RNA–Protein interactions for RNA: ENST00000620879.4

GTF2I-218, Transcript of general transcription factor IIi, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene GTF2I, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2I-218ENST00000620879 ROBO2Q9HCK4 1378 aa14.52□□□□□ -0.09
GTF2I-218ENST00000620879 TSR1Q2NL82 804 aaKnown RBP14.52□□□□□ -0.09
GTF2I-218ENST00000620879 DZIP3Q86Y13 1208 aaKnown RBP14.52□□□□□ -0.09
GTF2I-218ENST00000620879 ZNF592Q92610 1267 aa14.52□□□□□ -0.09
GTF2I-218ENST00000620879 CCDC47Q96A33 483 aaKnown RBP14.52□□□□□ -0.09
GTF2I-218ENST00000620879 ZNF496Q96IT1 587 aaPredicted RBP14.52□□□□□ -0.09
GTF2I-218ENST00000620879 ADGBQ8N7X0 1667 aa14.52□□□□□ -0.09
GTF2I-218ENST00000620879 ZBTB7BO15156 539 aaPredicted RBP14.52□□□□□ -0.09
GTF2I-218ENST00000620879 CDC5LQ99459 802 aaKnown RBP14.52□□□□□ -0.09
GTF2I-218ENST00000620879 KCNQ3O43525 872 aa14.51□□□□□ -0.09
GTF2I-218ENST00000620879 TPM3P06753 285 aa14.51□□□□□ -0.09
GTF2I-218ENST00000620879 RAB11FIP4Q86YS3 637 aa14.51□□□□□ -0.09
GTF2I-218ENST00000620879 PRR36Q9H6K5 1346 aa14.51□□□□□ -0.09
GTF2I-218ENST00000620879 USP5P45974 858 aa14.51□□□□□ -0.09
GTF2I-218ENST00000620879 KLHDC4Q8TBB5 520 aa14.51□□□□□ -0.09
GTF2I-218ENST00000620879 PRDM15P57071 1507 aaPredicted RBP14.51□□□□□ -0.09
GTF2I-218ENST00000620879 FAM89AQ96GI7 184 aa14.51□□□□□ -0.09
GTF2I-218ENST00000620879 ZSCAN31Q96LW9 406 aaPredicted RBP14.51□□□□□ -0.09
GTF2I-218ENST00000620879 CCDC43Q96MW1 224 aaKnown RBP14.51□□□□□ -0.09
GTF2I-218ENST00000620879 DCTPP1Q9H773 170 aa14.51□□□□□ -0.09
GTF2I-218ENST00000620879 SBNO2Q9Y2G9 1366 aa14.51□□□□□ -0.09
GTF2I-218ENST00000620879 RANBP6O60518 1105 aaKnown RBP14.5□□□□□ -0.09
GTF2I-218ENST00000620879 CCT2P78371 535 aaKnown RBP14.5□□□□□ -0.09
GTF2I-218ENST00000620879 IL17REQ8NFR9 667 aa14.5□□□□□ -0.09
GTF2I-218ENST00000620879 TMEM94Q12767 1356 aa14.5□□□□□ -0.09
GTF2I-218ENST00000620879 ZNF213O14771 459 aa14.5□□□□□ -0.09
GTF2I-218ENST00000620879 CCAR2Q8N163 923 aaKnown RBP14.5□□□□□ -0.09
GTF2I-218ENST00000620879 OTUD7AQ8TE49 926 aaPredicted RBP14.5□□□□□ -0.09
GTF2I-218ENST00000620879 TBC1D32Q96NH3 1257 aa14.5□□□□□ -0.09
GTF2I-218ENST00000620879 PRIM1P49642 420 aaKnown RBP14.5□□□□□ -0.09
GTF2I-218ENST00000620879 ATP2B3Q16720 1220 aa14.5□□□□□ -0.09
GTF2I-218ENST00000620879 SMC5Q8IY18 1101 aa14.5□□□□□ -0.09
GTF2I-218ENST00000620879 ZNF396Q96N95 335 aaPredicted RBP14.49□□□□□ -0.09
GTF2I-218ENST00000620879 PREX2Q70Z35 1606 aa14.49□□□□□ -0.09
GTF2I-218ENST00000620879 ERVK-7P63135 1459 aa14.49□□□□□ -0.09
GTF2I-218ENST00000620879 MRE11P49959 708 aa14.49□□□□□ -0.09
GTF2I-218ENST00000620879 POLR3DP05423 398 aaPredicted RBP14.49□□□□□ -0.09
GTF2I-218ENST00000620879 TPM1P09493 284 aa14.49□□□□□ -0.09
GTF2I-218ENST00000620879 SETDB2Q96T68 719 aa14.49□□□□□ -0.09
GTF2I-218ENST00000620879 LRRC2Q9BYS8 371 aa14.48□□□□□ -0.09
GTF2I-218ENST00000620879 MKNK2Q9HBH9 465 aa14.48□□□□□ -0.09
GTF2I-218ENST00000620879 GDPD2Q9HCC8 539 aa14.48□□□□□ -0.09
GTF2I-218ENST00000620879 PCDH11XQ9BZA7 1347 aa14.48□□□□□ -0.09
GTF2I-218ENST00000620879 PCDH11YQ9BZA8 1340 aa14.48□□□□□ -0.09
GTF2I-218ENST00000620879 SSFA2P28290 1259 aa14.48□□□□□ -0.09
GTF2I-218ENST00000620879 ANKRD20A12PQ8NF67 263 aa14.48□□□□□ -0.09
GTF2I-218ENST00000620879 CIZ1Q9ULV3 898 aaPredicted RBP14.48□□□□□ -0.09
GTF2I-218ENST00000620879 SEC24BO95487 1268 aa14.48□□□□□ -0.09
GTF2I-218ENST00000620879 FAM98CQ17RN3 349 aaKnown RBP14.48□□□□□ -0.09
GTF2I-218ENST00000620879 BICC1Q9H694 974 aaKnown RBP14.48□□□□□ -0.09
GTF2I-218ENST00000620879 NBPF7P0C2Y1 421 aaPredicted RBP14.48□□□□□ -0.09
GTF2I-218ENST00000620879 DNAJC10Q8IXB1 793 aa14.48□□□□□ -0.09
GTF2I-218ENST00000620879 ZNF622Q969S3 477 aaKnown RBP eCLIP14.48□□□□□ -0.095e-8■□□□□ 10.2
GTF2I-218ENST00000620879 SPATA32Q96LK8 384 aa14.48□□□□□ -0.09
GTF2I-218ENST00000620879 TRIM5Q9C035 493 aa14.48□□□□□ -0.09
GTF2I-218ENST00000620879 USP19O94966 1318 aa14.47□□□□□ -0.09
GTF2I-218ENST00000620879 EFCAB6Q5THR3 1501 aa14.47□□□□□ -0.09
GTF2I-218ENST00000620879 NLRP3Q96P20 1036 aa14.47□□□□□ -0.09
GTF2I-218ENST00000620879 CCDC152Q4G0S7 254 aa14.47□□□□□ -0.09
GTF2I-218ENST00000620879 SMARCC1Q92922 1105 aaPredicted RBP14.47□□□□□ -0.09
GTF2I-218ENST00000620879 BRPF3Q9ULD4 1205 aa14.47□□□□□ -0.09
GTF2I-218ENST00000620879 LIMCH1Q9UPQ0 1083 aa14.47□□□□□ -0.09
GTF2I-218ENST00000620879 C8orf34Q49A92 452 aa14.46□□□□□ -0.09
GTF2I-218ENST00000620879 IRS4O14654 1257 aaPredicted RBP14.46□□□□□ -0.09
GTF2I-218ENST00000620879 TIMM10P62072 90 aa14.46□□□□□ -0.09
GTF2I-218ENST00000620879 CCDC144CPQ8IYA2 1237 aa14.46□□□□□ -0.09
GTF2I-218ENST00000620879 TPM2P07951 284 aa14.46□□□□□ -0.09
GTF2I-218ENST00000620879 MPHOSPH10O00566 681 aaKnown RBP14.45□□□□□ -0.1
GTF2I-218ENST00000620879 ANKRD18AQ8IVF6 992 aa14.45□□□□□ -0.1
GTF2I-218ENST00000620879 SLC52A2Q9HAB3 445 aa14.45□□□□□ -0.1
GTF2I-218ENST00000620879 IFIT3O14879 490 aaKnown RBP14.45□□□□□ -0.1
GTF2I-218ENST00000620879 IL15P40933 162 aaPredicted RBP14.45□□□□□ -0.1
GTF2I-218ENST00000620879 PLEKHM2Q8IWE5 1019 aa14.45□□□□□ -0.1
GTF2I-218ENST00000620879 JMYQ8N9B5 988 aa14.45□□□□□ -0.1
GTF2I-218ENST00000620879 USP16Q9Y5T5 823 aa14.45□□□□□ -0.1
GTF2I-218ENST00000620879 OLFM4Q6UX06 510 aa14.45□□□□□ -0.1
GTF2I-218ENST00000620879 HOMER1Q86YM7 354 aa14.45□□□□□ -0.1
GTF2I-218ENST00000620879 CCDC24Q8N4L8 307 aa14.45□□□□□ -0.1
GTF2I-218ENST00000620879 TNMDQ9H2S6 317 aa14.45□□□□□ -0.1
GTF2I-218ENST00000620879 CDKL5O76039 1030 aa14.44□□□□□ -0.1
GTF2I-218ENST00000620879 HCLS1P14317 486 aaPredicted RBP14.44□□□□□ -0.1
GTF2I-218ENST00000620879 SOGA3Q5TF21 947 aa14.44□□□□□ -0.1
GTF2I-218ENST00000620879 NECAB1Q8N987 351 aa14.44□□□□□ -0.1
GTF2I-218ENST00000620879 TFIP11Q9UBB9 837 aaKnown RBP14.44□□□□□ -0.1
GTF2I-218ENST00000620879 SOS1Q07889 1333 aaPredicted RBP14.44□□□□□ -0.1
GTF2I-218ENST00000620879 PNMA6EA0A0J9YXQ4 647 aa14.44□□□□□ -0.1
GTF2I-218ENST00000620879 EIF4A1P60842 406 aaKnown RBP14.44□□□□□ -0.1
GTF2I-218ENST00000620879 TFCP2Q12800 502 aa14.44□□□□□ -0.1
GTF2I-218ENST00000620879 ESYT1Q9BSJ8 1104 aa14.44□□□□□ -0.1
GTF2I-218ENST00000620879 MICU3Q86XE3 530 aa14.44□□□□□ -0.1
GTF2I-218ENST00000620879 NOC3LQ8WTT2 800 aaKnown RBP14.44□□□□□ -0.1
GTF2I-218ENST00000620879 TSPY26PQ9H489 355 aa14.44□□□□□ -0.1
GTF2I-218ENST00000620879 PLEKHG1Q9ULL1 1385 aa14.44□□□□□ -0.1
GTF2I-218ENST00000620879 GOLGA8BA8MQT2 603 aa14.43□□□□□ -0.1
GTF2I-218ENST00000620879 BRPF1P55201 1214 aaPredicted RBP14.43□□□□□ -0.1
GTF2I-218ENST00000620879 CRACR2BQ8N4Y2 399 aaPredicted RBP14.43□□□□□ -0.1
GTF2I-218ENST00000620879 JAG2Q9Y219 1238 aa14.43□□□□□ -0.1
GTF2I-218ENST00000620879 IPO7O95373 1038 aaKnown RBP14.43□□□□□ -0.1
GTF2I-218ENST00000620879 TMOD2Q9NZR1 351 aa14.43□□□□□ -0.1
GTF2I-218ENST00000620879 RTCBQ9Y3I0 505 aaKnown RBP14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms