RNA–Protein interactions for RNA: ENST00000618441.5

MATR3-227, Transcript of matrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MATR3, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-227ENST00000618441 RPAINQ86UA6 219 aa14.38□□□□□ -0.11
MATR3-227ENST00000618441 THUMPD2Q9BTF0 503 aaKnown RBP14.38□□□□□ -0.11
MATR3-227ENST00000618441 STX6O43752 255 aa14.38□□□□□ -0.11
MATR3-227ENST00000618441 NRDCO43847 1150 aa14.38□□□□□ -0.11
MATR3-227ENST00000618441 PRPF38AQ8NAV1 312 aaKnown RBP14.38□□□□□ -0.11
MATR3-227ENST00000618441 UGGT1Q9NYU2 1555 aa14.37□□□□□ -0.11
MATR3-227ENST00000618441 CCDC171Q6TFL3 1326 aa14.37□□□□□ -0.11
MATR3-227ENST00000618441 EIF3CLB5ME19 914 aaKnown RBP14.37□□□□□ -0.11
MATR3-227ENST00000618441 ZRSR1Q15695 479 aaKnown RBP14.37□□□□□ -0.11
MATR3-227ENST00000618441 GIMAP7Q8NHV1 300 aa14.37□□□□□ -0.11
MATR3-227ENST00000618441 EIF3CQ99613 913 aaKnown RBP14.37□□□□□ -0.11
MATR3-227ENST00000618441 VIRMAQ69YN4 1812 aaKnown RBP14.37□□□□□ -0.11
MATR3-227ENST00000618441 SMC2O95347 1197 aa14.37□□□□□ -0.11
MATR3-227ENST00000618441 MAP4K4O95819 1239 aaPredicted RBP14.37□□□□□ -0.11
MATR3-227ENST00000618441 ATP2B1P20020 1258 aa14.37□□□□□ -0.11
MATR3-227ENST00000618441 CCDC83Q8IWF9 413 aa14.37□□□□□ -0.11
MATR3-227ENST00000618441 FBXO18Q8NFZ0 1043 aa14.37□□□□□ -0.11
MATR3-227ENST00000618441 ZSCAN22P10073 491 aaPredicted RBP14.37□□□□□ -0.11
MATR3-227ENST00000618441 BIRC2Q13490 618 aa14.37□□□□□ -0.11
MATR3-227ENST00000618441 RNF20Q5VTR2 975 aa14.37□□□□□ -0.11
MATR3-227ENST00000618441 LRCH2Q5VUJ6 765 aa14.37□□□□□ -0.11
MATR3-227ENST00000618441 CREBRFQ8IUR6 639 aa14.37□□□□□ -0.11
MATR3-227ENST00000618441 YEATS2Q9ULM3 1422 aa14.36□□□□□ -0.11
MATR3-227ENST00000618441 GOLGA5Q8TBA6 731 aa14.36□□□□□ -0.11
MATR3-227ENST00000618441 H0YHG0 523 aa14.36□□□□□ -0.11
MATR3-227ENST00000618441 CPA1P15085 419 aa14.36□□□□□ -0.11
MATR3-227ENST00000618441 SLC12A5Q9H2X9 1139 aa14.36□□□□□ -0.11
MATR3-227ENST00000618441 CABP2Q9NPB3 220 aa14.36□□□□□ -0.11
MATR3-227ENST00000618441 ADAM21Q9UKJ8 722 aa14.36□□□□□ -0.11
MATR3-227ENST00000618441 PLA2R1Q13018 1463 aa14.36□□□□□ -0.11
MATR3-227ENST00000618441 MAGI2Q86UL8 1455 aa14.36□□□□□ -0.11
MATR3-227ENST00000618441 PREX2Q70Z35 1606 aa14.36□□□□□ -0.11
MATR3-227ENST00000618441 LIG1P18858 919 aa14.35□□□□□ -0.11
MATR3-227ENST00000618441 LIG3P49916 1009 aa14.35□□□□□ -0.11
MATR3-227ENST00000618441 RAI14Q9P0K7 980 aa14.35□□□□□ -0.11
MATR3-227ENST00000618441 MYO5CQ9NQX4 1742 aa14.35□□□□□ -0.11
MATR3-227ENST00000618441 SYT1P21579 422 aa14.35□□□□□ -0.11
MATR3-227ENST00000618441 MCM2P49736 904 aa14.35□□□□□ -0.11
MATR3-227ENST00000618441 EVCP57679 992 aa14.35□□□□□ -0.11
MATR3-227ENST00000618441 HSP90AB4PQ58FF6 505 aa14.35□□□□□ -0.11
MATR3-227ENST00000618441 SHROOM2Q13796 1616 aa14.34□□□□□ -0.11
MATR3-227ENST00000618441 SLC4A10Q6U841 1118 aa14.34□□□□□ -0.11
MATR3-227ENST00000618441 LRRC8AQ8IWT6 810 aa14.34□□□□□ -0.11
MATR3-227ENST00000618441 CENPHQ9H3R5 247 aa14.34□□□□□ -0.11
MATR3-227ENST00000618441 ACTN2P35609 894 aa14.34□□□□□ -0.11
MATR3-227ENST00000618441 TMCO4Q5TGY1 634 aa14.34□□□□□ -0.11
MATR3-227ENST00000618441 A2MP01023 1474 aa14.34□□□□□ -0.11
MATR3-227ENST00000618441 SHANK2Q9UPX8 1470 aa14.34□□□□□ -0.11
MATR3-227ENST00000618441 RBM33Q96EV2 1170 aaKnown RBP14.34□□□□□ -0.11
MATR3-227ENST00000618441 ARFGAP3Q9NP61 516 aa14.34□□□□□ -0.11
MATR3-227ENST00000618441 NEBLO76041 1014 aa14.33□□□□□ -0.11
MATR3-227ENST00000618441 HSP90B2PQ58FF3 399 aa14.33□□□□□ -0.11
MATR3-227ENST00000618441 RBM26Q5T8P6 1007 aaKnown RBP14.33□□□□□ -0.11
MATR3-227ENST00000618441 PPM1EQ8WY54 764 aa14.33□□□□□ -0.11
MATR3-227ENST00000618441 ERCC4Q92889 916 aaPredicted RBP14.33□□□□□ -0.11
MATR3-227ENST00000618441 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.33□□□□□ -0.113e-9■■□□□ 13.2
MATR3-227ENST00000618441 MRVI1Q9Y6F6 885 aa14.33□□□□□ -0.11
MATR3-227ENST00000618441 POLR1AO95602 1720 aaPredicted RBP14.33□□□□□ -0.11
MATR3-227ENST00000618441 MAGEA9P43362 315 aa14.33□□□□□ -0.12
MATR3-227ENST00000618441 CARD14Q9BXL6 1004 aa14.33□□□□□ -0.12
MATR3-227ENST00000618441 PTPRCP08575 1304 aa14.33□□□□□ -0.12
MATR3-227ENST00000618441 FRMD3A2A2Y4 597 aa14.33□□□□□ -0.12
MATR3-227ENST00000618441 MUM1L1Q5H9M0 696 aa14.33□□□□□ -0.12
MATR3-227ENST00000618441 SIRT2Q8IXJ6 389 aa14.33□□□□□ -0.12
MATR3-227ENST00000618441 CARD10Q9BWT7 1032 aa14.33□□□□□ -0.12
MATR3-227ENST00000618441 F13A1P00488 732 aa14.32□□□□□ -0.12
MATR3-227ENST00000618441 TSPOAP1O95153 1857 aa14.32□□□□□ -0.12
MATR3-227ENST00000618441 ZBTB7BO15156 539 aaPredicted RBP14.32□□□□□ -0.12
MATR3-227ENST00000618441 IVLP07476 585 aa14.32□□□□□ -0.12
MATR3-227ENST00000618441 MCTP2Q6DN12 878 aa14.32□□□□□ -0.12
MATR3-227ENST00000618441 SATB1Q01826 763 aa14.31□□□□□ -0.12
MATR3-227ENST00000618441 RAD50Q92878 1312 aa14.31□□□□□ -0.12
MATR3-227ENST00000618441 UHRF1BP1LA0JNW5 1464 aa14.31□□□□□ -0.12
MATR3-227ENST00000618441 COL17A1Q9UMD9 1497 aaPredicted RBP14.31□□□□□ -0.12
MATR3-227ENST00000618441 DUOX2Q9NRD8 1548 aa14.31□□□□□ -0.12
MATR3-227ENST00000618441 KIF2AO00139 706 aaPredicted RBP14.31□□□□□ -0.12
MATR3-227ENST00000618441 TMC6Q7Z403 805 aa14.31□□□□□ -0.12
MATR3-227ENST00000618441 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.31□□□□□ -0.124e-7■■■□□ 14.8
MATR3-227ENST00000618441 RNF217Q8TC41 542 aa14.31□□□□□ -0.12
MATR3-227ENST00000618441 UHRF1BP1Q6BDS2 1440 aa14.3□□□□□ -0.12
MATR3-227ENST00000618441 PEX14O75381 377 aa14.3□□□□□ -0.12
MATR3-227ENST00000618441 NECAB1Q8N987 351 aa14.3□□□□□ -0.12
MATR3-227ENST00000618441 SCP2P22307 547 aa14.3□□□□□ -0.12
MATR3-227ENST00000618441 GJB2P29033 226 aa14.3□□□□□ -0.12
MATR3-227ENST00000618441 RDXP35241 583 aaKnown RBP14.3□□□□□ -0.12
MATR3-227ENST00000618441 TMPOP42166 694 aaKnown RBP14.3□□□□□ -0.12
MATR3-227ENST00000618441 ATP2B2Q01814 1243 aa14.3□□□□□ -0.12
MATR3-227ENST00000618441 CALR3Q96L12 384 aaKnown RBP14.3□□□□□ -0.12
MATR3-227ENST00000618441 JPH2Q9BR39 696 aaPredicted RBP14.3□□□□□ -0.12
MATR3-227ENST00000618441 NOS1P29475 1434 aa14.3□□□□□ -0.12
MATR3-227ENST00000618441 PDE11AQ9HCR9 933 aa14.3□□□□□ -0.12
MATR3-227ENST00000618441 ABCC1P33527 1531 aa14.29□□□□□ -0.12
MATR3-227ENST00000618441 ATP7AQ04656 1500 aa14.29□□□□□ -0.12
MATR3-227ENST00000618441 PPIP5K1Q6PFW1 1433 aa14.29□□□□□ -0.12
MATR3-227ENST00000618441 KRT85P78386 507 aa14.29□□□□□ -0.12
MATR3-227ENST00000618441 TTC19Q6DKK2 380 aaPredicted RBP14.29□□□□□ -0.12
MATR3-227ENST00000618441 WAPLQ7Z5K2 1190 aa14.29□□□□□ -0.12
MATR3-227ENST00000618441 ZNF853P0CG23 659 aa14.29□□□□□ -0.12
MATR3-227ENST00000618441 FBLN1P23142 703 aa14.29□□□□□ -0.12
MATR3-227ENST00000618441 PTPN21Q16825 1174 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms