RNA–Protein interactions for RNA: ENST00000619564.3

FGFR1-241, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 5 BASIC

Gene FGFR1, Length 5,482 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-241ENST00000619564 CHRNA2Q15822 529 aa23.47■■□□□ 1.35
FGFR1-241ENST00000619564 UBE3BQ7Z3V4 1068 aa23.47■■□□□ 1.35
FGFR1-241ENST00000619564 VPS36Q86VN1 386 aa23.47■■□□□ 1.35
FGFR1-241ENST00000619564 CCDC148Q8NFR7 591 aa23.47■■□□□ 1.35
FGFR1-241ENST00000619564 CACNA2D4Q7Z3S7 1137 aa23.46■■□□□ 1.35
FGFR1-241ENST00000619564 DHX29Q7Z478 1369 aaKnown RBP23.46■■□□□ 1.35
FGFR1-241ENST00000619564 CCDC150Q8NCX0 1101 aa23.45■■□□□ 1.34
FGFR1-241ENST00000619564 SYCE3A1L190 88 aa23.45■■□□□ 1.34
FGFR1-241ENST00000619564 CCDC66A2RUB6 948 aa23.45■■□□□ 1.34
FGFR1-241ENST00000619564 TRIM27P14373 513 aa23.45■■□□□ 1.34
FGFR1-241ENST00000619564 NBPF6Q5VWK0 638 aa23.45■■□□□ 1.34
FGFR1-241ENST00000619564 NBPF5PQ86XG9 351 aaPredicted RBP23.45■■□□□ 1.34
FGFR1-241ENST00000619564 NBPF4Q96M43 638 aa23.45■■□□□ 1.34
FGFR1-241ENST00000619564 TSPY2A6NKD2 308 aa23.44■■□□□ 1.34
FGFR1-241ENST00000619564 CCDC152Q4G0S7 254 aa23.44■■□□□ 1.34
FGFR1-241ENST00000619564 ANKRD36BQ8N2N9 1353 aa23.44■■□□□ 1.34
FGFR1-241ENST00000619564 PI4KAP2A4QPH2 592 aa23.44■■□□□ 1.34
FGFR1-241ENST00000619564 PI4KAP1Q8N8J0 262 aa23.44■■□□□ 1.34
FGFR1-241ENST00000619564 KAT14Q9H8E8 782 aa23.44■■□□□ 1.34
FGFR1-241ENST00000619564 UQCRFS1P1P0C7P4 283 aa23.43■■□□□ 1.34
FGFR1-241ENST00000619564 SNRKQ9NRH2 765 aa23.43■■□□□ 1.34
FGFR1-241ENST00000619564 MYO1BO43795 1136 aa23.43■■□□□ 1.34
FGFR1-241ENST00000619564 SFPQP23246 707 aaKnown RBP eCLIP23.43■■□□□ 1.34
FGFR1-241ENST00000619564 GSTO1P78417 241 aa23.43■■□□□ 1.34
FGFR1-241ENST00000619564 TMEM67Q5HYA8 995 aa23.43■■□□□ 1.34
FGFR1-241ENST00000619564 GOLGA6L7A0A1B0GV03 622 aa23.43■■□□□ 1.34
FGFR1-241ENST00000619564 MBIPQ9NS73 344 aa23.43■■□□□ 1.34
FGFR1-241ENST00000619564 MYCNP04198 464 aaPredicted RBP23.42■■□□□ 1.34
FGFR1-241ENST00000619564 CCT2P78371 535 aaKnown RBP23.42■■□□□ 1.34
FGFR1-241ENST00000619564 KIAA0754O94854 1291 aa23.42■■□□□ 1.34
FGFR1-241ENST00000619564 CCDC183Q5T5S1 534 aa23.42■■□□□ 1.34
FGFR1-241ENST00000619564 FAM193AP78312 1265 aa23.42■■□□□ 1.34
FGFR1-241ENST00000619564 MFSD6Q6ZSS7 791 aa23.42■■□□□ 1.34
FGFR1-241ENST00000619564 IARSP41252 1262 aaKnown RBP23.41■■□□□ 1.34
FGFR1-241ENST00000619564 ANKRD13DQ6ZTN6 518 aa23.41■■□□□ 1.34
FGFR1-241ENST00000619564 CTAGE5O15320 804 aa23.41■■□□□ 1.34
FGFR1-241ENST00000619564 CNNM3Q8NE01 707 aa23.41■■□□□ 1.34
FGFR1-241ENST00000619564 TTC21AQ8NDW8 1320 aa23.41■■□□□ 1.34
FGFR1-241ENST00000619564 CALML4Q96GE6 196 aa23.41■■□□□ 1.34
FGFR1-241ENST00000619564 ZCRB1Q8TBF4 217 aaKnown RBP23.41■■□□□ 1.34
FGFR1-241ENST00000619564 C20orf194Q5TEA3 1177 aa23.4■■□□□ 1.34
FGFR1-241ENST00000619564 CRNKL1Q9BZJ0 848 aaKnown RBP23.4■■□□□ 1.34
FGFR1-241ENST00000619564 TCP11L1Q9NUJ3 509 aa23.4■■□□□ 1.34
FGFR1-241ENST00000619564 BRPF3Q9ULD4 1205 aa23.4■■□□□ 1.34
FGFR1-241ENST00000619564 ZSCAN12O43309 604 aa23.4■■□□□ 1.34
FGFR1-241ENST00000619564 TOM1O60784 492 aa23.39■■□□□ 1.34
FGFR1-241ENST00000619564 AMPD3Q01432 767 aa23.39■■□□□ 1.34
FGFR1-241ENST00000619564 USP16Q9Y5T5 823 aa23.39■■□□□ 1.34
FGFR1-241ENST00000619564 IL16Q14005 1332 aa23.39■■□□□ 1.34
FGFR1-241ENST00000619564 NPHP3Q7Z494 1330 aa23.39■■□□□ 1.34
FGFR1-241ENST00000619564 FAM83GA6ND36 823 aa23.39■■□□□ 1.33
FGFR1-241ENST00000619564 NCOA7Q8NI08 942 aa23.39■■□□□ 1.33
FGFR1-241ENST00000619564 VAT1LQ9HCJ6 419 aa23.39■■□□□ 1.33
FGFR1-241ENST00000619564 CETN1Q12798 172 aa23.38■■□□□ 1.33
FGFR1-241ENST00000619564 TOP1P11387 765 aaKnown RBP23.38■■□□□ 1.33
FGFR1-241ENST00000619564 C11orf95C9JLR9 678 aaPredicted RBP23.37■■□□□ 1.33
FGFR1-241ENST00000619564 KIF2AO00139 706 aaPredicted RBP23.37■■□□□ 1.33
FGFR1-241ENST00000619564 ANAPC15P60006 121 aa23.37■■□□□ 1.33
FGFR1-241ENST00000619564 HMG20BQ9P0W2 317 aa23.37■■□□□ 1.33
FGFR1-241ENST00000619564 LIG1P18858 919 aa23.37■■□□□ 1.33
FGFR1-241ENST00000619564 MPHOSPH6Q99547 160 aaKnown RBP23.37■■□□□ 1.33
FGFR1-241ENST00000619564 STXBP4Q6ZWJ1 553 aa23.36■■□□□ 1.33
FGFR1-241ENST00000619564 TMEM87AQ8NBN3 555 aa23.36■■□□□ 1.33
FGFR1-241ENST00000619564 SETDB2Q96T68 719 aa23.36■■□□□ 1.33
FGFR1-241ENST00000619564 METAP2P50579 478 aaKnown RBP eCLIP23.36■■□□□ 1.33
FGFR1-241ENST00000619564 HAND2P61296 217 aa23.36■■□□□ 1.33
FGFR1-241ENST00000619564 NEK1Q96PY6 1258 aa23.36■■□□□ 1.33
FGFR1-241ENST00000619564 PYM1Q9BRP8 204 aaKnown RBP23.36■■□□□ 1.33
FGFR1-241ENST00000619564 ATP6V1AP38606 617 aa23.36■■□□□ 1.33
FGFR1-241ENST00000619564 CCDC144CPQ8IYA2 1237 aa23.36■■□□□ 1.33
FGFR1-241ENST00000619564 UBXN4Q92575 508 aa23.36■■□□□ 1.33
FGFR1-241ENST00000619564 SMARCC1Q92922 1105 aaPredicted RBP23.36■■□□□ 1.33
FGFR1-241ENST00000619564 MICU3Q86XE3 530 aa23.35■■□□□ 1.33
FGFR1-241ENST00000619564 FSIP1Q8NA03 581 aa23.35■■□□□ 1.33
FGFR1-241ENST00000619564 KIF5CO60282 957 aa23.35■■□□□ 1.33
FGFR1-241ENST00000619564 KDM5BQ9UGL1 1544 aa23.35■■□□□ 1.33
FGFR1-241ENST00000619564 UBAP1LF5GYI3 381 aa23.35■■□□□ 1.33
FGFR1-241ENST00000619564 ZGPATQ8N5A5 531 aaKnown RBP23.35■■□□□ 1.33
FGFR1-241ENST00000619564 CCDC102AQ96A19 550 aa23.34■■□□□ 1.33
FGFR1-241ENST00000619564 RBM10P98175 930 aaKnown RBP23.34■■□□□ 1.33
FGFR1-241ENST00000619564 CCDC97Q96F63 343 aaPredicted RBP23.34■■□□□ 1.33
FGFR1-241ENST00000619564 GBP3Q9H0R5 595 aa23.34■■□□□ 1.33
FGFR1-241ENST00000619564 ORC3Q9UBD5 711 aaPredicted RBP23.34■■□□□ 1.33
FGFR1-241ENST00000619564 IDEP14735 1019 aa23.33■■□□□ 1.33
FGFR1-241ENST00000619564 NUP88Q99567 741 aaPredicted RBP23.33■■□□□ 1.33
FGFR1-241ENST00000619564 DDX19AQ9NUU7 478 aaKnown RBP23.33■■□□□ 1.33
FGFR1-241ENST00000619564 HDAC9Q9UKV0 1011 aa23.33■■□□□ 1.33
FGFR1-241ENST00000619564 GJB2P29033 226 aa23.33■■□□□ 1.33
FGFR1-241ENST00000619564 TDRD12Q587J7 1177 aaKnown RBP23.33■■□□□ 1.33
FGFR1-241ENST00000619564 JARID2Q92833 1246 aaPredicted RBP23.33■■□□□ 1.33
FGFR1-241ENST00000619564 SAMM50Q9Y512 469 aa23.33■■□□□ 1.33
FGFR1-241ENST00000619564 USO1O60763 962 aaKnown RBP23.33■■□□□ 1.33
FGFR1-241ENST00000619564 ANXA1P04083 346 aa23.33■■□□□ 1.33
FGFR1-241ENST00000619564 YEATS4O95619 227 aa23.33■■□□□ 1.32
FGFR1-241ENST00000619564 MTIF2P46199 727 aaKnown RBP23.33■■□□□ 1.32
FGFR1-241ENST00000619564 MAP3K1Q13233 1512 aa23.33■■□□□ 1.32
FGFR1-241ENST00000619564 UBA7P41226 1012 aa23.32■■□□□ 1.32
FGFR1-241ENST00000619564 SLC4A8Q2Y0W8 1093 aa23.32■■□□□ 1.32
FGFR1-241ENST00000619564 CCDC178Q5BJE1 867 aa23.32■■□□□ 1.32
FGFR1-241ENST00000619564 TAF3Q5VWG9 929 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms