RNA–Protein interactions for RNA: ENST00000622493.4

CLTCL1-212, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2 BASIC

Gene CLTCL1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-212ENST00000622493 LY75O60449 1722 aa17.87■□□□□ 0.45
CLTCL1-212ENST00000622493 COL5A3P25940 1745 aaPredicted RBP17.87■□□□□ 0.45
CLTCL1-212ENST00000622493 RREB1Q92766 1687 aa17.87■□□□□ 0.45
CLTCL1-212ENST00000622493 CRKLP46109 303 aaKnown RBP17.86■□□□□ 0.45
CLTCL1-212ENST00000622493 RPAP2Q8IXW5 612 aaPredicted RBP17.86■□□□□ 0.45
CLTCL1-212ENST00000622493 HDAC5Q9UQL6 1122 aa17.86■□□□□ 0.45
CLTCL1-212ENST00000622493 ARFGEF2Q9Y6D5 1785 aa17.86■□□□□ 0.45
CLTCL1-212ENST00000622493 IGHDP01880 384 aa17.86■□□□□ 0.45
CLTCL1-212ENST00000622493 HMGB2P26583 209 aaKnown RBP17.86■□□□□ 0.45
CLTCL1-212ENST00000622493 INTS5Q6P9B9 1019 aaKnown RBP17.86■□□□□ 0.45
CLTCL1-212ENST00000622493 TTLL7Q6ZT98 887 aa17.86■□□□□ 0.45
CLTCL1-212ENST00000622493 GNAI2P04899 355 aa17.85■□□□□ 0.45
CLTCL1-212ENST00000622493 KIF6Q6ZMV9 814 aa17.85■□□□□ 0.45
CLTCL1-212ENST00000622493 UBTFL1P0CB47 393 aaPredicted RBP17.84■□□□□ 0.45
CLTCL1-212ENST00000622493 EIF5P55010 431 aaKnown RBP17.84■□□□□ 0.45
CLTCL1-212ENST00000622493 NUP188Q5SRE5 1749 aa17.84■□□□□ 0.45
CLTCL1-212ENST00000622493 RC3H1Q5TC82 1133 aaKnown RBP17.84■□□□□ 0.45
CLTCL1-212ENST00000622493 TSHZ2Q9NRE2 1034 aa17.84■□□□□ 0.45
CLTCL1-212ENST00000622493 CCNL1Q9UK58 526 aaPredicted RBP17.84■□□□□ 0.45
CLTCL1-212ENST00000622493 CNTNAP4Q9C0A0 1308 aa17.84■□□□□ 0.45
CLTCL1-212ENST00000622493 TRIM37O94972 964 aa17.84■□□□□ 0.45
CLTCL1-212ENST00000622493 IGKV5-2P06315 115 aa17.84■□□□□ 0.45
CLTCL1-212ENST00000622493 MYD88Q99836 296 aa17.84■□□□□ 0.45
CLTCL1-212ENST00000622493 C1orf115Q9H7X2 142 aa17.84■□□□□ 0.45
CLTCL1-212ENST00000622493 ZNF330Q9Y3S2 320 aaPredicted RBP17.84■□□□□ 0.45
CLTCL1-212ENST00000622493 NEURL1BA8MQ27 555 aa17.83■□□□□ 0.44
CLTCL1-212ENST00000622493 CWF19L2Q2TBE0 894 aaKnown RBP17.83■□□□□ 0.44
CLTCL1-212ENST00000622493 C9orf78Q9NZ63 289 aaPredicted RBP17.83■□□□□ 0.44
CLTCL1-212ENST00000622493 UTYO14607 1347 aa17.82■□□□□ 0.44
CLTCL1-212ENST00000622493 MAP3K15Q6ZN16 1313 aa17.82■□□□□ 0.44
CLTCL1-212ENST00000622493 ERVV-1B6SEH8 477 aa17.82■□□□□ 0.44
CLTCL1-212ENST00000622493 ANKRD44Q8N8A2 993 aa17.82■□□□□ 0.44
CLTCL1-212ENST00000622493 LINC00116Q8NCU8 138 aa17.82■□□□□ 0.44
CLTCL1-212ENST00000622493 MYH14Q7Z406 1995 aaKnown RBP17.82■□□□□ 0.44
CLTCL1-212ENST00000622493 GRM8O00222 908 aa17.81■□□□□ 0.44
CLTCL1-212ENST00000622493 GCKRQ14397 625 aa17.81■□□□□ 0.44
CLTCL1-212ENST00000622493 SLC27A3Q5K4L6 730 aa17.81■□□□□ 0.44
CLTCL1-212ENST00000622493 CEP85Q6P2H3 762 aa17.81■□□□□ 0.44
CLTCL1-212ENST00000622493 ZBTB3Q9H5J0 574 aa17.81■□□□□ 0.44
CLTCL1-212ENST00000622493 NBPF7P0C2Y1 421 aaPredicted RBP17.81■□□□□ 0.44
CLTCL1-212ENST00000622493 HSP90AB3PQ58FF7 597 aa17.81■□□□□ 0.44
CLTCL1-212ENST00000622493 GIGYF2Q6Y7W6 1299 aaKnown RBP17.81■□□□□ 0.44
CLTCL1-212ENST00000622493 DZIP3Q86Y13 1208 aaKnown RBP17.81■□□□□ 0.44
CLTCL1-212ENST00000622493 TRIM28Q13263 835 aaKnown RBP17.8■□□□□ 0.44
CLTCL1-212ENST00000622493 TCIRG1Q13488 830 aa17.8■□□□□ 0.44
CLTCL1-212ENST00000622493 SIRT2Q8IXJ6 389 aa17.8■□□□□ 0.44
CLTCL1-212ENST00000622493 CCDC191Q8NCU4 936 aa17.8■□□□□ 0.44
CLTCL1-212ENST00000622493 TAF1LQ8IZX4 1826 aa17.79■□□□□ 0.44
CLTCL1-212ENST00000622493 A0A087WZG4 1122 aa17.79■□□□□ 0.44
CLTCL1-212ENST00000622493 HMMRO75330 724 aa17.79■□□□□ 0.44
CLTCL1-212ENST00000622493 AFDNP55196 1824 aaKnown RBP17.78■□□□□ 0.44
CLTCL1-212ENST00000622493 PLSCR1O15162 318 aa17.78■□□□□ 0.44
CLTCL1-212ENST00000622493 SMC5Q8IY18 1101 aa17.78■□□□□ 0.44
CLTCL1-212ENST00000622493 GCC1Q96CN9 775 aa17.78■□□□□ 0.44
CLTCL1-212ENST00000622493 ARXQ96QS3 562 aa17.78■□□□□ 0.44
CLTCL1-212ENST00000622493 LRRFIP2Q9Y608 721 aaKnown RBP17.78■□□□□ 0.44
CLTCL1-212ENST00000622493 RGL2O15211 777 aa17.78■□□□□ 0.44
CLTCL1-212ENST00000622493 ISCA1Q9BUE6 129 aa17.78■□□□□ 0.44
CLTCL1-212ENST00000622493 COL15A1P39059 1388 aa17.77■□□□□ 0.44
CLTCL1-212ENST00000622493 EP400Q96L91 3159 aa17.77■□□□□ 0.44
CLTCL1-212ENST00000622493 ATP5J2-PTCD1G3V325 749 aa17.77■□□□□ 0.44
CLTCL1-212ENST00000622493 RPS6KA4O75676 772 aa17.77■□□□□ 0.44
CLTCL1-212ENST00000622493 KCNQ4P56696 695 aa17.77■□□□□ 0.44
CLTCL1-212ENST00000622493 ATP8B2P98198 1209 aa17.77■□□□□ 0.44
CLTCL1-212ENST00000622493 ANP32EQ9BTT0 268 aa17.77■□□□□ 0.44
CLTCL1-212ENST00000622493 CWC25Q9NXE8 425 aaPredicted RBP17.77■□□□□ 0.44
CLTCL1-212ENST00000622493 TBC1D2BQ9UPU7 963 aa17.77■□□□□ 0.44
CLTCL1-212ENST00000622493 DCTPP1Q9H773 170 aa17.75■□□□□ 0.43
CLTCL1-212ENST00000622493 C4BP0C0L5 1744 aa17.75■□□□□ 0.43
CLTCL1-212ENST00000622493 NUP98P52948 1817 aa17.75■□□□□ 0.43
CLTCL1-212ENST00000622493 H7C1W4 665 aa17.75■□□□□ 0.43
CLTCL1-212ENST00000622493 MTX1Q13505 466 aa17.75■□□□□ 0.43
CLTCL1-212ENST00000622493 LRRC4BQ9NT99 713 aa17.75■□□□□ 0.43
CLTCL1-212ENST00000622493 RTCBQ9Y3I0 505 aaKnown RBP17.75■□□□□ 0.43
CLTCL1-212ENST00000622493 CAMTA2O94983 1202 aa17.74■□□□□ 0.43
CLTCL1-212ENST00000622493 APBA3O96018 575 aa17.74■□□□□ 0.43
CLTCL1-212ENST00000622493 HLFQ16534 295 aa17.74■□□□□ 0.43
CLTCL1-212ENST00000622493 CLEC4GQ6UXB4 293 aa17.74■□□□□ 0.43
CLTCL1-212ENST00000622493 ANKRD36CQ5JPF3 1778 aa17.74■□□□□ 0.43
CLTCL1-212ENST00000622493 GNPATO15228 680 aa17.73■□□□□ 0.43
CLTCL1-212ENST00000622493 TXNRD1Q16881 649 aa17.73■□□□□ 0.43
CLTCL1-212ENST00000622493 ZNF652Q9Y2D9 606 aa17.73■□□□□ 0.43
CLTCL1-212ENST00000622493 UBE3BQ7Z3V4 1068 aa17.72■□□□□ 0.43
CLTCL1-212ENST00000622493 ILDR1Q86SU0 546 aaPredicted RBP17.72■□□□□ 0.43
CLTCL1-212ENST00000622493 SSH3Q8TE77 659 aa17.72■□□□□ 0.43
CLTCL1-212ENST00000622493 SUCLG2Q96I99 432 aa17.72■□□□□ 0.43
CLTCL1-212ENST00000622493 AK7Q96M32 723 aa17.72■□□□□ 0.43
CLTCL1-212ENST00000622493 RGPD3A6NKT7 1758 aaPredicted RBP17.72■□□□□ 0.43
CLTCL1-212ENST00000622493 ADRA2BP18089 450 aa17.72■□□□□ 0.43
CLTCL1-212ENST00000622493 CASP7P55210 303 aa17.72■□□□□ 0.43
CLTCL1-212ENST00000622493 RGPD4Q7Z3J3 1758 aa17.72■□□□□ 0.43
CLTCL1-212ENST00000622493 ZNF34Q8IZ26 560 aa17.72■□□□□ 0.43
CLTCL1-212ENST00000622493 PNMA6EA0A0J9YXQ4 647 aa17.71■□□□□ 0.43
CLTCL1-212ENST00000622493 POLA2Q14181 598 aa17.71■□□□□ 0.43
CLTCL1-212ENST00000622493 PPP1R42Q7Z4L9 355 aa17.71■□□□□ 0.43
CLTCL1-212ENST00000622493 PROM2Q8N271 834 aa17.71■□□□□ 0.43
CLTCL1-212ENST00000622493 ZBTB38Q8NAP3 1195 aaPredicted RBP17.71■□□□□ 0.43
CLTCL1-212ENST00000622493 KAZALD1Q96I82 304 aa17.71■□□□□ 0.43
CLTCL1-212ENST00000622493 BCORQ6W2J9 1755 aa17.71■□□□□ 0.43
CLTCL1-212ENST00000622493 TNS1Q9HBL0 1735 aaKnown RBP17.71■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms