RNA–Protein interactions for RNA: ENST00000619890.1

SSX4B-202, Transcript of SSX family member 4B, humanhuman

TSL 5 BASIC

Gene SSX4B, Length 1,092 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4B-202ENST00000619890 MPRIPQ6WCQ1 1025 aa8.14□□□□□ -1.11
SSX4B-202ENST00000619890 IFNL2Q8IZJ0 200 aa8.14□□□□□ -1.11
SSX4B-202ENST00000619890 BBXQ8WY36 941 aaPredicted RBP8.14□□□□□ -1.11
SSX4B-202ENST00000619890 TAF1LQ8IZX4 1826 aa8.14□□□□□ -1.11
SSX4B-202ENST00000619890 MRC1P22897 1456 aa8.13□□□□□ -1.11
SSX4B-202ENST00000619890 KIF13BQ9NQT8 1826 aa8.13□□□□□ -1.11
SSX4B-202ENST00000619890 PASKQ96RG2 1323 aa8.13□□□□□ -1.11
SSX4B-202ENST00000619890 CYP27B1O15528 508 aa8.13□□□□□ -1.11
SSX4B-202ENST00000619890 DIAPH1O60610 1272 aaKnown RBP8.13□□□□□ -1.11
SSX4B-202ENST00000619890 LMNB1P20700 586 aa8.13□□□□□ -1.11
SSX4B-202ENST00000619890 IL13P35225 146 aa8.13□□□□□ -1.11
SSX4B-202ENST00000619890 MTHFSP49914 203 aa8.13□□□□□ -1.11
SSX4B-202ENST00000619890 LINC00116Q8NCU8 138 aa8.13□□□□□ -1.11
SSX4B-202ENST00000619890 SLAIN1Q8ND83 568 aa8.13□□□□□ -1.11
SSX4B-202ENST00000619890 SMARCC1Q92922 1105 aaPredicted RBP8.13□□□□□ -1.11
SSX4B-202ENST00000619890 CFAP53Q96M91 514 aa8.13□□□□□ -1.11
SSX4B-202ENST00000619890 KDM6AO15550 1401 aaPredicted RBP8.12□□□□□ -1.11
SSX4B-202ENST00000619890 C4BP0C0L5 1744 aa8.12□□□□□ -1.11
SSX4B-202ENST00000619890 TMEM88BA6NKF7 163 aa8.12□□□□□ -1.11
SSX4B-202ENST00000619890 GNPATO15228 680 aa8.12□□□□□ -1.11
SSX4B-202ENST00000619890 PHKG2P15735 406 aa8.12□□□□□ -1.11
SSX4B-202ENST00000619890 RASSF7Q02833 373 aa8.12□□□□□ -1.11
SSX4B-202ENST00000619890 PLEKHO1Q53GL0 409 aaPredicted RBP8.12□□□□□ -1.11
SSX4B-202ENST00000619890 PRPF38BQ5VTL8 546 aaKnown RBP8.12□□□□□ -1.11
SSX4B-202ENST00000619890 DPY19L2Q6NUT2 758 aa8.12□□□□□ -1.11
SSX4B-202ENST00000619890 CHRNA5P30532 468 aa8.11□□□□□ -1.11
SSX4B-202ENST00000619890 DEFB115Q30KQ5 88 aa8.11□□□□□ -1.11
SSX4B-202ENST00000619890 C1orf141Q5JVX7 400 aa8.11□□□□□ -1.11
SSX4B-202ENST00000619890 TRAPPC3LQ5T215 181 aa8.11□□□□□ -1.11
SSX4B-202ENST00000619890 SULT6B1Q6IMI4 303 aa8.11□□□□□ -1.11
SSX4B-202ENST00000619890 SPOCK2Q92563 424 aa8.11□□□□□ -1.11
SSX4B-202ENST00000619890 MCOLN1Q9GZU1 580 aa8.11□□□□□ -1.11
SSX4B-202ENST00000619890 PARP3Q9Y6F1 533 aa8.11□□□□□ -1.11
SSX4B-202ENST00000619890 COL5A3P25940 1745 aaPredicted RBP8.11□□□□□ -1.11
SSX4B-202ENST00000619890 UBR3Q6ZT12 1888 aa8.11□□□□□ -1.11
SSX4B-202ENST00000619890 LOC102724428A0A0B4J2F2 783 aa8.1□□□□□ -1.11
SSX4B-202ENST00000619890 RASSF10A6NK89 507 aa8.1□□□□□ -1.11
SSX4B-202ENST00000619890 ITGBL1O95965 494 aaPredicted RBP8.1□□□□□ -1.11
SSX4B-202ENST00000619890 GYS1P13807 737 aa8.1□□□□□ -1.11
SSX4B-202ENST00000619890 SIK1P57059 783 aa8.1□□□□□ -1.11
SSX4B-202ENST00000619890 ZNF530Q6P9A1 599 aaPredicted RBP8.1□□□□□ -1.11
SSX4B-202ENST00000619890 AEBP1Q8IUX7 1158 aa8.1□□□□□ -1.11
SSX4B-202ENST00000619890 PIGBQ92521 554 aa8.1□□□□□ -1.11
SSX4B-202ENST00000619890 TMOD3Q9NYL9 352 aa8.1□□□□□ -1.11
SSX4B-202ENST00000619890 SBF1O95248 1867 aa8.1□□□□□ -1.11
SSX4B-202ENST00000619890 ARFGEF1Q9Y6D6 1849 aa8.1□□□□□ -1.11
SSX4B-202ENST00000619890 WDR33Q9C0J8 1336 aaKnown RBP8.09□□□□□ -1.11
SSX4B-202ENST00000619890 BRCA1P38398 1863 aaKnown RBP8.09□□□□□ -1.11
SSX4B-202ENST00000619890 ERVV-2B6SEH9 535 aa8.09□□□□□ -1.11
SSX4B-202ENST00000619890 PPP2R1AP30153 589 aa8.09□□□□□ -1.11
SSX4B-202ENST00000619890 ITPK1Q13572 414 aa8.09□□□□□ -1.11
SSX4B-202ENST00000619890 ARHGEF1Q92888 912 aaKnown RBP8.09□□□□□ -1.11
SSX4B-202ENST00000619890 NUDCQ9Y266 331 aa8.09□□□□□ -1.11
SSX4B-202ENST00000619890 SIPA1L3O60292 1781 aaPredicted RBP8.09□□□□□ -1.11
SSX4B-202ENST00000619890 UBR2Q8IWV8 1755 aa8.09□□□□□ -1.11
SSX4B-202ENST00000619890 GOLGA2Q08379 1002 aa8.08□□□□□ -1.12
SSX4B-202ENST00000619890 RALBP1Q15311 655 aa8.08□□□□□ -1.12
SSX4B-202ENST00000619890 AKAP4Q5JQC9 854 aa8.08□□□□□ -1.12
SSX4B-202ENST00000619890 TSHZ2Q9NRE2 1034 aa8.08□□□□□ -1.12
SSX4B-202ENST00000619890 TJP1Q07157 1748 aa8.08□□□□□ -1.12
SSX4B-202ENST00000619890 U2SURPO15042 1029 aaKnown RBP8.07□□□□□ -1.12
SSX4B-202ENST00000619890 HMOX1P09601 288 aa8.07□□□□□ -1.12
SSX4B-202ENST00000619890 ATP6V1AP38606 617 aa8.07□□□□□ -1.12
SSX4B-202ENST00000619890 CNGB1Q14028 1251 aaPredicted RBP8.07□□□□□ -1.12
SSX4B-202ENST00000619890 GAS2L2Q8NHY3 880 aa8.07□□□□□ -1.12
SSX4B-202ENST00000619890 BEGAINQ9BUH8 593 aa8.07□□□□□ -1.12
SSX4B-202ENST00000619890 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.07□□□□□ -1.12
SSX4B-202ENST00000619890 TSKSQ9UJT2 592 aa8.07□□□□□ -1.12
SSX4B-202ENST00000619890 RTCBQ9Y3I0 505 aaKnown RBP8.07□□□□□ -1.12
SSX4B-202ENST00000619890 A0A0C4DFX4 3053 aa8.06□□□□□ -1.12
SSX4B-202ENST00000619890 NFKBIEO00221 500 aa8.06□□□□□ -1.12
SSX4B-202ENST00000619890 RGL2O15211 777 aa8.06□□□□□ -1.12
SSX4B-202ENST00000619890 DDNO94850 711 aaPredicted RBP8.06□□□□□ -1.12
SSX4B-202ENST00000619890 PSEN1P49768 467 aa8.06□□□□□ -1.12
SSX4B-202ENST00000619890 MKRN3Q13064 507 aaKnown RBP8.06□□□□□ -1.12
SSX4B-202ENST00000619890 DGKZQ13574 1117 aa8.06□□□□□ -1.12
SSX4B-202ENST00000619890 LDHDQ86WU2 507 aa8.06□□□□□ -1.12
SSX4B-202ENST00000619890 PDCD7Q8N8D1 485 aaKnown RBP8.06□□□□□ -1.12
SSX4B-202ENST00000619890 MYBBP1AQ9BQG0 1328 aaKnown RBP8.05□□□□□ -1.12
SSX4B-202ENST00000619890 SNPHO15079 494 aa8.05□□□□□ -1.12
SSX4B-202ENST00000619890 ST18O60284 1047 aa8.05□□□□□ -1.12
SSX4B-202ENST00000619890 RFC4P35249 363 aa8.05□□□□□ -1.12
SSX4B-202ENST00000619890 CABP4P57796 275 aa8.05□□□□□ -1.12
SSX4B-202ENST00000619890 DDR1Q08345 913 aa8.05□□□□□ -1.12
SSX4B-202ENST00000619890 GPR101Q96P66 508 aaPredicted RBP8.05□□□□□ -1.12
SSX4B-202ENST00000619890 RSPH6AQ9H0K4 717 aa8.05□□□□□ -1.12
SSX4B-202ENST00000619890 ASAP1Q9ULH1 1129 aa8.05□□□□□ -1.12
SSX4B-202ENST00000619890 C4AP0C0L4 1744 aa8.05□□□□□ -1.12
SSX4B-202ENST00000619890 DLG5Q8TDM6 1919 aa8.04□□□□□ -1.12
SSX4B-202ENST00000619890 NEFMP07197 916 aa8.04□□□□□ -1.12
SSX4B-202ENST00000619890 U2AF1L5P0DN76 240 aaPredicted RBP8.04□□□□□ -1.12
SSX4B-202ENST00000619890 SOX10P56693 466 aa8.04□□□□□ -1.12
SSX4B-202ENST00000619890 U2AF1Q01081 240 aaKnown RBP eCLIP8.04□□□□□ -1.12
SSX4B-202ENST00000619890 PDAP1Q13442 181 aaKnown RBP8.04□□□□□ -1.12
SSX4B-202ENST00000619890 ERFEQ4G0M1 354 aa8.04□□□□□ -1.12
SSX4B-202ENST00000619890 RC3H1Q5TC82 1133 aaKnown RBP8.04□□□□□ -1.12
SSX4B-202ENST00000619890 SPRYD3Q8NCJ5 442 aa8.04□□□□□ -1.12
SSX4B-202ENST00000619890 L3MBTL3Q96JM7 780 aaPredicted RBP8.04□□□□□ -1.12
SSX4B-202ENST00000619890 TMEM121BQ9BXQ6 578 aaPredicted RBP8.04□□□□□ -1.12
SSX4B-202ENST00000619890 TAF1DQ9H5J8 278 aaPredicted RBP8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms