899 539 aaPredicted RBP21.26■□□□□ 0.99
NPTN-IT1-201ENST00000628401 NCAPD3P42695 1498 aa21.11■□□□□ 0.97
NPTN-IT1-201ENST00000628401 HMGXB3Q12766 1538 aa21.08■□□□□ 0.97
NPTN-IT1-201ENST00000628401 WRNQ14191 1432 aaPredicted RBP eCLIP21.07■□□□□ 0.96
NPTN-IT1-201ENST00000628401 SOGA1O94964 1423 aa21.05■□□□□ 0.96
NPTN-IT1-201ENST00000628401 ZEB1P37275 1124 aaPredicted RBP21.03■□□□□ 0.96
NPTN-IT1-201ENST00000628401 SYNJ1O43426 1573 aa21■□□□□ 0.95
NPTN-IT1-201ENST00000628401 RUSC2Q8N2Y8 1516 aa20.98■□□□□ 0.95
NPTN-IT1-201ENST00000628401 CC2D2AQ9P2K1 1620 aa20.9■□□□□ 0.94
NPTN-IT1-201ENST00000628401 CSRNP3Q8WYN3 585 aa20.88■□□□□ 0.93
NPTN-IT1-201ENST00000628401 SCAF1Q9H7N4 1312 aaKnown RBP20.88■□□□□ 0.93
NPTN-IT1-201ENST00000628401 EEA1Q15075 1411 aa20.86■□□□□ 0.93
NPTN-IT1-201ENST00000628401 CFTRP13569 1480 aa20.79■□□□□ 0.92
NPTN-IT1-201ENST00000628401 TOP2BQ02880 1626 aa20.79■□□□□ 0.92
NPTN-IT1-201ENST00000628401 UBTFP17480 764 aaKnown RBP20.77■□□□□ 0.92
NPTN-IT1-201ENST00000628401 BIVM-ERCC5R4GMW8 1640 aa20.73■□□□□ 0.91
NPTN-IT1-201ENST00000628401 CEP162Q5TB80 1403 aa20.71■□□□□ 0.91
NPTN-IT1-201ENST00000628401 TNIKQ9UKE5 1360 aa20.7■□□□□ 0.9
NPTN-IT1-201ENST00000628401 CUX1P39880 1505 aa20.7■□□□□ 0.9
NPTN-IT1-201ENST00000628401 GOLGA3Q08378 1498 aa20.7■□□□□ 0.9
NPTN-IT1-201ENST00000628401 CADPSQ9ULU8 1353 aa20.67■□□□□ 0.9
NPTN-IT1-201ENST00000628401 PRDM2Q13029 1718 aa20.66■□□□□ 0.9
NPTN-IT1-201ENST00000628401 CEP164Q9UPV0 1460 aa20.64■□□□□ 0.89
NPTN-IT1-201ENST00000628401 KIF21BO75037 1637 aa20.61■□□□□ 0.89
NPTN-IT1-201ENST00000628401 TTBK1Q5TCY1 1321 aaPredicted RBP20.61■□□□□ 0.89
NPTN-IT1-201ENST00000628401 RAPGEF2Q9Y4G8 1499 aa20.57■□□□□ 0.88
NPTN-IT1-201ENST00000628401 RANGAP1P46060 587 aaPredicted RBP20.52■□□□□ 0.88
NPTN-IT1-201ENST00000628401 NESP48681 1621 aa20.5■□□□□ 0.87
NPTN-IT1-201ENST00000628401 FANCD2Q9BXW9 1451 aa20.48■□□□□ 0.87
NPTN-IT1-201ENST00000628401 DNAJC5BQ9UF47 199 aa20.47■□□□□ 0.87
NPTN-IT1-201ENST00000628401 KIF27Q86VH2 1401 aa20.47■□□□□ 0.87
NPTN-IT1-201ENST00000628401 CLIP1P30622 1438 aa20.44■□□□□ 0.86
NPTN-IT1-201ENST00000628401 FGD5Q6ZNL6 1462 aa20.42■□□□□ 0.86
NPTN-IT1-201ENST00000628401 PRXQ9BXM0 1461 aa20.41■□□□□ 0.86
NPTN-IT1-201ENST00000628401 CUX2O14529 1486 aa20.4■□□□□ 0.86
NPTN-IT1-201ENST00000628401 ACIN1Q9UKV3 1341 aaKnown RBP20.37■□□□□ 0.85
NPTN-IT1-201ENST00000628401 ERICH3Q5RHP9 1530 aa20.37■□□□□ 0.85
NPTN-IT1-201ENST00000628401 LAMC3Q9Y6N6 1575 aa20.32■□□□□ 0.84
NPTN-IT1-201ENST00000628401 DNMBPQ6XZF7 1577 aa20.31■□□□□ 0.84
NPTN-IT1-201ENST00000628401 TOPBP1Q92547 1522 aa20.29■□□□□ 0.84
NPTN-IT1-201ENST00000628401 IGF1RP08069 1367 aa20.28■□□□□ 0.84
NPTN-IT1-201ENST00000628401 RAD54L2Q9Y4B4 1467 aa20.27■□□□□ 0.84
NPTN-IT1-201ENST00000628401 VPS8Q8N3P4 1428 aa20.27■□□□□ 0.84
NPTN-IT1-201ENST00000628401 CCER1Q8TC90 406 aaPredicted RBP20.25■□□□□ 0.83
NPTN-IT1-201ENST00000628401 POLA1P09884 1462 aaPredicted RBP20.25■□□□□ 0.83
NPTN-IT1-201ENST00000628401 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.23■□□□□ 0.83
NPTN-IT1-201ENST00000628401 URB2Q14146 1524 aaKnown RBP20.21■□□□□ 0.83
NPTN-IT1-201ENST00000628401 CARMIL1Q5VZK9 1371 aa20.2■□□□□ 0.82
NPTN-IT1-201ENST00000628401 PDS5BQ9NTI5 1447 aa20.19■□□□□ 0.82
NPTN-IT1-201ENST00000628401 APLP2Q06481 763 aa20.19■□□□□ 0.82
NPTN-IT1-201ENST00000628401 KIF21AQ7Z4S6 1674 aa20.18■□□□□ 0.82
NPTN-IT1-201ENST00000628401 CENPBP07199 599 aaPredicted RBP20.18■□□□□ 0.82
NPTN-IT1-201ENST00000628401 ARAP1Q96P48 1450 aa20.18■□□□□ 0.82
NPTN-IT1-201ENST00000628401 ABCA10Q8WWZ4 1543 aa20.16■□□□□ 0.82
NPTN-IT1-201ENST00000628401 NEUROD1Q13562 356 aa20.12■□□□□ 0.81
NPTN-IT1-201ENST00000628401 ARHGAP35Q9NRY4 1499 aa20.09■□□□□ 0.81
NPTN-IT1-201ENST00000628401 GTF3C3Q9Y5Q9 886 aa20.09■□□□□ 0.81
NPTN-IT1-201ENST00000628401 DIEXFQ68CQ4 756 aaKnown RBP20.07■□□□□ 0.8
NPTN-IT1-201ENST00000628401 TDRD9Q8NDG6 1382 aaKnown RBP20.06■□□□□ 0.8
NPTN-IT1-201ENST00000628401 WDR97A6NE52 1622 aa20.05■□□□□ 0.8
NPTN-IT1-201ENST00000628401 HNRNPUL2Q1KMD3 747 aaKnown RBP19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms