RNA–Protein interactions for RNA: ENST00000619601.1

GAPDH-211, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 5 BASIC

Gene GAPDH, Length 1,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-211ENST00000619601 H0YIN7 160 aa14.36□□□□□ -0.11
GAPDH-211ENST00000619601 NPHP1O15259 732 aa14.36□□□□□ -0.11
GAPDH-211ENST00000619601 PDE6BP35913 854 aa14.36□□□□□ -0.11
GAPDH-211ENST00000619601 PIP4K2AP48426 406 aaPredicted RBP14.36□□□□□ -0.11
GAPDH-211ENST00000619601 NEUROD2Q15784 382 aa14.36□□□□□ -0.11
GAPDH-211ENST00000619601 BRIP1Q9BX63 1249 aa14.36□□□□□ -0.11
GAPDH-211ENST00000619601 RNF181Q9P0P0 153 aa14.36□□□□□ -0.11
GAPDH-211ENST00000619601 RRP7AQ9Y3A4 280 aaKnown RBP14.36□□□□□ -0.11
GAPDH-211ENST00000619601 CCDC88AQ3V6T2 1871 aa14.35□□□□□ -0.11
GAPDH-211ENST00000619601 APLP1P51693 650 aa14.35□□□□□ -0.11
GAPDH-211ENST00000619601 ST5P78524 1137 aa14.35□□□□□ -0.11
GAPDH-211ENST00000619601 CNBD1Q8NA66 436 aa14.35□□□□□ -0.11
GAPDH-211ENST00000619601 ERVV-1B6SEH8 477 aa14.34□□□□□ -0.11
GAPDH-211ENST00000619601 PRR5LQ6MZQ0 368 aa14.34□□□□□ -0.11
GAPDH-211ENST00000619601 KIF6Q6ZMV9 814 aa14.34□□□□□ -0.11
GAPDH-211ENST00000619601 C2CD5Q86YS7 1000 aa14.34□□□□□ -0.11
GAPDH-211ENST00000619601 TRIM35Q9UPQ4 493 aa14.34□□□□□ -0.11
GAPDH-211ENST00000619601 TNRC6CQ9HCJ0 1690 aaKnown RBP14.33□□□□□ -0.11
GAPDH-211ENST00000619601 WDR90Q96KV7 1748 aa14.33□□□□□ -0.12
GAPDH-211ENST00000619601 CHL1O00533 1208 aa14.33□□□□□ -0.12
GAPDH-211ENST00000619601 CALD1Q05682 793 aaKnown RBP14.33□□□□□ -0.12
GAPDH-211ENST00000619601 NBPF5PQ86XG9 351 aaPredicted RBP14.33□□□□□ -0.12
GAPDH-211ENST00000619601 TTLL6Q8N841 843 aa14.33□□□□□ -0.12
GAPDH-211ENST00000619601 ANKRD31Q8N7Z5 1873 aa14.33□□□□□ -0.12
GAPDH-211ENST00000619601 ANP32CO43423 234 aa14.32□□□□□ -0.12
GAPDH-211ENST00000619601 MYL6BP14649 208 aa14.32□□□□□ -0.12
GAPDH-211ENST00000619601 RASSF7Q02833 373 aa14.32□□□□□ -0.12
GAPDH-211ENST00000619601 TPTE2Q6XPS3 522 aa14.32□□□□□ -0.12
GAPDH-211ENST00000619601 C16orf71Q8IYS4 520 aaPredicted RBP14.32□□□□□ -0.12
GAPDH-211ENST00000619601 DNAJC5GQ8N7S2 189 aa14.32□□□□□ -0.12
GAPDH-211ENST00000619601 RBM46Q8TBY0 533 aaKnown RBP14.32□□□□□ -0.12
GAPDH-211ENST00000619601 RRAGCQ9HB90 399 aa14.32□□□□□ -0.12
GAPDH-211ENST00000619601 NIP7Q9Y221 180 aaKnown RBP eCLIP14.32□□□□□ -0.121e-25■□□□□ 8.2
GAPDH-211ENST00000619601 MAP3K15Q6ZN16 1313 aa14.32□□□□□ -0.12
GAPDH-211ENST00000619601 KDM2BQ8NHM5 1336 aa14.32□□□□□ -0.12
GAPDH-211ENST00000619601 CFAP44Q96MT7 982 aa14.31□□□□□ -0.12
GAPDH-211ENST00000619601 LAS1LQ9Y4W2 734 aaKnown RBP14.31□□□□□ -0.12
GAPDH-211ENST00000619601 HOXB7P09629 217 aa14.3□□□□□ -0.12
GAPDH-211ENST00000619601 PRELPP51888 382 aa14.3□□□□□ -0.12
GAPDH-211ENST00000619601 NGEFQ8N5V2 710 aa14.3□□□□□ -0.12
GAPDH-211ENST00000619601 NYXQ9GZU5 481 aa14.3□□□□□ -0.12
GAPDH-211ENST00000619601 TIAM2Q8IVF5 1701 aa14.29□□□□□ -0.12
GAPDH-211ENST00000619601 APAF1O14727 1248 aa14.29□□□□□ -0.12
GAPDH-211ENST00000619601 EIF2S2P20042 333 aaKnown RBP14.29□□□□□ -0.12
GAPDH-211ENST00000619601 HLFQ16534 295 aa14.29□□□□□ -0.12
GAPDH-211ENST00000619601 STYK1Q6J9G0 422 aa14.29□□□□□ -0.12
GAPDH-211ENST00000619601 CNKSR1Q969H4 720 aa14.29□□□□□ -0.12
GAPDH-211ENST00000619601 ZNF622Q969S3 477 aaKnown RBP eCLIP14.29□□□□□ -0.12
GAPDH-211ENST00000619601 COL11A2P13942 1736 aaPredicted RBP14.29□□□□□ -0.12
GAPDH-211ENST00000619601 NUP98P52948 1817 aa14.29□□□□□ -0.12
GAPDH-211ENST00000619601 LMNB1P20700 586 aa14.28□□□□□ -0.12
GAPDH-211ENST00000619601 GTF2E1P29083 439 aaPredicted RBP14.28□□□□□ -0.12
GAPDH-211ENST00000619601 FSTL1Q12841 308 aa14.28□□□□□ -0.12
GAPDH-211ENST00000619601 MASTLQ96GX5 879 aa14.28□□□□□ -0.12
GAPDH-211ENST00000619601 CACNA1SQ13698 1873 aa14.27□□□□□ -0.12
GAPDH-211ENST00000619601 IBTKQ9P2D0 1353 aaPredicted RBP14.27□□□□□ -0.12
GAPDH-211ENST00000619601 ZC3H4Q9UPT8 1303 aaKnown RBP14.27□□□□□ -0.12
GAPDH-211ENST00000619601 SRGNP10124 158 aa14.27□□□□□ -0.13
GAPDH-211ENST00000619601 GNAI1P63096 354 aa14.27□□□□□ -0.13
GAPDH-211ENST00000619601 HTRA3P83110 453 aa14.27□□□□□ -0.13
GAPDH-211ENST00000619601 PDIA6Q15084 440 aa14.27□□□□□ -0.13
GAPDH-211ENST00000619601 SOGA3Q5TF21 947 aa14.27□□□□□ -0.13
GAPDH-211ENST00000619601 GIGYF2Q6Y7W6 1299 aaKnown RBP14.27□□□□□ -0.13
GAPDH-211ENST00000619601 TTLL7Q6ZT98 887 aa14.27□□□□□ -0.13
GAPDH-211ENST00000619601 CCDC24Q8N4L8 307 aa14.27□□□□□ -0.13
GAPDH-211ENST00000619601 ZBTB3Q9H5J0 574 aa14.27□□□□□ -0.13
GAPDH-211ENST00000619601 DDX21Q9NR30 783 aaKnown RBP eCLIP14.27□□□□□ -0.13
GAPDH-211ENST00000619601 IFT57Q9NWB7 429 aa14.27□□□□□ -0.13
GAPDH-211ENST00000619601 DICER1Q9UPY3 1922 aaKnown RBP14.27□□□□□ -0.13
GAPDH-211ENST00000619601 FER1L6Q2WGJ9 1857 aa14.27□□□□□ -0.13
GAPDH-211ENST00000619601 KLRG2A4D1S0 409 aaPredicted RBP14.26□□□□□ -0.13
GAPDH-211ENST00000619601 NFKBIEO00221 500 aa14.26□□□□□ -0.13
GAPDH-211ENST00000619601 NPR1P16066 1061 aa14.26□□□□□ -0.13
GAPDH-211ENST00000619601 PARP10Q53GL7 1025 aa14.26□□□□□ -0.13
GAPDH-211ENST00000619601 CHMP4AQ9BY43 222 aa14.26□□□□□ -0.13
GAPDH-211ENST00000619601 GLTPD2A6NH11 291 aa14.25□□□□□ -0.13
GAPDH-211ENST00000619601 ZNF853P0CG23 659 aa14.25□□□□□ -0.13
GAPDH-211ENST00000619601 NCBP3Q53F19 620 aaKnown RBP14.25□□□□□ -0.13
GAPDH-211ENST00000619601 HSP90AB3PQ58FF7 597 aa14.25□□□□□ -0.13
GAPDH-211ENST00000619601 HDGFL1Q5TGJ6 251 aa14.25□□□□□ -0.13
GAPDH-211ENST00000619601 LRP10Q7Z4F1 713 aa14.25□□□□□ -0.13
GAPDH-211ENST00000619601 PPP1R42Q7Z4L9 355 aa14.25□□□□□ -0.13
GAPDH-211ENST00000619601 MRS2Q9HD23 443 aa14.25□□□□□ -0.13
GAPDH-211ENST00000619601 ARFGEF2Q9Y6D5 1785 aa14.24□□□□□ -0.13
GAPDH-211ENST00000619601 FAM177BA6PVY3 158 aa14.24□□□□□ -0.13
GAPDH-211ENST00000619601 CCDC27Q2M243 656 aa14.24□□□□□ -0.13
GAPDH-211ENST00000619601 ZNF34Q8IZ26 560 aa14.24□□□□□ -0.13
GAPDH-211ENST00000619601 MBIPQ9NS73 344 aa14.24□□□□□ -0.13
GAPDH-211ENST00000619601 ZNF219Q9P2Y4 722 aaPredicted RBP14.24□□□□□ -0.13
GAPDH-211ENST00000619601 DBF4Q9UBU7 674 aaPredicted RBP14.24□□□□□ -0.13
GAPDH-211ENST00000619601 SLX4Q8IY92 1834 aa14.24□□□□□ -0.13
GAPDH-211ENST00000619601 RIC1Q4ADV7 1423 aa14.24□□□□□ -0.13
GAPDH-211ENST00000619601 RNF123Q5XPI4 1314 aa14.23□□□□□ -0.13
GAPDH-211ENST00000619601 C21orf2O43822 256 aa14.23□□□□□ -0.13
GAPDH-211ENST00000619601 GPTP24298 496 aa14.23□□□□□ -0.13
GAPDH-211ENST00000619601 ALDH1B1P30837 517 aa14.23□□□□□ -0.13
GAPDH-211ENST00000619601 PROSER3Q2NL68 480 aa14.23□□□□□ -0.13
GAPDH-211ENST00000619601 PRPF40BQ6NWY9 871 aaKnown RBP14.23□□□□□ -0.13
GAPDH-211ENST00000619601 COPS6Q7L5N1 327 aa14.23□□□□□ -0.13
GAPDH-211ENST00000619601 SMC1BQ8NDV3 1235 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms