RNA–Protein interactions for RNA: ENST00000620502.4

BRCC3-209, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRCC3, Length 882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-209ENST00000620502 IL2RBP14784 551 aa8.89□□□□□ -0.99
BRCC3-209ENST00000620502 DNAJB2P25686 324 aa8.89□□□□□ -0.99
BRCC3-209ENST00000620502 FAM196AQ6ZSG2 479 aa8.89□□□□□ -0.99
BRCC3-209ENST00000620502 MARCH10Q8NA82 808 aaPredicted RBP8.89□□□□□ -0.99
BRCC3-209ENST00000620502 PHOX2BQ99453 314 aa8.89□□□□□ -0.99
BRCC3-209ENST00000620502 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.89□□□□□ -0.99
BRCC3-209ENST00000620502 RGPD1P0DJD0 1748 aa8.88□□□□□ -0.99
BRCC3-209ENST00000620502 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.88□□□□□ -0.99
BRCC3-209ENST00000620502 CC2D1BQ5T0F9 858 aaKnown RBP8.88□□□□□ -0.99
BRCC3-209ENST00000620502 SWT1Q5T5J6 900 aaKnown RBP8.88□□□□□ -0.99
BRCC3-209ENST00000620502 TMEM134Q9H6X4 195 aa8.88□□□□□ -0.99
BRCC3-209ENST00000620502 SBF2Q86WG5 1849 aa8.88□□□□□ -0.99
BRCC3-209ENST00000620502 TNS1Q9HBL0 1735 aaKnown RBP8.88□□□□□ -0.99
BRCC3-209ENST00000620502 PTPN5P54829 565 aa8.87□□□□□ -0.99
BRCC3-209ENST00000620502 USHBP1Q8N6Y0 703 aa8.87□□□□□ -0.99
BRCC3-209ENST00000620502 SHANK3Q9BYB0 1731 aa8.87□□□□□ -0.99
BRCC3-209ENST00000620502 NCAPD2Q15021 1401 aa8.87□□□□□ -0.99
BRCC3-209ENST00000620502 TNS2Q63HR2 1409 aa8.87□□□□□ -0.99
BRCC3-209ENST00000620502 MEGF6O75095 1541 aa8.86□□□□□ -0.99
BRCC3-209ENST00000620502 TRIM37O94972 964 aa8.86□□□□□ -0.99
BRCC3-209ENST00000620502 EIF4A2Q14240 407 aaKnown RBP8.86□□□□□ -0.99
BRCC3-209ENST00000620502 CCDC102AQ96A19 550 aa8.86□□□□□ -0.99
BRCC3-209ENST00000620502 OVOS2A0A0G2JMS6 1433 aa8.86□□□□□ -0.99
BRCC3-209ENST00000620502 BCL9O00512 1426 aa8.86□□□□□ -0.99
BRCC3-209ENST00000620502 MTHFSP49914 203 aa8.85□□□□□ -0.99
BRCC3-209ENST00000620502 PTF1AQ7RTS3 328 aa8.85□□□□□ -0.99
BRCC3-209ENST00000620502 DEFB132Q7Z7B7 95 aa8.85□□□□□ -0.99
BRCC3-209ENST00000620502 TSR3Q9UJK0 312 aaKnown RBP8.85□□□□□ -0.99
BRCC3-209ENST00000620502 IL13P35225 146 aa8.84□□□□□ -0.99
BRCC3-209ENST00000620502 SF3B2Q13435 895 aaKnown RBP8.84□□□□□ -0.99
BRCC3-209ENST00000620502 CNGB1Q14028 1251 aaPredicted RBP8.84□□□□□ -0.99
BRCC3-209ENST00000620502 ZCRB1Q8TBF4 217 aaKnown RBP8.84□□□□□ -0.99
BRCC3-209ENST00000620502 WBP1LQ9NX94 342 aa8.84□□□□□ -0.99
BRCC3-209ENST00000620502 HPS5Q9UPZ3 1129 aa8.84□□□□□ -0.99
BRCC3-209ENST00000620502 IGSF1Q8N6C5 1336 aa8.83□□□□□ -1
BRCC3-209ENST00000620502 PKD1L3Q7Z443 1732 aa8.83□□□□□ -1
BRCC3-209ENST00000620502 EP400Q96L91 3159 aa8.83□□□□□ -1
BRCC3-209ENST00000620502 APBA3O96018 575 aa8.83□□□□□ -1
BRCC3-209ENST00000620502 TATP17735 454 aaPredicted RBP8.83□□□□□ -1
BRCC3-209ENST00000620502 SLF2Q8IX21 1173 aa8.83□□□□□ -1
BRCC3-209ENST00000620502 KRI1Q8N9T8 703 aaKnown RBP8.83□□□□□ -1
BRCC3-209ENST00000620502 DDX54Q8TDD1 881 aaKnown RBP8.83□□□□□ -1
BRCC3-209ENST00000620502 RAPGEF4Q8WZA2 1011 aa8.83□□□□□ -1
BRCC3-209ENST00000620502 CAMKK2Q96RR4 588 aa8.83□□□□□ -1
BRCC3-209ENST00000620502 NHSQ6T4R5 1651 aa8.82□□□□□ -1
BRCC3-209ENST00000620502 KCNQ2O43526 872 aa8.82□□□□□ -1
BRCC3-209ENST00000620502 BAG6P46379 1132 aa8.82□□□□□ -1
BRCC3-209ENST00000620502 DDX10Q13206 875 aaKnown RBP8.82□□□□□ -1
BRCC3-209ENST00000620502 NLRP7Q8WX94 980 aa8.82□□□□□ -1
BRCC3-209ENST00000620502 PPP2R1AP30153 589 aa8.81□□□□□ -1
BRCC3-209ENST00000620502 PPP4CP60510 307 aa8.81□□□□□ -1
BRCC3-209ENST00000620502 EZH2Q15910 746 aaKnown RBP8.81□□□□□ -1
BRCC3-209ENST00000620502 NYAP1Q6ZVC0 841 aa8.81□□□□□ -1
BRCC3-209ENST00000620502 DAXXQ9UER7 740 aaPredicted RBP8.81□□□□□ -1
BRCC3-209ENST00000620502 COL3A1P02461 1466 aaPredicted RBP8.81□□□□□ -1
BRCC3-209ENST00000620502 RREB1Q92766 1687 aa8.81□□□□□ -1
BRCC3-209ENST00000620502 DOT1LQ8TEK3 1739 aa8.8□□□□□ -1
BRCC3-209ENST00000620502 PLSCR1O15162 318 aa8.8□□□□□ -1
BRCC3-209ENST00000620502 CYP27B1O15528 508 aa8.8□□□□□ -1
BRCC3-209ENST00000620502 RNF40O75150 1001 aa8.8□□□□□ -1
BRCC3-209ENST00000620502 AEBP1Q8IUX7 1158 aa8.8□□□□□ -1
BRCC3-209ENST00000620502 ACSBG1Q96GR2 724 aa8.8□□□□□ -1
BRCC3-209ENST00000620502 PARD3Q8TEW0 1356 aa8.8□□□□□ -1
BRCC3-209ENST00000620502 RGPD3A6NKT7 1758 aaPredicted RBP8.8□□□□□ -1
BRCC3-209ENST00000620502 RGPD4Q7Z3J3 1758 aa8.8□□□□□ -1
BRCC3-209ENST00000620502 BTAF1O14981 1849 aa8.8□□□□□ -1
BRCC3-209ENST00000620502 KDRP35968 1356 aa8.79□□□□□ -1
BRCC3-209ENST00000620502 PLEKHG2Q9H7P9 1386 aa8.79□□□□□ -1
BRCC3-209ENST00000620502 DIAPH1O60610 1272 aaKnown RBP8.79□□□□□ -1
BRCC3-209ENST00000620502 SLC4A3P48751 1232 aa8.79□□□□□ -1
BRCC3-209ENST00000620502 SULT6B1Q6IMI4 303 aa8.79□□□□□ -1
BRCC3-209ENST00000620502 SPG7Q9UQ90 795 aa8.79□□□□□ -1
BRCC3-209ENST00000620502 NUP188Q5SRE5 1749 aa8.79□□□□□ -1
BRCC3-209ENST00000620502 PCDH11XQ9BZA7 1347 aa8.79□□□□□ -1
BRCC3-209ENST00000620502 PCDH11YQ9BZA8 1340 aa8.79□□□□□ -1
BRCC3-209ENST00000620502 TOGARAM1Q9Y4F4 1720 aa8.78□□□□□ -1
BRCC3-209ENST00000620502 SLC10A3P09131 477 aa8.78□□□□□ -1
BRCC3-209ENST00000620502 NECTIN2Q92692 538 aa8.78□□□□□ -1
BRCC3-209ENST00000620502 ITGB4P16144 1822 aa8.77□□□□□ -1
BRCC3-209ENST00000620502 HMOX1P09601 288 aa8.77□□□□□ -1.01
BRCC3-209ENST00000620502 PHKG2P15735 406 aa8.77□□□□□ -1.01
BRCC3-209ENST00000620502 AK7Q96M32 723 aa8.77□□□□□ -1.01
BRCC3-209ENST00000620502 TMUB1Q9BVT8 246 aa8.77□□□□□ -1.01
BRCC3-209ENST00000620502 SLC24A3Q9HC58 644 aa8.77□□□□□ -1.01
BRCC3-209ENST00000620502 APLP1P51693 650 aa8.76□□□□□ -1.01
BRCC3-209ENST00000620502 MDM2Q00987 491 aaPredicted RBP8.76□□□□□ -1.01
BRCC3-209ENST00000620502 AMHR2Q16671 573 aa8.76□□□□□ -1.01
BRCC3-209ENST00000620502 AMOTQ4VCS5 1084 aa8.76□□□□□ -1.01
BRCC3-209ENST00000620502 PLEKHO1Q53GL0 409 aaPredicted RBP8.76□□□□□ -1.01
BRCC3-209ENST00000620502 IFNL2Q8IZJ0 200 aa8.76□□□□□ -1.01
BRCC3-209ENST00000620502 LY75O60449 1722 aa8.75□□□□□ -1.01
BRCC3-209ENST00000620502 TRIM66O15016 1216 aa8.75□□□□□ -1.01
BRCC3-209ENST00000620502 RALBP1Q15311 655 aa8.75□□□□□ -1.01
BRCC3-209ENST00000620502 TXNRD1Q16881 649 aa8.75□□□□□ -1.01
BRCC3-209ENST00000620502 SYTL4Q96C24 671 aaPredicted RBP8.75□□□□□ -1.01
BRCC3-209ENST00000620502 CFAP53Q96M91 514 aa8.75□□□□□ -1.01
BRCC3-209ENST00000620502 KAT6BQ8WYB5 2073 aa8.75□□□□□ -1.01
BRCC3-209ENST00000620502 U2SURPO15042 1029 aaKnown RBP8.74□□□□□ -1.01
BRCC3-209ENST00000620502 REPIN1Q9BWE0 567 aaKnown RBP8.74□□□□□ -1.01
BRCC3-209ENST00000620502 DDX11L8A8MPP1 907 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms