RNA–Protein interactions for RNA: ENST00000621266.4

COL4A6-210, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,627 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-210ENST00000621266 RASSF4Q9H2L5 321 aa11.43□□□□□ -0.58
COL4A6-210ENST00000621266 FKBP15Q5T1M5 1219 aa11.43□□□□□ -0.58
COL4A6-210ENST00000621266 GNG11P61952 73 aa11.43□□□□□ -0.58
COL4A6-210ENST00000621266 CCDC96Q2M329 555 aa11.43□□□□□ -0.58
COL4A6-210ENST00000621266 LARP1Q6PKG0 1096 aaKnown RBP11.43□□□□□ -0.58
COL4A6-210ENST00000621266 NEMFO60524 1076 aa11.43□□□□□ -0.58
COL4A6-210ENST00000621266 HDGFL1Q5TGJ6 251 aa11.43□□□□□ -0.58
COL4A6-210ENST00000621266 MXRA7P84157 204 aa11.42□□□□□ -0.58
COL4A6-210ENST00000621266 PAIP2Q9BPZ3 127 aaKnown RBP11.42□□□□□ -0.58
COL4A6-210ENST00000621266 JADE2Q9NQC1 790 aa11.42□□□□□ -0.58
COL4A6-210ENST00000621266 PDIA4P13667 645 aaKnown RBP11.42□□□□□ -0.58
COL4A6-210ENST00000621266 DRC1Q96MC2 740 aa11.42□□□□□ -0.58
COL4A6-210ENST00000621266 NAA15Q9BXJ9 866 aaKnown RBP11.42□□□□□ -0.58
COL4A6-210ENST00000621266 BMP2KQ9NSY1 1161 aaPredicted RBP11.42□□□□□ -0.58
COL4A6-210ENST00000621266 VPS18Q9P253 973 aa11.42□□□□□ -0.58
COL4A6-210ENST00000621266 URB2Q14146 1524 aaKnown RBP11.42□□□□□ -0.58
COL4A6-210ENST00000621266 GSDMDP57764 484 aa11.42□□□□□ -0.58
COL4A6-210ENST00000621266 NOLC1Q14978 699 aaKnown RBP eCLIP11.42□□□□□ -0.58
COL4A6-210ENST00000621266 TDRD12Q587J7 1177 aaKnown RBP11.42□□□□□ -0.58
COL4A6-210ENST00000621266 WDR63Q8IWG1 891 aa11.42□□□□□ -0.58
COL4A6-210ENST00000621266 C16orf71Q8IYS4 520 aaPredicted RBP11.42□□□□□ -0.58
COL4A6-210ENST00000621266 PRPF4BQ13523 1007 aaKnown RBP11.42□□□□□ -0.58
COL4A6-210ENST00000621266 CHRNA2Q15822 529 aa11.42□□□□□ -0.58
COL4A6-210ENST00000621266 SOGA3Q5TF21 947 aa11.42□□□□□ -0.58
COL4A6-210ENST00000621266 CCDC61Q9Y6R9 512 aa11.42□□□□□ -0.58
COL4A6-210ENST00000621266 MSH6P52701 1360 aa11.42□□□□□ -0.58
COL4A6-210ENST00000621266 BIN1O00499 593 aa11.41□□□□□ -0.58
COL4A6-210ENST00000621266 YEATS4O95619 227 aa11.41□□□□□ -0.58
COL4A6-210ENST00000621266 CETN2P41208 172 aa11.41□□□□□ -0.58
COL4A6-210ENST00000621266 CHMP4BP1P59074 171 aa11.41□□□□□ -0.58
COL4A6-210ENST00000621266 CCDC121Q6ZUS5 278 aa11.41□□□□□ -0.58
COL4A6-210ENST00000621266 HOOK3Q86VS8 718 aa11.41□□□□□ -0.58
COL4A6-210ENST00000621266 ARFGAP3Q9NP61 516 aa11.41□□□□□ -0.58
COL4A6-210ENST00000621266 DENND4BO75064 1496 aaPredicted RBP11.41□□□□□ -0.58
COL4A6-210ENST00000621266 GUCY1B3Q02153 619 aa11.41□□□□□ -0.58
COL4A6-210ENST00000621266 APBB1IPQ7Z5R6 666 aaPredicted RBP11.41□□□□□ -0.58
COL4A6-210ENST00000621266 OTUD6BQ8N6M0 293 aa11.41□□□□□ -0.58
COL4A6-210ENST00000621266 ANKRD18BA2A2Z9 1011 aa11.41□□□□□ -0.58
COL4A6-210ENST00000621266 CDKL5O76039 1030 aa11.41□□□□□ -0.58
COL4A6-210ENST00000621266 ZSCAN23Q3MJ62 389 aa11.41□□□□□ -0.58
COL4A6-210ENST00000621266 CCDC158Q5M9N0 1113 aa11.41□□□□□ -0.58
COL4A6-210ENST00000621266 TBC1D2Q9BYX2 928 aa11.41□□□□□ -0.58
COL4A6-210ENST00000621266 SLC4A2P04920 1241 aa11.41□□□□□ -0.58
COL4A6-210ENST00000621266 PANK2Q9BZ23 570 aa11.41□□□□□ -0.58
COL4A6-210ENST00000621266 MVPQ14764 893 aaKnown RBP11.41□□□□□ -0.58
COL4A6-210ENST00000621266 ISM2Q6H9L7 571 aa11.41□□□□□ -0.58
COL4A6-210ENST00000621266 KRBA2Q6ZNG9 492 aa11.41□□□□□ -0.58
COL4A6-210ENST00000621266 ALS2CR12Q96Q35 445 aa11.41□□□□□ -0.58
COL4A6-210ENST00000621266 HOMER2Q9NSB8 354 aa11.41□□□□□ -0.58
COL4A6-210ENST00000621266 RSRC1Q96IZ7 334 aaKnown RBP11.4□□□□□ -0.58
COL4A6-210ENST00000621266 KIF21AQ7Z4S6 1674 aa11.4□□□□□ -0.58
COL4A6-210ENST00000621266 FANCAO15360 1455 aa11.4□□□□□ -0.58
COL4A6-210ENST00000621266 ABCC5O15440 1437 aa11.4□□□□□ -0.58
COL4A6-210ENST00000621266 ZNF622Q969S3 477 aaKnown RBP eCLIP11.4□□□□□ -0.58
COL4A6-210ENST00000621266 MPHOSPH8Q99549 860 aa11.4□□□□□ -0.58
COL4A6-210ENST00000621266 TAOK3Q9H2K8 898 aa11.4□□□□□ -0.58
COL4A6-210ENST00000621266 A0A1W2PRG0 241 aa11.4□□□□□ -0.59
COL4A6-210ENST00000621266 FSD2A1L4K1 749 aa11.4□□□□□ -0.59
COL4A6-210ENST00000621266 EXOC5O00471 708 aa11.4□□□□□ -0.59
COL4A6-210ENST00000621266 DESP17661 470 aa11.4□□□□□ -0.59
COL4A6-210ENST00000621266 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.4□□□□□ -0.59
COL4A6-210ENST00000621266 LARP6Q9BRS8 491 aaKnown RBP11.39□□□□□ -0.59
COL4A6-210ENST00000621266 MIS18AQ9NYP9 233 aa11.39□□□□□ -0.59
COL4A6-210ENST00000621266 A0A1B0GUL7 405 aa11.39□□□□□ -0.59
COL4A6-210ENST00000621266 KIF5BP33176 963 aa11.39□□□□□ -0.59
COL4A6-210ENST00000621266 CCT4P50991 539 aaKnown RBP11.39□□□□□ -0.59
COL4A6-210ENST00000621266 SMAP1Q8IYB5 467 aaPredicted RBP11.39□□□□□ -0.59
COL4A6-210ENST00000621266 CEP131Q9UPN4 1083 aa11.39□□□□□ -0.59
COL4A6-210ENST00000621266 FCHSD2O94868 740 aa11.39□□□□□ -0.59
COL4A6-210ENST00000621266 CCDC171Q6TFL3 1326 aa11.39□□□□□ -0.59
COL4A6-210ENST00000621266 DNAJC21Q5F1R6 531 aaKnown RBP11.39□□□□□ -0.59
COL4A6-210ENST00000621266 AACSQ86V21 672 aa11.39□□□□□ -0.59
COL4A6-210ENST00000621266 CCDC114Q96M63 670 aa11.39□□□□□ -0.59
COL4A6-210ENST00000621266 NSRP1Q9H0G5 558 aaKnown RBP11.39□□□□□ -0.59
COL4A6-210ENST00000621266 ECM2O94769 699 aaPredicted RBP11.38□□□□□ -0.59
COL4A6-210ENST00000621266 KIF4AO95239 1232 aa11.38□□□□□ -0.59
COL4A6-210ENST00000621266 EBAG9O00559 213 aa11.38□□□□□ -0.59
COL4A6-210ENST00000621266 POTEJP0CG39 1038 aa11.38□□□□□ -0.59
COL4A6-210ENST00000621266 IL1RAPL2Q9NP60 686 aa11.38□□□□□ -0.59
COL4A6-210ENST00000621266 ANKIB1Q9P2G1 1089 aa11.38□□□□□ -0.59
COL4A6-210ENST00000621266 DNAI1Q9UI46 699 aa11.38□□□□□ -0.59
COL4A6-210ENST00000621266 MAP3K1Q13233 1512 aa11.38□□□□□ -0.59
COL4A6-210ENST00000621266 NSD3Q9BZ95 1437 aa11.38□□□□□ -0.59
COL4A6-210ENST00000621266 PHACTR2O75167 634 aa11.38□□□□□ -0.59
COL4A6-210ENST00000621266 FKBP4Q02790 459 aaKnown RBP eCLIP11.38□□□□□ -0.59
COL4A6-210ENST00000621266 MIPOL1Q8TD10 442 aa11.38□□□□□ -0.59
COL4A6-210ENST00000621266 CLEC11AQ9Y240 323 aa11.38□□□□□ -0.59
COL4A6-210ENST00000621266 XRCC6P12956 609 aaKnown RBP eCLIP11.38□□□□□ -0.59
COL4A6-210ENST00000621266 STX1AQ16623 288 aa11.38□□□□□ -0.59
COL4A6-210ENST00000621266 PHF8Q9UPP1 1060 aa11.38□□□□□ -0.59
COL4A6-210ENST00000621266 PTPN23Q9H3S7 1636 aa11.38□□□□□ -0.59
COL4A6-210ENST00000621266 MPHOSPH10O00566 681 aaKnown RBP11.38□□□□□ -0.59
COL4A6-210ENST00000621266 SRCIN1Q9C0H9 1055 aa11.38□□□□□ -0.59
COL4A6-210ENST00000621266 GNL3LQ9NVN8 582 aaKnown RBP11.38□□□□□ -0.59
COL4A6-210ENST00000621266 ZEB2O60315 1214 aa11.37□□□□□ -0.59
COL4A6-210ENST00000621266 STARD3NLO95772 234 aa11.37□□□□□ -0.59
COL4A6-210ENST00000621266 GTF3C6Q969F1 213 aa11.37□□□□□ -0.59
COL4A6-210ENST00000621266 SCAND2PQ9GZW5 306 aaPredicted RBP11.37□□□□□ -0.59
COL4A6-210ENST00000621266 FAM160A1Q05DH4 1040 aa11.37□□□□□ -0.59
COL4A6-210ENST00000621266 VPS36Q86VN1 386 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms