RNA–Protein interactions for RNA: ENST00000628124.2

GABRB3-216, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2 BASIC

Gene GABRB3, Length 5,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-216ENST00000628124 RPUSD2Q8IZ73 545 aaKnown RBP10.25□□□□□ -0.77
GABRB3-216ENST00000628124 CABP5Q9NP86 173 aa10.25□□□□□ -0.77
GABRB3-216ENST00000628124 ODF2LQ9ULJ1 636 aa10.25□□□□□ -0.77
GABRB3-216ENST00000628124 WDR66Q8TBY9 1149 aa10.25□□□□□ -0.77
GABRB3-216ENST00000628124 PRPF31Q8WWY3 499 aaKnown RBP10.25□□□□□ -0.77
GABRB3-216ENST00000628124 SERPINA10Q9UK55 444 aa10.25□□□□□ -0.77
GABRB3-216ENST00000628124 SLC5A1P13866 664 aa10.24□□□□□ -0.77
GABRB3-216ENST00000628124 PRDM11Q9NQV5 511 aa10.24□□□□□ -0.77
GABRB3-216ENST00000628124 BTBD11A6QL63 1104 aa10.24□□□□□ -0.77
GABRB3-216ENST00000628124 MCM5P33992 734 aa10.24□□□□□ -0.77
GABRB3-216ENST00000628124 PAXIP1Q6ZW49 1069 aaPredicted RBP10.24□□□□□ -0.77
GABRB3-216ENST00000628124 ZNF354CQ86Y25 554 aa10.24□□□□□ -0.77
GABRB3-216ENST00000628124 ZNF710Q8N1W2 664 aa10.24□□□□□ -0.77
GABRB3-216ENST00000628124 OTUD6BQ8N6M0 293 aa10.24□□□□□ -0.77
GABRB3-216ENST00000628124 SYCE3A1L190 88 aa10.24□□□□□ -0.77
GABRB3-216ENST00000628124 LIG1P18858 919 aa10.24□□□□□ -0.77
GABRB3-216ENST00000628124 KIF3CO14782 793 aa10.24□□□□□ -0.77
GABRB3-216ENST00000628124 OPA1O60313 960 aa10.24□□□□□ -0.77
GABRB3-216ENST00000628124 BMP15O95972 392 aa10.24□□□□□ -0.77
GABRB3-216ENST00000628124 UBA7P41226 1012 aa10.24□□□□□ -0.77
GABRB3-216ENST00000628124 CAMK4Q16566 473 aa10.24□□□□□ -0.77
GABRB3-216ENST00000628124 STX1AQ16623 288 aa10.24□□□□□ -0.77
GABRB3-216ENST00000628124 APBB1IPQ7Z5R6 666 aaPredicted RBP10.24□□□□□ -0.77
GABRB3-216ENST00000628124 GPATCH11Q8N954 259 aa10.24□□□□□ -0.77
GABRB3-216ENST00000628124 MSANTD4Q8NCY6 345 aa10.24□□□□□ -0.77
GABRB3-216ENST00000628124 SMC1BQ8NDV3 1235 aa10.24□□□□□ -0.77
GABRB3-216ENST00000628124 JADE2Q9NQC1 790 aa10.24□□□□□ -0.77
GABRB3-216ENST00000628124 STIM2Q9P246 746 aa10.24□□□□□ -0.77
GABRB3-216ENST00000628124 IDEP14735 1019 aa10.23□□□□□ -0.77
GABRB3-216ENST00000628124 CYLC1P35663 651 aaPredicted RBP10.23□□□□□ -0.77
GABRB3-216ENST00000628124 TUBB4BP68371 445 aa10.23□□□□□ -0.77
GABRB3-216ENST00000628124 ZBTB16Q05516 673 aa10.23□□□□□ -0.77
GABRB3-216ENST00000628124 TXNDC2Q86VQ3 553 aa10.23□□□□□ -0.77
GABRB3-216ENST00000628124 THEMISQ8N1K5 641 aaPredicted RBP10.23□□□□□ -0.77
GABRB3-216ENST00000628124 LMBR1Q8WVP7 490 aa10.23□□□□□ -0.77
GABRB3-216ENST00000628124 FAM114A2Q9NRY5 505 aa10.23□□□□□ -0.77
GABRB3-216ENST00000628124 GOLGA8AA7E2F4 631 aa10.23□□□□□ -0.77
GABRB3-216ENST00000628124 GOLGA8BA8MQT2 603 aa10.23□□□□□ -0.77
GABRB3-216ENST00000628124 ZNF213O14771 459 aa10.23□□□□□ -0.77
GABRB3-216ENST00000628124 RANBP6O60518 1105 aaKnown RBP10.23□□□□□ -0.77
GABRB3-216ENST00000628124 MYCNP04198 464 aaPredicted RBP10.23□□□□□ -0.77
GABRB3-216ENST00000628124 GTF2F1P35269 517 aaKnown RBP eCLIP10.23□□□□□ -0.77
GABRB3-216ENST00000628124 CCDC117Q8IWD4 279 aaPredicted RBP10.23□□□□□ -0.77
GABRB3-216ENST00000628124 BICD1Q96G01 975 aa10.23□□□□□ -0.77
GABRB3-216ENST00000628124 PPP1R9BQ96SB3 815 aa10.23□□□□□ -0.77
GABRB3-216ENST00000628124 AKR1B10O60218 316 aa10.23□□□□□ -0.77
GABRB3-216ENST00000628124 SH3BP5O60239 455 aa10.23□□□□□ -0.77
GABRB3-216ENST00000628124 ATP2A2P16615 1042 aaKnown RBP10.23□□□□□ -0.77
GABRB3-216ENST00000628124 SPTY2D1Q68D10 685 aaPredicted RBP10.23□□□□□ -0.77
GABRB3-216ENST00000628124 MSL1Q68DK7 614 aa10.23□□□□□ -0.77
GABRB3-216ENST00000628124 IMPG2Q9BZV3 1241 aa10.23□□□□□ -0.77
GABRB3-216ENST00000628124 B4DLN1 442 aa10.23□□□□□ -0.77
GABRB3-216ENST00000628124 KRT13P13646 458 aa10.23□□□□□ -0.77
GABRB3-216ENST00000628124 MRPL12P52815 198 aaKnown RBP10.23□□□□□ -0.77
GABRB3-216ENST00000628124 CCDC82Q8N4S0 544 aa10.23□□□□□ -0.77
GABRB3-216ENST00000628124 PPP2R1AP30153 589 aa10.23□□□□□ -0.77
GABRB3-216ENST00000628124 SPAG1Q07617 926 aa10.23□□□□□ -0.77
GABRB3-216ENST00000628124 CTAGE1Q96RT6 745 aa10.23□□□□□ -0.77
GABRB3-216ENST00000628124 ANKIB1Q9P2G1 1089 aa10.23□□□□□ -0.77
GABRB3-216ENST00000628124 TUBB4AP04350 444 aa10.22□□□□□ -0.77
GABRB3-216ENST00000628124 HLA-DOAP06340 250 aa10.22□□□□□ -0.77
GABRB3-216ENST00000628124 CYB5RLQ6IPT4 315 aa10.22□□□□□ -0.77
GABRB3-216ENST00000628124 CPLX3Q8WVH0 158 aa10.22□□□□□ -0.77
GABRB3-216ENST00000628124 SPAG5Q96R06 1193 aa10.22□□□□□ -0.77
GABRB3-216ENST00000628124 TXNDC16Q9P2K2 825 aa10.22□□□□□ -0.77
GABRB3-216ENST00000628124 PAXBP1Q9Y5B6 917 aa10.22□□□□□ -0.77
GABRB3-216ENST00000628124 ANKRD30BQ9BXX2 1392 aa10.22□□□□□ -0.77
GABRB3-216ENST00000628124 NBPF7P0C2Y1 421 aaPredicted RBP10.22□□□□□ -0.77
GABRB3-216ENST00000628124 SNW1Q13573 536 aaKnown RBP10.22□□□□□ -0.77
GABRB3-216ENST00000628124 CFAP58Q5T655 872 aa10.22□□□□□ -0.77
GABRB3-216ENST00000628124 ARID4AP29374 1257 aaPredicted RBP10.22□□□□□ -0.77
GABRB3-216ENST00000628124 NCBP1Q09161 790 aaKnown RBP10.22□□□□□ -0.77
GABRB3-216ENST00000628124 BICDL1Q6ZP65 573 aa10.22□□□□□ -0.77
GABRB3-216ENST00000628124 JAKMIP2Q96AA8 810 aa10.22□□□□□ -0.77
GABRB3-216ENST00000628124 SAMM50Q9Y512 469 aa10.22□□□□□ -0.77
GABRB3-216ENST00000628124 IFIT3O14879 490 aaKnown RBP10.21□□□□□ -0.77
GABRB3-216ENST00000628124 BAG3O95817 575 aa10.21□□□□□ -0.77
GABRB3-216ENST00000628124 ZFYP08048 801 aaPredicted RBP10.21□□□□□ -0.77
GABRB3-216ENST00000628124 PDE4BQ07343 736 aa10.21□□□□□ -0.77
GABRB3-216ENST00000628124 TTF1Q15361 905 aaPredicted RBP10.21□□□□□ -0.77
GABRB3-216ENST00000628124 CCDC63Q8NA47 563 aa10.21□□□□□ -0.77
GABRB3-216ENST00000628124 NUTM2BA6NNL0 878 aaPredicted RBP10.21□□□□□ -0.77
GABRB3-216ENST00000628124 NUTM2EB1AL46 878 aaPredicted RBP10.21□□□□□ -0.77
GABRB3-216ENST00000628124 CBX1P83916 185 aa10.21□□□□□ -0.77
GABRB3-216ENST00000628124 FERMT3Q86UX7 667 aa10.21□□□□□ -0.77
GABRB3-216ENST00000628124 NUTM2AQ8IVF1 878 aaPredicted RBP10.21□□□□□ -0.77
GABRB3-216ENST00000628124 CCDC144CPQ8IYA2 1237 aa10.21□□□□□ -0.77
GABRB3-216ENST00000628124 MYO1BO43795 1136 aa10.21□□□□□ -0.78
GABRB3-216ENST00000628124 KIF5AQ12840 1032 aa10.21□□□□□ -0.78
GABRB3-216ENST00000628124 PHACTR2O75167 634 aa10.21□□□□□ -0.78
GABRB3-216ENST00000628124 MX1P20591 662 aa10.21□□□□□ -0.78
GABRB3-216ENST00000628124 FMNL3Q8IVF7 1028 aa10.21□□□□□ -0.78
GABRB3-216ENST00000628124 ARFGAP2Q8N6H7 521 aa10.21□□□□□ -0.78
GABRB3-216ENST00000628124 FSIP1Q8NA03 581 aa10.21□□□□□ -0.78
GABRB3-216ENST00000628124 PPFIBP2Q8ND30 876 aa10.21□□□□□ -0.78
GABRB3-216ENST00000628124 IL1RAPL2Q9NP60 686 aa10.21□□□□□ -0.78
GABRB3-216ENST00000628124 EXOC1Q9NV70 894 aa10.21□□□□□ -0.78
GABRB3-216ENST00000628124 USP25Q9UHP3 1055 aa10.21□□□□□ -0.78
GABRB3-216ENST00000628124 TACC1O75410 805 aa10.2□□□□□ -0.78
GABRB3-216ENST00000628124 BCAR3O75815 825 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms