RNA–Protein interactions for RNA: ENST00000618148.1

VPS45-213, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,670 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-213ENST00000618148 USP16Q9Y5T5 823 aa9.57□□□□□ -0.88
VPS45-213ENST00000618148 PTPRCP08575 1304 aa9.57□□□□□ -0.88
VPS45-213ENST00000618148 ZKSCAN2Q63HK3 967 aa9.56□□□□□ -0.88
VPS45-213ENST00000618148 SGIP1Q9BQI5 828 aa9.56□□□□□ -0.88
VPS45-213ENST00000618148 CHPF2Q9P2E5 772 aa9.56□□□□□ -0.88
VPS45-213ENST00000618148 IPO8O15397 1037 aaKnown RBP9.55□□□□□ -0.88
VPS45-213ENST00000618148 ST18O60284 1047 aa9.55□□□□□ -0.88
VPS45-213ENST00000618148 CYP19A1P11511 503 aaPredicted RBP9.55□□□□□ -0.88
VPS45-213ENST00000618148 TRIM27P14373 513 aa9.55□□□□□ -0.88
VPS45-213ENST00000618148 ATF7IPQ6VMQ6 1270 aa9.55□□□□□ -0.88
VPS45-213ENST00000618148 DNAJC10Q8IXB1 793 aa9.55□□□□□ -0.88
VPS45-213ENST00000618148 SLAIN1Q8ND83 568 aa9.55□□□□□ -0.88
VPS45-213ENST00000618148 HYPKQ9NX55 129 aa9.55□□□□□ -0.88
VPS45-213ENST00000618148 NOB1Q9ULX3 412 aaKnown RBP9.55□□□□□ -0.88
VPS45-213ENST00000618148 ABCC4O15439 1325 aa9.55□□□□□ -0.88
VPS45-213ENST00000618148 PXDNLA1KZ92 1463 aa9.55□□□□□ -0.88
VPS45-213ENST00000618148 N4BP2Q86UW6 1770 aaPredicted RBP9.55□□□□□ -0.88
VPS45-213ENST00000618148 NBPF26B4DH59 902 aa9.55□□□□□ -0.88
VPS45-213ENST00000618148 TCERG1O14776 1098 aaKnown RBP9.55□□□□□ -0.88
VPS45-213ENST00000618148 STARD3NLO95772 234 aa9.55□□□□□ -0.88
VPS45-213ENST00000618148 EIF2S2P20042 333 aaKnown RBP9.55□□□□□ -0.88
VPS45-213ENST00000618148 FLIIQ13045 1269 aa9.55□□□□□ -0.88
VPS45-213ENST00000618148 ITPK1Q13572 414 aa9.55□□□□□ -0.88
VPS45-213ENST00000618148 PROSER3Q2NL68 480 aa9.55□□□□□ -0.88
VPS45-213ENST00000618148 NBPF14Q5TI25 921 aa9.55□□□□□ -0.88
VPS45-213ENST00000618148 NBPF10Q6P3W6 841 aaKnown RBP9.55□□□□□ -0.88
VPS45-213ENST00000618148 G2E3Q7L622 706 aa9.55□□□□□ -0.88
VPS45-213ENST00000618148 NBPF15Q8N660 670 aa9.55□□□□□ -0.88
VPS45-213ENST00000618148 IBTKQ9P2D0 1353 aaPredicted RBP9.54□□□□□ -0.88
VPS45-213ENST00000618148 PLSCR1O15162 318 aa9.54□□□□□ -0.88
VPS45-213ENST00000618148 PLIN1O60240 522 aa9.54□□□□□ -0.88
VPS45-213ENST00000618148 TRIM37O94972 964 aa9.54□□□□□ -0.88
VPS45-213ENST00000618148 MS4A1P11836 297 aa9.54□□□□□ -0.88
VPS45-213ENST00000618148 C20orf194Q5TEA3 1177 aa9.54□□□□□ -0.88
VPS45-213ENST00000618148 RASEFQ8IZ41 740 aa9.54□□□□□ -0.88
VPS45-213ENST00000618148 API5Q9BZZ5 524 aaKnown RBP9.54□□□□□ -0.88
VPS45-213ENST00000618148 CNTNAP4Q9C0A0 1308 aa9.54□□□□□ -0.88
VPS45-213ENST00000618148 RLBP1P12271 317 aa9.53□□□□□ -0.88
VPS45-213ENST00000618148 SLC27A3Q5K4L6 730 aa9.53□□□□□ -0.88
VPS45-213ENST00000618148 ERICH6BQ5W0A0 696 aa9.53□□□□□ -0.88
VPS45-213ENST00000618148 NECTIN2Q92692 538 aa9.53□□□□□ -0.88
VPS45-213ENST00000618148 FRAT1Q92837 279 aaPredicted RBP9.53□□□□□ -0.88
VPS45-213ENST00000618148 TAF1LQ8IZX4 1826 aa9.53□□□□□ -0.88
VPS45-213ENST00000618148 MYH14Q7Z406 1995 aaKnown RBP9.53□□□□□ -0.88
VPS45-213ENST00000618148 ATP6V1AP38606 617 aa9.52□□□□□ -0.89
VPS45-213ENST00000618148 RC3H1Q5TC82 1133 aaKnown RBP9.52□□□□□ -0.89
VPS45-213ENST00000618148 INTS5Q6P9B9 1019 aaKnown RBP9.52□□□□□ -0.89
VPS45-213ENST00000618148 DZIP1LQ8IYY4 767 aaKnown RBP9.52□□□□□ -0.89
VPS45-213ENST00000618148 PHAXQ9H814 394 aaKnown RBP9.52□□□□□ -0.89
VPS45-213ENST00000618148 ADCY9O60503 1353 aa9.52□□□□□ -0.89
VPS45-213ENST00000618148 ANXA1P04083 346 aa9.51□□□□□ -0.89
VPS45-213ENST00000618148 A1BGP04217 495 aa9.51□□□□□ -0.89
VPS45-213ENST00000618148 CRKLP46109 303 aaKnown RBP9.51□□□□□ -0.89
VPS45-213ENST00000618148 CCDC87Q9NVE4 849 aa9.51□□□□□ -0.89
VPS45-213ENST00000618148 TNNQ9UQP3 1299 aa9.51□□□□□ -0.89
VPS45-213ENST00000618148 ATP10DQ9P241 1426 aa9.51□□□□□ -0.89
VPS45-213ENST00000618148 C4BP0C0L5 1744 aa9.51□□□□□ -0.89
VPS45-213ENST00000618148 NEFLP07196 543 aa9.51□□□□□ -0.89
VPS45-213ENST00000618148 HMGB2P26583 209 aaKnown RBP9.51□□□□□ -0.89
VPS45-213ENST00000618148 CANXP27824 592 aaKnown RBP9.51□□□□□ -0.89
VPS45-213ENST00000618148 IL6STP40189 918 aaPredicted RBP9.51□□□□□ -0.89
VPS45-213ENST00000618148 INTS3Q68E01 1043 aaKnown RBP9.51□□□□□ -0.89
VPS45-213ENST00000618148 LINC00116Q8NCU8 138 aa9.51□□□□□ -0.89
VPS45-213ENST00000618148 PANK1Q8TE04 598 aa9.51□□□□□ -0.89
VPS45-213ENST00000618148 CCNL1Q9UK58 526 aaPredicted RBP9.51□□□□□ -0.89
VPS45-213ENST00000618148 ZBTB1Q9Y2K1 713 aa9.51□□□□□ -0.89
VPS45-213ENST00000618148 NUP188Q5SRE5 1749 aa9.5□□□□□ -0.89
VPS45-213ENST00000618148 EIF5P55010 431 aaKnown RBP9.5□□□□□ -0.89
VPS45-213ENST00000618148 FKBP5Q13451 457 aaPredicted RBP9.5□□□□□ -0.89
VPS45-213ENST00000618148 MVPQ14764 893 aaKnown RBP9.5□□□□□ -0.89
VPS45-213ENST00000618148 KSR2Q6VAB6 950 aa9.5□□□□□ -0.89
VPS45-213ENST00000618148 XAGE3Q8WTP9 111 aa9.5□□□□□ -0.89
VPS45-213ENST00000618148 LRRC4BQ9NT99 713 aa9.5□□□□□ -0.89
VPS45-213ENST00000618148 RGL2O15211 777 aa9.49□□□□□ -0.89
VPS45-213ENST00000618148 DDX58O95786 925 aaKnown RBP9.49□□□□□ -0.89
VPS45-213ENST00000618148 MYL6BP14649 208 aa9.49□□□□□ -0.89
VPS45-213ENST00000618148 MMRN1Q13201 1228 aa9.49□□□□□ -0.89
VPS45-213ENST00000618148 AAMPQ13685 434 aa9.49□□□□□ -0.89
VPS45-213ENST00000618148 COPS6Q7L5N1 327 aa9.49□□□□□ -0.89
VPS45-213ENST00000618148 FTSJ3Q8IY81 847 aaKnown RBP9.49□□□□□ -0.89
VPS45-213ENST00000618148 TMEM57Q8N5G2 664 aa9.49□□□□□ -0.89
VPS45-213ENST00000618148 ARFGEF2Q9Y6D5 1785 aa9.49□□□□□ -0.89
VPS45-213ENST00000618148 PI4KAP2A4QPH2 592 aa9.48□□□□□ -0.89
VPS45-213ENST00000618148 PIP4K2AP48426 406 aaPredicted RBP9.48□□□□□ -0.89
VPS45-213ENST00000618148 CCT4P50991 539 aaKnown RBP9.48□□□□□ -0.89
VPS45-213ENST00000618148 TXNRD1Q16881 649 aa9.48□□□□□ -0.89
VPS45-213ENST00000618148 PI4KAP1Q8N8J0 262 aa9.48□□□□□ -0.89
VPS45-213ENST00000618148 PLBD2Q8NHP8 589 aa9.48□□□□□ -0.89
VPS45-213ENST00000618148 DNAAF4Q8WXU2 420 aa9.48□□□□□ -0.89
VPS45-213ENST00000618148 CLUAP1Q96AJ1 413 aa9.48□□□□□ -0.89
VPS45-213ENST00000618148 CRBNQ96SW2 442 aa9.48□□□□□ -0.89
VPS45-213ENST00000618148 PCDHB13Q9Y5F0 798 aa9.48□□□□□ -0.89
VPS45-213ENST00000618148 F6X3S4 739 aa9.48□□□□□ -0.89
VPS45-213ENST00000618148 APBA3O96018 575 aa9.48□□□□□ -0.89
VPS45-213ENST00000618148 FKBP8Q14318 412 aa9.48□□□□□ -0.89
VPS45-213ENST00000618148 BEND3Q5T5X7 828 aa9.48□□□□□ -0.89
VPS45-213ENST00000618148 TTLL7Q6ZT98 887 aa9.48□□□□□ -0.89
VPS45-213ENST00000618148 ANKRD13DQ6ZTN6 518 aa9.48□□□□□ -0.89
VPS45-213ENST00000618148 SPNS2Q8IVW8 549 aa9.48□□□□□ -0.89
VPS45-213ENST00000618148 TMEM121BQ9BXQ6 578 aaPredicted RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms