RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 ATP10DQ9P241 1426 aa18.06■□□□□ 0.48
SNRPA1-216ENST00000626000 NPHP1O15259 732 aa18.06■□□□□ 0.48
SNRPA1-216ENST00000626000 SERPINB2P05120 415 aa18.06■□□□□ 0.48
SNRPA1-216ENST00000626000 PDIA6Q15084 440 aa18.06■□□□□ 0.48
SNRPA1-216ENST00000626000 FANCIQ9NVI1 1328 aa18.05■□□□□ 0.48
SNRPA1-216ENST00000626000 TBC1D9BQ66K14 1250 aa18.05■□□□□ 0.48
SNRPA1-216ENST00000626000 MIER1Q8N108 512 aa18.05■□□□□ 0.48
SNRPA1-216ENST00000626000 STK31Q9BXU1 1019 aa18.05■□□□□ 0.48
SNRPA1-216ENST00000626000 SALL2Q9Y467 1007 aaPredicted RBP18.05■□□□□ 0.48
SNRPA1-216ENST00000626000 AFDNP55196 1824 aaKnown RBP18.05■□□□□ 0.48
SNRPA1-216ENST00000626000 IBTKQ9P2D0 1353 aaPredicted RBP18.04■□□□□ 0.48
SNRPA1-216ENST00000626000 ST5P78524 1137 aa18.04■□□□□ 0.48
SNRPA1-216ENST00000626000 KRT24Q2M2I5 525 aa18.04■□□□□ 0.48
SNRPA1-216ENST00000626000 GIGYF2Q6Y7W6 1299 aaKnown RBP18.04■□□□□ 0.48
SNRPA1-216ENST00000626000 CNBD1Q8NA66 436 aa18.04■□□□□ 0.48
SNRPA1-216ENST00000626000 NYXQ9GZU5 481 aa18.04■□□□□ 0.48
SNRPA1-216ENST00000626000 CHPF2Q9P2E5 772 aa18.04■□□□□ 0.48
SNRPA1-216ENST00000626000 NIP7Q9Y221 180 aaKnown RBP eCLIP18.04■□□□□ 0.48
SNRPA1-216ENST00000626000 ZNF521Q96K83 1311 aa18.03■□□□□ 0.48
SNRPA1-216ENST00000626000 NUP98P52948 1817 aa18.03■□□□□ 0.48
SNRPA1-216ENST00000626000 CACNA1FO60840 1977 aa18.03■□□□□ 0.48
SNRPA1-216ENST00000626000 GRIN3BO60391 1043 aa18.03■□□□□ 0.48
SNRPA1-216ENST00000626000 TWISTNBQ3B726 338 aaPredicted RBP18.03■□□□□ 0.48
SNRPA1-216ENST00000626000 PARP10Q53GL7 1025 aa18.03■□□□□ 0.48
SNRPA1-216ENST00000626000 TPTE2Q6XPS3 522 aa18.03■□□□□ 0.48
SNRPA1-216ENST00000626000 BICDL1Q6ZP65 573 aa18.03■□□□□ 0.48
SNRPA1-216ENST00000626000 LRP10Q7Z4F1 713 aa18.03■□□□□ 0.48
SNRPA1-216ENST00000626000 NLGN2Q8NFZ4 835 aa18.03■□□□□ 0.48
SNRPA1-216ENST00000626000 TSR2Q969E8 191 aaKnown RBP18.03■□□□□ 0.48
SNRPA1-216ENST00000626000 RNF123Q5XPI4 1314 aa18.02■□□□□ 0.48
SNRPA1-216ENST00000626000 PXDNLA1KZ92 1463 aa18.02■□□□□ 0.48
SNRPA1-216ENST00000626000 E9PSI1 815 aa18.02■□□□□ 0.48
SNRPA1-216ENST00000626000 DDX58O95786 925 aaKnown RBP18.02■□□□□ 0.48
SNRPA1-216ENST00000626000 PDE6BP35913 854 aa18.02■□□□□ 0.48
SNRPA1-216ENST00000626000 GPR162Q16538 588 aa18.02■□□□□ 0.48
SNRPA1-216ENST00000626000 NBPF5PQ86XG9 351 aaPredicted RBP18.02■□□□□ 0.48
SNRPA1-216ENST00000626000 C8orf58Q8NAV2 365 aa18.02■□□□□ 0.48
SNRPA1-216ENST00000626000 TTLL7Q6ZT98 887 aa18.01■□□□□ 0.47
SNRPA1-216ENST00000626000 COPS6Q7L5N1 327 aa18.01■□□□□ 0.47
SNRPA1-216ENST00000626000 PLBD2Q8NHP8 589 aa18.01■□□□□ 0.47
SNRPA1-216ENST00000626000 XAGE3Q8WTP9 111 aa18.01■□□□□ 0.47
SNRPA1-216ENST00000626000 NECTIN2Q92692 538 aa18.01■□□□□ 0.47
SNRPA1-216ENST00000626000 BRIP1Q9BX63 1249 aa18.01■□□□□ 0.47
SNRPA1-216ENST00000626000 ZBTB3Q9H5J0 574 aa18.01■□□□□ 0.47
SNRPA1-216ENST00000626000 ELL2O00472 640 aaPredicted RBP18■□□□□ 0.47
SNRPA1-216ENST00000626000 PROSER3Q2NL68 480 aa18■□□□□ 0.47
SNRPA1-216ENST00000626000 ANKRD36CQ5JPF3 1778 aa17.99■□□□□ 0.47
SNRPA1-216ENST00000626000 KIAA1551Q9HCM1 1747 aa17.99■□□□□ 0.47
SNRPA1-216ENST00000626000 GTF2E1P29083 439 aaPredicted RBP17.99■□□□□ 0.47
SNRPA1-216ENST00000626000 HLFQ16534 295 aa17.99■□□□□ 0.47
SNRPA1-216ENST00000626000 PRR5LQ6MZQ0 368 aa17.99■□□□□ 0.47
SNRPA1-216ENST00000626000 ANKRD13DQ6ZTN6 518 aa17.99■□□□□ 0.47
SNRPA1-216ENST00000626000 PPP1R42Q7Z4L9 355 aa17.99■□□□□ 0.47
SNRPA1-216ENST00000626000 PIM2Q9P1W9 311 aa17.99■□□□□ 0.47
SNRPA1-216ENST00000626000 H0YIN7 160 aa17.98■□□□□ 0.47
SNRPA1-216ENST00000626000 AIMP1Q12904 312 aaKnown RBP17.98■□□□□ 0.47
SNRPA1-216ENST00000626000 ZNF428Q96B54 188 aa17.98■□□□□ 0.47
SNRPA1-216ENST00000626000 RIC1Q4ADV7 1423 aa17.98■□□□□ 0.47
SNRPA1-216ENST00000626000 DLEC1Q9Y238 1755 aa17.97■□□□□ 0.47
SNRPA1-216ENST00000626000 SENP3-EIF4A1A0A087X0R7 540 aa17.97■□□□□ 0.47
SNRPA1-216ENST00000626000 ANXA1P04083 346 aa17.97■□□□□ 0.47
SNRPA1-216ENST00000626000 ZNF34Q8IZ26 560 aa17.97■□□□□ 0.47
SNRPA1-216ENST00000626000 PELP1Q8IZL8 1130 aaKnown RBP17.97■□□□□ 0.47
SNRPA1-216ENST00000626000 TSPYL6Q8N831 410 aa17.97■□□□□ 0.47
SNRPA1-216ENST00000626000 BRCA1P38398 1863 aaKnown RBP17.97■□□□□ 0.47
SNRPA1-216ENST00000626000 DPEP1P16444 411 aa17.96■□□□□ 0.47
SNRPA1-216ENST00000626000 EXOSC9Q06265 439 aaKnown RBP17.96■□□□□ 0.47
SNRPA1-216ENST00000626000 TCIRG1Q13488 830 aa17.96■□□□□ 0.47
SNRPA1-216ENST00000626000 N4BP2Q86UW6 1770 aaPredicted RBP17.96■□□□□ 0.47
SNRPA1-216ENST00000626000 A0A0G2JLW4 131 aa17.95■□□□□ 0.46
SNRPA1-216ENST00000626000 CT47B1P0C2W7 299 aaPredicted RBP17.95■□□□□ 0.46
SNRPA1-216ENST00000626000 HSP90B1P14625 803 aaKnown RBP17.95■□□□□ 0.46
SNRPA1-216ENST00000626000 DALRD3Q5D0E6 543 aaKnown RBP17.95■□□□□ 0.46
SNRPA1-216ENST00000626000 RIC3Q7Z5B4 369 aa17.95■□□□□ 0.46
SNRPA1-216ENST00000626000 ARFGEF1Q9Y6D6 1849 aa17.94■□□□□ 0.46
SNRPA1-216ENST00000626000 VAMP4O75379 141 aa17.94■□□□□ 0.46
SNRPA1-216ENST00000626000 C2CD5Q86YS7 1000 aa17.94■□□□□ 0.46
SNRPA1-216ENST00000626000 ARFGEF2Q9Y6D5 1785 aa17.94■□□□□ 0.46
SNRPA1-216ENST00000626000 CHD4Q14839 1912 aa17.94■□□□□ 0.46
SNRPA1-216ENST00000626000 ANKRD31Q8N7Z5 1873 aa17.93■□□□□ 0.46
SNRPA1-216ENST00000626000 GPTP24298 496 aa17.93■□□□□ 0.46
SNRPA1-216ENST00000626000 SLFN5Q08AF3 891 aa17.93■□□□□ 0.46
SNRPA1-216ENST00000626000 TRIM28Q13263 835 aaKnown RBP17.93■□□□□ 0.46
SNRPA1-216ENST00000626000 STYK1Q6J9G0 422 aa17.93■□□□□ 0.46
SNRPA1-216ENST00000626000 UTP14AQ9BVJ6 771 aaKnown RBP17.93■□□□□ 0.46
SNRPA1-216ENST00000626000 SLC4A2P04920 1241 aa17.92■□□□□ 0.46
SNRPA1-216ENST00000626000 NEXNQ0ZGT2 675 aa17.92■□□□□ 0.46
SNRPA1-216ENST00000626000 TTLL6Q8N841 843 aa17.92■□□□□ 0.46
SNRPA1-216ENST00000626000 CNKSR1Q969H4 720 aa17.92■□□□□ 0.46
SNRPA1-216ENST00000626000 SPINK5Q9NQ38 1064 aaPredicted RBP17.92■□□□□ 0.46
SNRPA1-216ENST00000626000 UBN2Q6ZU65 1347 aa17.92■□□□□ 0.46
SNRPA1-216ENST00000626000 KLRG2A4D1S0 409 aaPredicted RBP17.91■□□□□ 0.46
SNRPA1-216ENST00000626000 YBX3P16989 372 aaKnown RBP eCLIP17.91■□□□□ 0.46
SNRPA1-216ENST00000626000 KSR2Q6VAB6 950 aa17.91■□□□□ 0.46
SNRPA1-216ENST00000626000 NLRP10Q86W26 655 aa17.91■□□□□ 0.46
SNRPA1-216ENST00000626000 MASTLQ96GX5 879 aa17.91■□□□□ 0.46
SNRPA1-216ENST00000626000 BCS1LQ9Y276 419 aa17.91■□□□□ 0.46
SNRPA1-216ENST00000626000 NTSR2O95665 410 aa17.9■□□□□ 0.46
SNRPA1-216ENST00000626000 SRGNP10124 158 aa17.9■□□□□ 0.46
SNRPA1-216ENST00000626000 NPR1P16066 1061 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms