RNA–Protein interactions for RNA: ENST00000627002.1

PTP4A1-206, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5 BASIC

Gene PTP4A1, Length 447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-206ENST00000627002 COPS6Q7L5N1 327 aa9.46□□□□□ -0.9
PTP4A1-206ENST00000627002 LRP10Q7Z4F1 713 aa9.46□□□□□ -0.9
PTP4A1-206ENST00000627002 RIC3Q7Z5B4 369 aa9.46□□□□□ -0.9
PTP4A1-206ENST00000627002 RPAP2Q8IXW5 612 aaPredicted RBP9.46□□□□□ -0.9
PTP4A1-206ENST00000627002 XAGE3Q8WTP9 111 aa9.46□□□□□ -0.9
PTP4A1-206ENST00000627002 ACSBG1Q96GR2 724 aa9.46□□□□□ -0.9
PTP4A1-206ENST00000627002 MEIS3Q99687 375 aa9.46□□□□□ -0.9
PTP4A1-206ENST00000627002 HDAC5Q9UQL6 1122 aa9.46□□□□□ -0.9
PTP4A1-206ENST00000627002 DOT1LQ8TEK3 1739 aa9.45□□□□□ -0.9
PTP4A1-206ENST00000627002 CACNA1FO60840 1977 aa9.45□□□□□ -0.9
PTP4A1-206ENST00000627002 ANKRD13DQ6ZTN6 518 aa9.45□□□□□ -0.9
PTP4A1-206ENST00000627002 DNAJC10Q8IXB1 793 aa9.45□□□□□ -0.9
PTP4A1-206ENST00000627002 SEPT12Q8IYM1 358 aa9.45□□□□□ -0.9
PTP4A1-206ENST00000627002 ANKRD44Q8N8A2 993 aa9.45□□□□□ -0.9
PTP4A1-206ENST00000627002 LINS1Q8NG48 757 aa9.45□□□□□ -0.9
PTP4A1-206ENST00000627002 PLBD2Q8NHP8 589 aa9.45□□□□□ -0.9
PTP4A1-206ENST00000627002 NBPF26B4DH59 902 aa9.44□□□□□ -0.9
PTP4A1-206ENST00000627002 HMMRO75330 724 aa9.44□□□□□ -0.9
PTP4A1-206ENST00000627002 A1BGP04217 495 aa9.44□□□□□ -0.9
PTP4A1-206ENST00000627002 UBTFL1P0CB47 393 aaPredicted RBP9.44□□□□□ -0.9
PTP4A1-206ENST00000627002 NBPF14Q5TI25 921 aa9.44□□□□□ -0.9
PTP4A1-206ENST00000627002 NBPF10Q6P3W6 841 aaKnown RBP9.44□□□□□ -0.9
PTP4A1-206ENST00000627002 NBPF15Q8N660 670 aa9.44□□□□□ -0.9
PTP4A1-206ENST00000627002 GCC1Q96CN9 775 aa9.44□□□□□ -0.9
PTP4A1-206ENST00000627002 METTL22Q9BUU2 404 aaPredicted RBP9.44□□□□□ -0.9
PTP4A1-206ENST00000627002 C1orf115Q9H7X2 142 aa9.44□□□□□ -0.9
PTP4A1-206ENST00000627002 PALLDQ8WX93 1383 aa9.44□□□□□ -0.9
PTP4A1-206ENST00000627002 LOC102724428A0A0B4J2F2 783 aa9.43□□□□□ -0.9
PTP4A1-206ENST00000627002 CYP19A1P11511 503 aaPredicted RBP9.43□□□□□ -0.9
PTP4A1-206ENST00000627002 SIK1P57059 783 aa9.43□□□□□ -0.9
PTP4A1-206ENST00000627002 CEP85Q6P2H3 762 aa9.43□□□□□ -0.9
PTP4A1-206ENST00000627002 DEFB132Q7Z7B7 95 aa9.43□□□□□ -0.9
PTP4A1-206ENST00000627002 SMC5Q8IY18 1101 aa9.43□□□□□ -0.9
PTP4A1-206ENST00000627002 USP44Q9H0E7 712 aa9.43□□□□□ -0.9
PTP4A1-206ENST00000627002 ITGB4P16144 1822 aa9.42□□□□□ -0.9
PTP4A1-206ENST00000627002 N4BP2Q86UW6 1770 aaPredicted RBP9.42□□□□□ -0.9
PTP4A1-206ENST00000627002 KCNQ2O43526 872 aa9.42□□□□□ -0.9
PTP4A1-206ENST00000627002 ATP6V1AP38606 617 aa9.42□□□□□ -0.9
PTP4A1-206ENST00000627002 PIP4K2AP48426 406 aaPredicted RBP9.42□□□□□ -0.9
PTP4A1-206ENST00000627002 KIF6Q6ZMV9 814 aa9.42□□□□□ -0.9
PTP4A1-206ENST00000627002 SIRT2Q8IXJ6 389 aa9.42□□□□□ -0.9
PTP4A1-206ENST00000627002 SLC4A9Q96Q91 983 aa9.42□□□□□ -0.9
PTP4A1-206ENST00000627002 C9orf78Q9NZ63 289 aaPredicted RBP9.42□□□□□ -0.9
PTP4A1-206ENST00000627002 UTYO14607 1347 aa9.41□□□□□ -0.9
PTP4A1-206ENST00000627002 NEURL1BA8MQ27 555 aa9.41□□□□□ -0.9
PTP4A1-206ENST00000627002 GRM8O00222 908 aa9.41□□□□□ -0.9
PTP4A1-206ENST00000627002 IL6STP40189 918 aaPredicted RBP9.41□□□□□ -0.9
PTP4A1-206ENST00000627002 BAG6P46379 1132 aa9.41□□□□□ -0.9
PTP4A1-206ENST00000627002 NPM2Q86SE8 214 aaKnown RBP9.41□□□□□ -0.9
PTP4A1-206ENST00000627002 SPDYE1Q8NFV5 336 aaPredicted RBP9.41□□□□□ -0.9
PTP4A1-206ENST00000627002 MYD88Q99836 296 aa9.41□□□□□ -0.9
PTP4A1-206ENST00000627002 PDZRN3Q9UPQ7 1066 aa9.41□□□□□ -0.9
PTP4A1-206ENST00000627002 CLEC11AQ9Y240 323 aa9.41□□□□□ -0.9
PTP4A1-206ENST00000627002 LRRFIP2Q9Y608 721 aaKnown RBP9.41□□□□□ -0.9
PTP4A1-206ENST00000627002 SRCAPQ6ZRS2 3230 aa9.41□□□□□ -0.9
PTP4A1-206ENST00000627002 IGKV5-2P06315 115 aa9.4□□□□□ -0.9
PTP4A1-206ENST00000627002 ATP8B2P98198 1209 aa9.4□□□□□ -0.9
PTP4A1-206ENST00000627002 NUCB1Q02818 461 aa9.4□□□□□ -0.9
PTP4A1-206ENST00000627002 GCKRQ14397 625 aa9.4□□□□□ -0.9
PTP4A1-206ENST00000627002 CWF19L2Q2TBE0 894 aaKnown RBP9.4□□□□□ -0.9
PTP4A1-206ENST00000627002 FAM196AQ6ZSG2 479 aa9.4□□□□□ -0.9
PTP4A1-206ENST00000627002 TTLL7Q6ZT98 887 aa9.4□□□□□ -0.9
PTP4A1-206ENST00000627002 KRT27Q7Z3Y8 459 aa9.4□□□□□ -0.9
PTP4A1-206ENST00000627002 DCTPP1Q9H773 170 aa9.4□□□□□ -0.9
PTP4A1-206ENST00000627002 CCDC87Q9NVE4 849 aa9.4□□□□□ -0.9
PTP4A1-206ENST00000627002 CICQ96RK0 1608 aaPredicted RBP9.4□□□□□ -0.9
PTP4A1-206ENST00000627002 NHSQ6T4R5 1651 aa9.39□□□□□ -0.91
PTP4A1-206ENST00000627002 MAP3K15Q6ZN16 1313 aa9.39□□□□□ -0.91
PTP4A1-206ENST00000627002 NBPF7P0C2Y1 421 aaPredicted RBP9.39□□□□□ -0.91
PTP4A1-206ENST00000627002 CRKLP46109 303 aaKnown RBP9.39□□□□□ -0.91
PTP4A1-206ENST00000627002 HSP90AB3PQ58FF7 597 aa9.39□□□□□ -0.91
PTP4A1-206ENST00000627002 BCL11BQ9C0K0 894 aaPredicted RBP9.39□□□□□ -0.91
PTP4A1-206ENST00000627002 ZBTB47Q9UFB7 747 aaPredicted RBP9.39□□□□□ -0.91
PTP4A1-206ENST00000627002 ZBTB1Q9Y2K1 713 aa9.39□□□□□ -0.91
PTP4A1-206ENST00000627002 ZNF330Q9Y3S2 320 aaPredicted RBP9.39□□□□□ -0.91
PTP4A1-206ENST00000627002 ZNF831Q5JPB2 1677 aa9.39□□□□□ -0.91
PTP4A1-206ENST00000627002 COL15A1P39059 1388 aa9.38□□□□□ -0.91
PTP4A1-206ENST00000627002 ERVV-1B6SEH8 477 aa9.38□□□□□ -0.91
PTP4A1-206ENST00000627002 HMGB2P26583 209 aaKnown RBP9.38□□□□□ -0.91
PTP4A1-206ENST00000627002 RGS3P49796 1198 aa9.38□□□□□ -0.91
PTP4A1-206ENST00000627002 TRIM28Q13263 835 aaKnown RBP9.38□□□□□ -0.91
PTP4A1-206ENST00000627002 MTX1Q13505 466 aa9.38□□□□□ -0.91
PTP4A1-206ENST00000627002 ITPK1Q13572 414 aa9.38□□□□□ -0.91
PTP4A1-206ENST00000627002 INTS5Q6P9B9 1019 aaKnown RBP9.38□□□□□ -0.91
PTP4A1-206ENST00000627002 CHD1LQ86WJ1 897 aa9.38□□□□□ -0.91
PTP4A1-206ENST00000627002 CCDC191Q8NCU4 936 aa9.38□□□□□ -0.91
PTP4A1-206ENST00000627002 ZBTB3Q9H5J0 574 aa9.38□□□□□ -0.91
PTP4A1-206ENST00000627002 CWC25Q9NXE8 425 aaPredicted RBP9.38□□□□□ -0.91
PTP4A1-206ENST00000627002 TJP1Q07157 1748 aa9.38□□□□□ -0.91
PTP4A1-206ENST00000627002 CNTNAP4Q9C0A0 1308 aa9.37□□□□□ -0.91
PTP4A1-206ENST00000627002 A0A087WZG4 1122 aa9.37□□□□□ -0.91
PTP4A1-206ENST00000627002 PSDA5PKW4 1024 aaPredicted RBP9.37□□□□□ -0.91
PTP4A1-206ENST00000627002 EIF5P55010 431 aaKnown RBP9.37□□□□□ -0.91
PTP4A1-206ENST00000627002 TCIRG1Q13488 830 aa9.37□□□□□ -0.91
PTP4A1-206ENST00000627002 FAM182BQ5T319 152 aa9.37□□□□□ -0.91
PTP4A1-206ENST00000627002 RC3H1Q5TC82 1133 aaKnown RBP9.37□□□□□ -0.91
PTP4A1-206ENST00000627002 ANKRD45Q5TZF3 282 aa9.37□□□□□ -0.91
PTP4A1-206ENST00000627002 GIGYF2Q6Y7W6 1299 aaKnown RBP9.37□□□□□ -0.91
PTP4A1-206ENST00000627002 DZIP3Q86Y13 1208 aaKnown RBP9.37□□□□□ -0.91
PTP4A1-206ENST00000627002 SSH3Q8TE77 659 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms