RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 U2SURPO15042 1029 aaKnown RBP10.53□□□□□ -0.72
CLK1-215ENST00000621181 PRR5LQ6MZQ0 368 aa10.53□□□□□ -0.72
CLK1-215ENST00000621181 SETDB2Q96T68 719 aa10.53□□□□□ -0.72
CLK1-215ENST00000621181 ANKRD31Q8N7Z5 1873 aa10.53□□□□□ -0.72
CLK1-215ENST00000621181 SCN7AQ01118 1682 aa10.52□□□□□ -0.72
CLK1-215ENST00000621181 ZNF316A6NFI3 1004 aaPredicted RBP10.52□□□□□ -0.73
CLK1-215ENST00000621181 IL6STP40189 918 aaPredicted RBP10.52□□□□□ -0.73
CLK1-215ENST00000621181 ST5P78524 1137 aa10.52□□□□□ -0.73
CLK1-215ENST00000621181 CNGB1Q14028 1251 aaPredicted RBP10.52□□□□□ -0.73
CLK1-215ENST00000621181 GAS2L2Q8NHY3 880 aa10.52□□□□□ -0.73
CLK1-215ENST00000621181 CNKSR1Q969H4 720 aa10.52□□□□□ -0.73
CLK1-215ENST00000621181 FMNL2Q96PY5 1086 aa10.52□□□□□ -0.73
CLK1-215ENST00000621181 KIF7Q2M1P5 1343 aa10.52□□□□□ -0.73
CLK1-215ENST00000621181 FER1L6Q2WGJ9 1857 aa10.52□□□□□ -0.73
CLK1-215ENST00000621181 DICER1Q9UPY3 1922 aaKnown RBP10.52□□□□□ -0.73
CLK1-215ENST00000621181 PRPF40BQ6NWY9 871 aaKnown RBP10.51□□□□□ -0.73
CLK1-215ENST00000621181 CREBZFQ9NS37 354 aa10.51□□□□□ -0.73
CLK1-215ENST00000621181 LTBP3Q9NS15 1303 aa10.51□□□□□ -0.73
CLK1-215ENST00000621181 COL11A2P13942 1736 aaPredicted RBP10.51□□□□□ -0.73
CLK1-215ENST00000621181 DDNO94850 711 aaPredicted RBP10.51□□□□□ -0.73
CLK1-215ENST00000621181 A1BGP04217 495 aa10.51□□□□□ -0.73
CLK1-215ENST00000621181 SOGA3Q5TF21 947 aa10.51□□□□□ -0.73
CLK1-215ENST00000621181 CHADLQ6NUI6 762 aa10.51□□□□□ -0.73
CLK1-215ENST00000621181 IL17REQ8NFR9 667 aa10.51□□□□□ -0.73
CLK1-215ENST00000621181 SRGNP10124 158 aa10.5□□□□□ -0.73
CLK1-215ENST00000621181 STYK1Q6J9G0 422 aa10.5□□□□□ -0.73
CLK1-215ENST00000621181 DZIP3Q86Y13 1208 aaKnown RBP10.5□□□□□ -0.73
CLK1-215ENST00000621181 MKRN1Q9UHC7 482 aaKnown RBP10.5□□□□□ -0.73
CLK1-215ENST00000621181 CACNA1SQ13698 1873 aa10.5□□□□□ -0.73
CLK1-215ENST00000621181 SLX4Q8IY92 1834 aa10.49□□□□□ -0.73
CLK1-215ENST00000621181 IQCA1LA6NCM1 817 aa10.49□□□□□ -0.73
CLK1-215ENST00000621181 BTBD11A6QL63 1104 aa10.49□□□□□ -0.73
CLK1-215ENST00000621181 PER1O15534 1290 aaPredicted RBP10.49□□□□□ -0.73
CLK1-215ENST00000621181 CAMTA2O94983 1202 aa10.49□□□□□ -0.73
CLK1-215ENST00000621181 POTEIP0CG38 1075 aa10.49□□□□□ -0.73
CLK1-215ENST00000621181 POTEJP0CG39 1038 aa10.49□□□□□ -0.73
CLK1-215ENST00000621181 NBPF5PQ86XG9 351 aaPredicted RBP10.49□□□□□ -0.73
CLK1-215ENST00000621181 MASTLQ96GX5 879 aa10.49□□□□□ -0.73
CLK1-215ENST00000621181 PIP4K2AP48426 406 aaPredicted RBP10.48□□□□□ -0.73
CLK1-215ENST00000621181 ZNF652Q9Y2D9 606 aa10.48□□□□□ -0.73
CLK1-215ENST00000621181 SIPA1L3O60292 1781 aaPredicted RBP10.48□□□□□ -0.73
CLK1-215ENST00000621181 CEMIPQ8WUJ3 1361 aa10.48□□□□□ -0.73
CLK1-215ENST00000621181 LDHDQ86WU2 507 aa10.47□□□□□ -0.73
CLK1-215ENST00000621181 COL3A1P02461 1466 aaPredicted RBP10.47□□□□□ -0.73
CLK1-215ENST00000621181 KCNQ3O43525 872 aa10.47□□□□□ -0.73
CLK1-215ENST00000621181 PRKAR2BP31323 418 aa10.47□□□□□ -0.73
CLK1-215ENST00000621181 CCDC93Q567U6 631 aa10.47□□□□□ -0.73
CLK1-215ENST00000621181 CLEC4GQ6UXB4 293 aa10.47□□□□□ -0.73
CLK1-215ENST00000621181 USP16Q9Y5T5 823 aa10.47□□□□□ -0.73
CLK1-215ENST00000621181 BCORQ6W2J9 1755 aa10.46□□□□□ -0.73
CLK1-215ENST00000621181 NPR1P16066 1061 aa10.46□□□□□ -0.74
CLK1-215ENST00000621181 EAPPQ56P03 285 aaPredicted RBP10.46□□□□□ -0.74
CLK1-215ENST00000621181 RTF1Q92541 710 aaKnown RBP10.46□□□□□ -0.74
CLK1-215ENST00000621181 L3MBTL3Q96JM7 780 aaPredicted RBP10.46□□□□□ -0.74
CLK1-215ENST00000621181 PHACTR3Q96KR7 559 aa10.46□□□□□ -0.74
CLK1-215ENST00000621181 TAF1DQ9H5J8 278 aaPredicted RBP10.46□□□□□ -0.74
CLK1-215ENST00000621181 ARFGEF2Q9Y6D5 1785 aa10.46□□□□□ -0.74
CLK1-215ENST00000621181 CNTNAP1P78357 1384 aa10.46□□□□□ -0.74
CLK1-215ENST00000621181 SNRPA1P09661 255 aaKnown RBP10.45□□□□□ -0.74
CLK1-215ENST00000621181 TPTE2Q6XPS3 522 aa10.45□□□□□ -0.74
CLK1-215ENST00000621181 AIDAQ96BJ3 306 aa10.45□□□□□ -0.74
CLK1-215ENST00000621181 CFAP53Q96M91 514 aa10.45□□□□□ -0.74
CLK1-215ENST00000621181 ZNF277Q9NRM2 450 aaPredicted RBP10.45□□□□□ -0.74
CLK1-215ENST00000621181 SCN4AP35499 1836 aa10.45□□□□□ -0.74
CLK1-215ENST00000621181 NPC1L1Q9UHC9 1359 aa10.45□□□□□ -0.74
CLK1-215ENST00000621181 PASKQ96RG2 1323 aa10.45□□□□□ -0.74
CLK1-215ENST00000621181 PRAMEF22A3QJZ6 481 aa10.44□□□□□ -0.74
CLK1-215ENST00000621181 TMEM88BA6NKF7 163 aa10.44□□□□□ -0.74
CLK1-215ENST00000621181 FOXN1O15353 648 aa10.44□□□□□ -0.74
CLK1-215ENST00000621181 GTF2E1P29083 439 aaPredicted RBP10.44□□□□□ -0.74
CLK1-215ENST00000621181 FKBP4Q02790 459 aaKnown RBP eCLIP10.44□□□□□ -0.74
CLK1-215ENST00000621181 MKRN4PQ13434 485 aaPredicted RBP10.44□□□□□ -0.74
CLK1-215ENST00000621181 C7orf43Q8WVR3 580 aa10.44□□□□□ -0.74
CLK1-215ENST00000621181 NIP7Q9Y221 180 aaKnown RBP eCLIP10.44□□□□□ -0.74
CLK1-215ENST00000621181 CLEC11AQ9Y240 323 aa10.44□□□□□ -0.74
CLK1-215ENST00000621181 FAM177BA6PVY3 158 aa10.44□□□□□ -0.74
CLK1-215ENST00000621181 MCM10Q7L590 875 aa10.44□□□□□ -0.74
CLK1-215ENST00000621181 RTKN2Q8IZC4 609 aa10.44□□□□□ -0.74
CLK1-215ENST00000621181 RSPH6AQ9H0K4 717 aa10.44□□□□□ -0.74
CLK1-215ENST00000621181 HACL1Q9UJ83 578 aa10.44□□□□□ -0.74
CLK1-215ENST00000621181 NUDCQ9Y266 331 aa10.44□□□□□ -0.74
CLK1-215ENST00000621181 ZNF541Q9H0D2 1346 aa10.43□□□□□ -0.74
CLK1-215ENST00000621181 EPHX2P34913 555 aa10.43□□□□□ -0.74
CLK1-215ENST00000621181 OLFM4Q6UX06 510 aa10.43□□□□□ -0.74
CLK1-215ENST00000621181 RNF123Q5XPI4 1314 aa10.43□□□□□ -0.74
CLK1-215ENST00000621181 U2AF1L5P0DN76 240 aaPredicted RBP10.42□□□□□ -0.74
CLK1-215ENST00000621181 ALDH1B1P30837 517 aa10.42□□□□□ -0.74
CLK1-215ENST00000621181 VEGFBP49765 207 aa10.42□□□□□ -0.74
CLK1-215ENST00000621181 U2AF1Q01081 240 aaKnown RBP eCLIP10.42□□□□□ -0.741e-7■■■□□ 17.6
CLK1-215ENST00000621181 PNMA8AQ86V59 439 aaPredicted RBP10.42□□□□□ -0.74
CLK1-215ENST00000621181 KLRG2A4D1S0 409 aaPredicted RBP10.42□□□□□ -0.74
CLK1-215ENST00000621181 ITGBL1O95965 494 aaPredicted RBP10.42□□□□□ -0.74
CLK1-215ENST00000621181 CTCFP49711 727 aaPredicted RBP10.42□□□□□ -0.74
CLK1-215ENST00000621181 PRDM10Q9NQV6 1147 aa10.42□□□□□ -0.74
CLK1-215ENST00000621181 NBPF26B4DH59 902 aa10.41□□□□□ -0.74
CLK1-215ENST00000621181 RGL2O15211 777 aa10.41□□□□□ -0.74
CLK1-215ENST00000621181 IARSP41252 1262 aaKnown RBP10.41□□□□□ -0.74
CLK1-215ENST00000621181 DCTN1Q14203 1278 aa10.41□□□□□ -0.74
CLK1-215ENST00000621181 MAP1SQ66K74 1059 aaPredicted RBP10.41□□□□□ -0.74
CLK1-215ENST00000621181 NBPF10Q6P3W6 841 aaKnown RBP10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms