RNA–Protein interactions for RNA: ENST00000618934.1

PCDHGB3-202, Transcript of protocadherin gamma subfamily B, 3, humanhuman

APPRIS P1 BASIC

Gene PCDHGB3, Length 2,445 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-202ENST00000618934 PDIA6Q15084 440 aa23.3■■□□□ 1.32
PCDHGB3-202ENST00000618934 HSP90AB4PQ58FF6 505 aa23.3■■□□□ 1.32
PCDHGB3-202ENST00000618934 CRYBG1Q9Y4K1 1723 aa23.29■■□□□ 1.32
PCDHGB3-202ENST00000618934 EPB41L2O43491 1005 aaKnown RBP23.29■■□□□ 1.32
PCDHGB3-202ENST00000618934 ZC3H6P61129 1189 aaKnown RBP23.29■■□□□ 1.32
PCDHGB3-202ENST00000618934 RUFY3Q7L099 469 aa23.29■■□□□ 1.32
PCDHGB3-202ENST00000618934 GADD45BO75293 160 aaPredicted RBP23.29■■□□□ 1.32
PCDHGB3-202ENST00000618934 GLRX3O76003 335 aaKnown RBP23.29■■□□□ 1.32
PCDHGB3-202ENST00000618934 KRT28Q7Z3Y7 464 aa23.29■■□□□ 1.32
PCDHGB3-202ENST00000618934 CLASRPQ8N2M8 674 aaKnown RBP23.29■■□□□ 1.32
PCDHGB3-202ENST00000618934 TTC41PQ6P2S7 1318 aa23.28■■□□□ 1.32
PCDHGB3-202ENST00000618934 CHMP4AQ9BY43 222 aa23.28■■□□□ 1.32
PCDHGB3-202ENST00000618934 BICC1Q9H694 974 aaKnown RBP23.28■■□□□ 1.32
PCDHGB3-202ENST00000618934 RPAP1Q9BWH6 1393 aaPredicted RBP23.27■■□□□ 1.32
PCDHGB3-202ENST00000618934 SASH1O94885 1247 aa23.27■■□□□ 1.32
PCDHGB3-202ENST00000618934 SIPA1L3O60292 1781 aaPredicted RBP23.27■■□□□ 1.32
PCDHGB3-202ENST00000618934 LARGE1O95461 756 aa23.27■■□□□ 1.31
PCDHGB3-202ENST00000618934 LRSAM1Q6UWE0 723 aa23.27■■□□□ 1.31
PCDHGB3-202ENST00000618934 DDX54Q8TDD1 881 aaKnown RBP23.27■■□□□ 1.31
PCDHGB3-202ENST00000618934 NAP1L5Q96NT1 182 aaPredicted RBP23.27■■□□□ 1.31
PCDHGB3-202ENST00000618934 ECHDC1Q9NTX5 307 aa23.27■■□□□ 1.31
PCDHGB3-202ENST00000618934 ZNF142P52746 1687 aaPredicted RBP23.26■■□□□ 1.31
PCDHGB3-202ENST00000618934 ADCK5Q3MIX3 580 aa23.26■■□□□ 1.31
PCDHGB3-202ENST00000618934 KIAA1211Q6ZU35 1233 aa23.26■■□□□ 1.31
PCDHGB3-202ENST00000618934 AACSQ86V21 672 aa23.26■■□□□ 1.31
PCDHGB3-202ENST00000618934 GRM8O00222 908 aa23.25■■□□□ 1.31
PCDHGB3-202ENST00000618934 DIAPH3Q9NSV4 1193 aa23.25■■□□□ 1.31
PCDHGB3-202ENST00000618934 HYPKQ9NX55 129 aa23.25■■□□□ 1.31
PCDHGB3-202ENST00000618934 IGKV5-2P06315 115 aa23.25■■□□□ 1.31
PCDHGB3-202ENST00000618934 KLHDC4Q8TBB5 520 aa23.25■■□□□ 1.31
PCDHGB3-202ENST00000618934 NPHP4O75161 1426 aaPredicted RBP23.25■■□□□ 1.31
PCDHGB3-202ENST00000618934 IFIT2P09913 472 aaKnown RBP23.24■■□□□ 1.31
PCDHGB3-202ENST00000618934 CASTP20810 708 aaKnown RBP23.24■■□□□ 1.31
PCDHGB3-202ENST00000618934 COL9A3Q14050 684 aaPredicted RBP23.24■■□□□ 1.31
PCDHGB3-202ENST00000618934 LINS1Q8NG48 757 aa23.24■■□□□ 1.31
PCDHGB3-202ENST00000618934 DDX17Q92841 729 aaKnown RBP23.24■■□□□ 1.31
PCDHGB3-202ENST00000618934 EAF2Q96CJ1 260 aaPredicted RBP23.24■■□□□ 1.31
PCDHGB3-202ENST00000618934 CCDC8Q9H0W5 538 aaPredicted RBP23.24■■□□□ 1.31
PCDHGB3-202ENST00000618934 DDX21Q9NR30 783 aaKnown RBP eCLIP23.24■■□□□ 1.31
PCDHGB3-202ENST00000618934 TLR7Q9NYK1 1049 aaKnown RBP23.24■■□□□ 1.31
PCDHGB3-202ENST00000618934 USP48Q86UV5 1035 aa23.24■■□□□ 1.31
PCDHGB3-202ENST00000618934 TRPM3Q9HCF6 1732 aaPredicted RBP23.24■■□□□ 1.31
PCDHGB3-202ENST00000618934 MYL6BP14649 208 aa23.23■■□□□ 1.31
PCDHGB3-202ENST00000618934 ANP32BQ92688 251 aaKnown RBP23.23■■□□□ 1.31
PCDHGB3-202ENST00000618934 SIL1Q9H173 461 aa23.23■■□□□ 1.31
PCDHGB3-202ENST00000618934 OVOS2A0A0G2JMS6 1433 aa23.23■■□□□ 1.31
PCDHGB3-202ENST00000618934 PRPF40BQ6NWY9 871 aaKnown RBP23.23■■□□□ 1.31
PCDHGB3-202ENST00000618934 ERBB3P21860 1342 aa23.23■■□□□ 1.31
PCDHGB3-202ENST00000618934 MBD3O95983 291 aa23.22■■□□□ 1.31
PCDHGB3-202ENST00000618934 CAMTA1Q9Y6Y1 1673 aa23.22■■□□□ 1.31
PCDHGB3-202ENST00000618934 PIP4K2AP48426 406 aaPredicted RBP23.22■■□□□ 1.31
PCDHGB3-202ENST00000618934 RNF214Q8ND24 703 aa23.22■■□□□ 1.31
PCDHGB3-202ENST00000618934 JARID2Q92833 1246 aaPredicted RBP23.22■■□□□ 1.31
PCDHGB3-202ENST00000618934 FAM227BQ96M60 508 aa23.22■■□□□ 1.31
PCDHGB3-202ENST00000618934 LIMCH1Q9UPQ0 1083 aa23.22■■□□□ 1.31
PCDHGB3-202ENST00000618934 WDR33Q9C0J8 1336 aaKnown RBP23.22■■□□□ 1.31
PCDHGB3-202ENST00000618934 ZNF790Q6PG37 636 aa23.21■■□□□ 1.31
PCDHGB3-202ENST00000618934 NFATC2IPQ8NCF5 419 aa23.21■■□□□ 1.31
PCDHGB3-202ENST00000618934 UTYO14607 1347 aa23.21■■□□□ 1.31
PCDHGB3-202ENST00000618934 TPRNQ4KMQ1 711 aa23.21■■□□□ 1.31
PCDHGB3-202ENST00000618934 EPHA10Q5JZY3 1008 aa23.21■■□□□ 1.31
PCDHGB3-202ENST00000618934 PROSER2Q86WR7 435 aaPredicted RBP23.21■■□□□ 1.31
PCDHGB3-202ENST00000618934 PDLIM2Q96JY6 352 aa23.2■■□□□ 1.3
PCDHGB3-202ENST00000618934 JAKMIP1Q96N16 626 aaKnown RBP23.2■■□□□ 1.3
PCDHGB3-202ENST00000618934 RIC3Q7Z5B4 369 aa23.2■■□□□ 1.3
PCDHGB3-202ENST00000618934 CNPY2Q9Y2B0 182 aa23.2■■□□□ 1.3
PCDHGB3-202ENST00000618934 KDM6AO15550 1401 aaPredicted RBP23.2■■□□□ 1.3
PCDHGB3-202ENST00000618934 C5P01031 1676 aa23.19■■□□□ 1.3
PCDHGB3-202ENST00000618934 SYT1P21579 422 aa23.19■■□□□ 1.3
PCDHGB3-202ENST00000618934 ERC1Q8IUD2 1116 aa23.19■■□□□ 1.3
PCDHGB3-202ENST00000618934 NLRP2Q9NX02 1062 aa23.19■■□□□ 1.3
PCDHGB3-202ENST00000618934 ZSCAN30Q86W11 494 aa23.19■■□□□ 1.3
PCDHGB3-202ENST00000618934 XAGE3Q8WTP9 111 aa23.19■■□□□ 1.3
PCDHGB3-202ENST00000618934 G3BP1Q13283 466 aaKnown RBP eCLIP23.18■■□□□ 1.3
PCDHGB3-202ENST00000618934 EVI5LQ96CN4 794 aa23.18■■□□□ 1.3
PCDHGB3-202ENST00000618934 ADAMTS7Q9UKP4 1686 aa23.18■■□□□ 1.3
PCDHGB3-202ENST00000618934 NMIQ13287 307 aaPredicted RBP23.18■■□□□ 1.3
PCDHGB3-202ENST00000618934 NECTIN1Q15223 517 aa23.18■■□□□ 1.3
PCDHGB3-202ENST00000618934 CCDC83Q8IWF9 413 aa23.18■■□□□ 1.3
PCDHGB3-202ENST00000618934 RUFY2Q8WXA3 655 aa23.18■■□□□ 1.3
PCDHGB3-202ENST00000618934 BOLA2Q9H3K6 86 aa23.18■■□□□ 1.3
PCDHGB3-202ENST00000618934 SLC52A2Q9HAB3 445 aa23.18■■□□□ 1.3
PCDHGB3-202ENST00000618934 C1orf167Q5SNV9 1468 aa23.17■■□□□ 1.3
PCDHGB3-202ENST00000618934 DDX58O95786 925 aaKnown RBP23.17■■□□□ 1.3
PCDHGB3-202ENST00000618934 ZSCAN22P10073 491 aaPredicted RBP23.17■■□□□ 1.3
PCDHGB3-202ENST00000618934 ST3GAL1Q11201 340 aa23.17■■□□□ 1.3
PCDHGB3-202ENST00000618934 COPS6Q7L5N1 327 aa23.17■■□□□ 1.3
PCDHGB3-202ENST00000618934 GPATCH3Q96I76 525 aa23.17■■□□□ 1.3
PCDHGB3-202ENST00000618934 ZNF496Q96IT1 587 aaPredicted RBP23.17■■□□□ 1.3
PCDHGB3-202ENST00000618934 NPHP3Q7Z494 1330 aa23.17■■□□□ 1.3
PCDHGB3-202ENST00000618934 NEURL1BA8MQ27 555 aa23.17■■□□□ 1.3
PCDHGB3-202ENST00000618934 PDRG1Q9NUG6 133 aa23.17■■□□□ 1.3
PCDHGB3-202ENST00000618934 STX6O43752 255 aa23.16■■□□□ 1.3
PCDHGB3-202ENST00000618934 CABLES1Q8TDN4 633 aa23.16■■□□□ 1.3
PCDHGB3-202ENST00000618934 RAPGEF4Q8WZA2 1011 aa23.16■■□□□ 1.3
PCDHGB3-202ENST00000618934 KCNB2Q92953 911 aa23.16■■□□□ 1.3
PCDHGB3-202ENST00000618934 MYD88Q99836 296 aa23.16■■□□□ 1.3
PCDHGB3-202ENST00000618934 EIF2AK3Q9NZJ5 1116 aaKnown RBP23.16■■□□□ 1.3
PCDHGB3-202ENST00000618934 USP16Q9Y5T5 823 aa23.16■■□□□ 1.3
PCDHGB3-202ENST00000618934 CCDC171Q6TFL3 1326 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms