RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 NPHP1O15259 732 aa22.55■■□□□ 1.2
HMGN3-203ENST00000620514 PDE6BP35913 854 aa22.55■■□□□ 1.2
HMGN3-203ENST00000620514 ZNF622Q969S3 477 aaKnown RBP eCLIP22.55■■□□□ 1.28e-7■□□□□ 8.8
HMGN3-203ENST00000620514 MYL6BP14649 208 aa22.54■■□□□ 1.2
HMGN3-203ENST00000620514 ZEB1P37275 1124 aaPredicted RBP22.54■■□□□ 1.2
HMGN3-203ENST00000620514 ST5P78524 1137 aa22.54■■□□□ 1.2
HMGN3-203ENST00000620514 RASSF7Q02833 373 aa22.54■■□□□ 1.2
HMGN3-203ENST00000620514 NBPF5PQ86XG9 351 aaPredicted RBP22.54■■□□□ 1.2
HMGN3-203ENST00000620514 TRIM35Q9UPQ4 493 aa22.54■■□□□ 1.2
HMGN3-203ENST00000620514 NIP7Q9Y221 180 aaKnown RBP eCLIP22.54■■□□□ 1.2
HMGN3-203ENST00000620514 TTLL7Q6ZT98 887 aa22.53■■□□□ 1.2
HMGN3-203ENST00000620514 RNF181Q9P0P0 153 aa22.53■■□□□ 1.2
HMGN3-203ENST00000620514 SENP3-EIF4A1A0A087X0R7 540 aa22.52■■□□□ 1.2
HMGN3-203ENST00000620514 FAM177BA6PVY3 158 aa22.52■■□□□ 1.2
HMGN3-203ENST00000620514 RGL2O15211 777 aa22.52■■□□□ 1.2
HMGN3-203ENST00000620514 BABAM1Q9NWV8 329 aa22.52■■□□□ 1.2
HMGN3-203ENST00000620514 PDZRN3Q9UPQ7 1066 aa22.52■■□□□ 1.2
HMGN3-203ENST00000620514 KIF3CO14782 793 aa22.51■■□□□ 1.19
HMGN3-203ENST00000620514 ZNF219Q9P2Y4 722 aaPredicted RBP22.51■■□□□ 1.19
HMGN3-203ENST00000620514 SBF1O95248 1867 aa22.5■■□□□ 1.19
HMGN3-203ENST00000620514 EIF2S2P20042 333 aaKnown RBP22.5■■□□□ 1.19
HMGN3-203ENST00000620514 PRELPP51888 382 aa22.5■■□□□ 1.19
HMGN3-203ENST00000620514 MAP3K15Q6ZN16 1313 aa22.5■■□□□ 1.19
HMGN3-203ENST00000620514 ERVV-1B6SEH8 477 aa22.49■■□□□ 1.19
HMGN3-203ENST00000620514 SRGNP10124 158 aa22.49■■□□□ 1.19
HMGN3-203ENST00000620514 ZBTB3Q9H5J0 574 aa22.49■■□□□ 1.19
HMGN3-203ENST00000620514 LAS1LQ9Y4W2 734 aaKnown RBP22.49■■□□□ 1.19
HMGN3-203ENST00000620514 CHL1O00533 1208 aa22.48■■□□□ 1.19
HMGN3-203ENST00000620514 C21orf2O43822 256 aa22.48■■□□□ 1.19
HMGN3-203ENST00000620514 PDIA6Q15084 440 aa22.48■■□□□ 1.19
HMGN3-203ENST00000620514 KRT24Q2M2I5 525 aa22.48■■□□□ 1.19
HMGN3-203ENST00000620514 TPTE2Q6XPS3 522 aa22.48■■□□□ 1.19
HMGN3-203ENST00000620514 KIF6Q6ZMV9 814 aa22.48■■□□□ 1.19
HMGN3-203ENST00000620514 NMRK2Q9NPI5 230 aa22.48■■□□□ 1.19
HMGN3-203ENST00000620514 ERBB4Q15303 1308 aa22.48■■□□□ 1.19
HMGN3-203ENST00000620514 NFKBIEO00221 500 aa22.47■■□□□ 1.19
HMGN3-203ENST00000620514 ANXA1P04083 346 aa22.47■■□□□ 1.19
HMGN3-203ENST00000620514 PROSER3Q2NL68 480 aa22.47■■□□□ 1.19
HMGN3-203ENST00000620514 STYK1Q6J9G0 422 aa22.47■■□□□ 1.19
HMGN3-203ENST00000620514 LRP10Q7Z4F1 713 aa22.47■■□□□ 1.19
HMGN3-203ENST00000620514 NECTIN2Q92692 538 aa22.47■■□□□ 1.19
HMGN3-203ENST00000620514 NUP98P52948 1817 aa22.46■■□□□ 1.19
HMGN3-203ENST00000620514 CCDC184Q52MB2 194 aa22.46■■□□□ 1.19
HMGN3-203ENST00000620514 CNKSR1Q969H4 720 aa22.46■■□□□ 1.19
HMGN3-203ENST00000620514 MASTLQ96GX5 879 aa22.46■■□□□ 1.19
HMGN3-203ENST00000620514 LMNB1P20700 586 aa22.45■■□□□ 1.18
HMGN3-203ENST00000620514 SLX4Q8IY92 1834 aa22.45■■□□□ 1.18
HMGN3-203ENST00000620514 APAF1O14727 1248 aa22.44■■□□□ 1.18
HMGN3-203ENST00000620514 GPTP24298 496 aa22.44■■□□□ 1.18
HMGN3-203ENST00000620514 CACNA1SQ13698 1873 aa22.44■■□□□ 1.18
HMGN3-203ENST00000620514 PRPF40BQ6NWY9 871 aaKnown RBP22.44■■□□□ 1.18
HMGN3-203ENST00000620514 ABCC12Q96J65 1359 aa22.43■■□□□ 1.18
HMGN3-203ENST00000620514 UBN2Q6ZU65 1347 aa22.43■■□□□ 1.18
HMGN3-203ENST00000620514 KLRG2A4D1S0 409 aaPredicted RBP22.43■■□□□ 1.18
HMGN3-203ENST00000620514 NUTM1Q86Y26 1132 aa22.43■■□□□ 1.18
HMGN3-203ENST00000620514 GTF2E1P29083 439 aaPredicted RBP22.42■■□□□ 1.18
HMGN3-203ENST00000620514 GIGYF2Q6Y7W6 1299 aaKnown RBP22.42■■□□□ 1.18
HMGN3-203ENST00000620514 ZNF316A6NFI3 1004 aaPredicted RBP22.41■■□□□ 1.18
HMGN3-203ENST00000620514 NPR1P16066 1061 aa22.41■■□□□ 1.18
HMGN3-203ENST00000620514 ERFEQ4G0M1 354 aa22.41■■□□□ 1.18
HMGN3-203ENST00000620514 SUSD4Q5VX71 490 aa22.41■■□□□ 1.18
HMGN3-203ENST00000620514 ZNF34Q8IZ26 560 aa22.41■■□□□ 1.18
HMGN3-203ENST00000620514 TNRC6CQ9HCJ0 1690 aaKnown RBP22.41■■□□□ 1.18
HMGN3-203ENST00000620514 CCDC88AQ3V6T2 1871 aa22.41■■□□□ 1.18
HMGN3-203ENST00000620514 ARFGEF2Q9Y6D5 1785 aa22.4■■□□□ 1.18
HMGN3-203ENST00000620514 CFAP44Q96MT7 982 aa22.4■■□□□ 1.18
HMGN3-203ENST00000620514 NYXQ9GZU5 481 aa22.4■■□□□ 1.18
HMGN3-203ENST00000620514 FER1L6Q2WGJ9 1857 aa22.4■■□□□ 1.18
HMGN3-203ENST00000620514 KDM2BQ8NHM5 1336 aa22.39■■□□□ 1.18
HMGN3-203ENST00000620514 AIMP1Q12904 312 aaKnown RBP22.39■■□□□ 1.17
HMGN3-203ENST00000620514 COPS6Q7L5N1 327 aa22.39■■□□□ 1.17
HMGN3-203ENST00000620514 XAGE3Q8WTP9 111 aa22.39■■□□□ 1.17
HMGN3-203ENST00000620514 C7orf43Q8WVR3 580 aa22.39■■□□□ 1.17
HMGN3-203ENST00000620514 RRAGCQ9HB90 399 aa22.38■■□□□ 1.17
HMGN3-203ENST00000620514 MBIPQ9NS73 344 aa22.38■■□□□ 1.17
HMGN3-203ENST00000620514 TIAM2Q8IVF5 1701 aa22.37■■□□□ 1.17
HMGN3-203ENST00000620514 ZC3H4Q9UPT8 1303 aaKnown RBP22.37■■□□□ 1.17
HMGN3-203ENST00000620514 NTSR2O95665 410 aa22.37■■□□□ 1.17
HMGN3-203ENST00000620514 ZNF853P0CG23 659 aa22.37■■□□□ 1.17
HMGN3-203ENST00000620514 OLFM4Q6UX06 510 aa22.37■■□□□ 1.17
HMGN3-203ENST00000620514 TAOK3Q9H2K8 898 aa22.37■■□□□ 1.17
HMGN3-203ENST00000620514 DDX21Q9NR30 783 aaKnown RBP eCLIP22.37■■□□□ 1.17
HMGN3-203ENST00000620514 CHPF2Q9P2E5 772 aa22.37■■□□□ 1.17
HMGN3-203ENST00000620514 IBTKQ9P2D0 1353 aaPredicted RBP22.37■■□□□ 1.17
HMGN3-203ENST00000620514 TOMM70O94826 608 aa22.36■■□□□ 1.17
HMGN3-203ENST00000620514 HDGFL1Q5TGJ6 251 aa22.36■■□□□ 1.17
HMGN3-203ENST00000620514 LTBP3Q9NS15 1303 aa22.35■■□□□ 1.17
HMGN3-203ENST00000620514 HSPA6P17066 643 aa22.35■■□□□ 1.17
HMGN3-203ENST00000620514 CRY2Q49AN0 593 aa22.35■■□□□ 1.17
HMGN3-203ENST00000620514 SOGA3Q5TF21 947 aa22.35■■□□□ 1.17
HMGN3-203ENST00000620514 GLTPD2A6NH11 291 aa22.34■■□□□ 1.17
HMGN3-203ENST00000620514 PARP10Q53GL7 1025 aa22.34■■□□□ 1.17
HMGN3-203ENST00000620514 DUSP27Q5VZP5 1158 aa22.34■■□□□ 1.17
HMGN3-203ENST00000620514 IFT57Q9NWB7 429 aa22.34■■□□□ 1.17
HMGN3-203ENST00000620514 HOXB7P09629 217 aa22.33■■□□□ 1.17
HMGN3-203ENST00000620514 CCDC93Q567U6 631 aa22.33■■□□□ 1.17
HMGN3-203ENST00000620514 C3orf67Q6ZVT6 689 aa22.33■■□□□ 1.17
HMGN3-203ENST00000620514 PPP1R42Q7Z4L9 355 aa22.33■■□□□ 1.17
HMGN3-203ENST00000620514 RIC1Q4ADV7 1423 aa22.32■■□□□ 1.16
HMGN3-203ENST00000620514 ALDH1B1P30837 517 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms