RNA–Protein interactions for RNA: ENST00000617270.4

RFX3-212, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFX3, Length 9,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-212ENST00000617270 STX1AQ16623 288 aa6.9□□□□□ -1.31
RFX3-212ENST00000617270 CCDC174Q6PII3 467 aa6.9□□□□□ -1.31
RFX3-212ENST00000617270 PROSER2Q86WR7 435 aaPredicted RBP6.9□□□□□ -1.31
RFX3-212ENST00000617270 SELENOSQ9BQE4 189 aa6.9□□□□□ -1.31
RFX3-212ENST00000617270 SSRP1Q08945 709 aaKnown RBP6.9□□□□□ -1.31
RFX3-212ENST00000617270 CAVIN4Q5BKX8 364 aa6.9□□□□□ -1.31
RFX3-212ENST00000617270 DYNC1I1O14576 645 aa6.89□□□□□ -1.31
RFX3-212ENST00000617270 PNISRQ8TF01 805 aaKnown RBP6.89□□□□□ -1.31
RFX3-212ENST00000617270 CALML4Q96GE6 196 aa6.89□□□□□ -1.31
RFX3-212ENST00000617270 SMIM23A6NLE4 172 aa6.89□□□□□ -1.31
RFX3-212ENST00000617270 SMARCA5O60264 1052 aaPredicted RBP6.89□□□□□ -1.31
RFX3-212ENST00000617270 TBCAO75347 108 aaKnown RBP6.89□□□□□ -1.31
RFX3-212ENST00000617270 CCT2P78371 535 aaKnown RBP6.89□□□□□ -1.31
RFX3-212ENST00000617270 DDX46Q7L014 1031 aaKnown RBP6.89□□□□□ -1.31
RFX3-212ENST00000617270 FAM114A1Q8IWE2 563 aa6.89□□□□□ -1.31
RFX3-212ENST00000617270 ANKS4BQ8N8V4 417 aa6.89□□□□□ -1.31
RFX3-212ENST00000617270 GSTA5Q7RTV2 222 aa6.89□□□□□ -1.31
RFX3-212ENST00000617270 RAB11FIP4Q86YS3 637 aa6.89□□□□□ -1.31
RFX3-212ENST00000617270 GSDMDP57764 484 aa6.89□□□□□ -1.31
RFX3-212ENST00000617270 TMCO4Q5TGY1 634 aa6.89□□□□□ -1.31
RFX3-212ENST00000617270 CEP135Q66GS9 1140 aa6.89□□□□□ -1.31
RFX3-212ENST00000617270 EHBP1Q8NDI1 1231 aa6.89□□□□□ -1.31
RFX3-212ENST00000617270 LARP6Q9BRS8 491 aaKnown RBP6.89□□□□□ -1.31
RFX3-212ENST00000617270 RASAL2Q9UJF2 1139 aa6.89□□□□□ -1.31
RFX3-212ENST00000617270 BAG4O95429 457 aaKnown RBP6.89□□□□□ -1.31
RFX3-212ENST00000617270 WDR66Q8TBY9 1149 aa6.89□□□□□ -1.31
RFX3-212ENST00000617270 TRIM47Q96LD4 638 aa6.89□□□□□ -1.31
RFX3-212ENST00000617270 CWC25Q9NXE8 425 aaPredicted RBP6.89□□□□□ -1.31
RFX3-212ENST00000617270 ADCY5O95622 1261 aa6.88□□□□□ -1.31
RFX3-212ENST00000617270 NAA25Q14CX7 972 aa6.88□□□□□ -1.31
RFX3-212ENST00000617270 CCDC121Q6ZUS5 278 aa6.88□□□□□ -1.31
RFX3-212ENST00000617270 BOLA2Q9H3K6 86 aa6.88□□□□□ -1.31
RFX3-212ENST00000617270 TCP11L1Q9NUJ3 509 aa6.88□□□□□ -1.31
RFX3-212ENST00000617270 DPH6Q7L8W6 267 aa6.88□□□□□ -1.31
RFX3-212ENST00000617270 ODF2LQ9ULJ1 636 aa6.88□□□□□ -1.31
RFX3-212ENST00000617270 MRVI1Q9Y6F6 885 aa6.88□□□□□ -1.31
RFX3-212ENST00000617270 TTC21AQ8NDW8 1320 aa6.88□□□□□ -1.31
RFX3-212ENST00000617270 A0A087WZG4 1122 aa6.88□□□□□ -1.31
RFX3-212ENST00000617270 TTC36A6NLP5 189 aa6.88□□□□□ -1.31
RFX3-212ENST00000617270 NEMFO60524 1076 aa6.88□□□□□ -1.31
RFX3-212ENST00000617270 HSP90AA4PQ58FG1 418 aa6.88□□□□□ -1.31
RFX3-212ENST00000617270 CCDC50Q8IVM0 306 aa6.88□□□□□ -1.31
RFX3-212ENST00000617270 ZNF444Q8N0Y2 327 aaPredicted RBP6.88□□□□□ -1.31
RFX3-212ENST00000617270 MIPOL1Q8TD10 442 aa6.88□□□□□ -1.31
RFX3-212ENST00000617270 DDX12PQ92771 950 aa6.88□□□□□ -1.31
RFX3-212ENST00000617270 LRRC45Q96CN5 670 aa6.88□□□□□ -1.31
RFX3-212ENST00000617270 GDPD2Q9HCC8 539 aa6.88□□□□□ -1.31
RFX3-212ENST00000617270 VAT1LQ9HCJ6 419 aa6.88□□□□□ -1.31
RFX3-212ENST00000617270 C11orf95C9JLR9 678 aaPredicted RBP6.88□□□□□ -1.31
RFX3-212ENST00000617270 EEF2P13639 858 aaKnown RBP6.88□□□□□ -1.31
RFX3-212ENST00000617270 SSFA2P28290 1259 aa6.88□□□□□ -1.31
RFX3-212ENST00000617270 IQCA1Q86XH1 822 aa6.88□□□□□ -1.31
RFX3-212ENST00000617270 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.88□□□□□ -1.31
RFX3-212ENST00000617270 V9GYY5 206 aaPredicted RBP6.88□□□□□ -1.31
RFX3-212ENST00000617270 KIF3CO14782 793 aa6.88□□□□□ -1.31
RFX3-212ENST00000617270 SLU7O95391 586 aaKnown RBP6.88□□□□□ -1.31
RFX3-212ENST00000617270 CYB5RLQ6IPT4 315 aa6.88□□□□□ -1.31
RFX3-212ENST00000617270 PRDM11Q9NQV5 511 aa6.88□□□□□ -1.31
RFX3-212ENST00000617270 PDIA4P13667 645 aaKnown RBP6.88□□□□□ -1.31
RFX3-212ENST00000617270 MCM6Q14566 821 aa6.88□□□□□ -1.31
RFX3-212ENST00000617270 STXBP4Q6ZWJ1 553 aa6.88□□□□□ -1.31
RFX3-212ENST00000617270 TBC1D5Q92609 795 aa6.88□□□□□ -1.31
RFX3-212ENST00000617270 SPAG5Q96R06 1193 aa6.88□□□□□ -1.31
RFX3-212ENST00000617270 PFDN4Q9NQP4 134 aa6.88□□□□□ -1.31
RFX3-212ENST00000617270 MKRN1Q9UHC7 482 aaKnown RBP6.88□□□□□ -1.31
RFX3-212ENST00000617270 TMEM110-MUSTN1A8MSY1 372 aa6.88□□□□□ -1.31
RFX3-212ENST00000617270 RAB11FIP3O75154 756 aa6.88□□□□□ -1.31
RFX3-212ENST00000617270 CATIPQ7Z7H3 387 aa6.88□□□□□ -1.31
RFX3-212ENST00000617270 MICALL1Q8N3F8 863 aa6.88□□□□□ -1.31
RFX3-212ENST00000617270 MIS18AQ9NYP9 233 aa6.88□□□□□ -1.31
RFX3-212ENST00000617270 CCDC171Q6TFL3 1326 aa6.88□□□□□ -1.31
RFX3-212ENST00000617270 N4BP3O15049 544 aa6.87□□□□□ -1.31
RFX3-212ENST00000617270 AMPD3Q01432 767 aa6.87□□□□□ -1.31
RFX3-212ENST00000617270 TTC14Q96N46 770 aa6.87□□□□□ -1.31
RFX3-212ENST00000617270 SH2B1Q9NRF2 756 aaPredicted RBP6.87□□□□□ -1.31
RFX3-212ENST00000617270 GOLGA6L9A6NEM1 432 aa6.87□□□□□ -1.31
RFX3-212ENST00000617270 IFIT3O14879 490 aaKnown RBP6.87□□□□□ -1.31
RFX3-212ENST00000617270 IFIT1P09914 478 aaKnown RBP6.87□□□□□ -1.31
RFX3-212ENST00000617270 CFAP157Q5JU67 520 aa6.87□□□□□ -1.31
RFX3-212ENST00000617270 PRAM1Q96QH2 718 aa6.87□□□□□ -1.31
RFX3-212ENST00000617270 PLVAPQ9BX97 442 aa6.87□□□□□ -1.31
RFX3-212ENST00000617270 EXOC1Q9NV70 894 aa6.87□□□□□ -1.31
RFX3-212ENST00000617270 CTAGE5O15320 804 aa6.87□□□□□ -1.31
RFX3-212ENST00000617270 DNAJC21Q5F1R6 531 aaKnown RBP6.87□□□□□ -1.31
RFX3-212ENST00000617270 TXNDC2Q86VQ3 553 aa6.87□□□□□ -1.31
RFX3-212ENST00000617270 CCDC77Q9BR77 488 aa6.87□□□□□ -1.31
RFX3-212ENST00000617270 AKAP2Q9Y2D5 859 aa6.87□□□□□ -1.31
RFX3-212ENST00000617270 FLIIQ13045 1269 aa6.87□□□□□ -1.31
RFX3-212ENST00000617270 KRT222Q8N1A0 295 aa6.87□□□□□ -1.31
RFX3-212ENST00000617270 MAP3K12Q12852 859 aa6.87□□□□□ -1.31
RFX3-212ENST00000617270 FEZ2Q9UHY8 353 aaPredicted RBP6.87□□□□□ -1.31
RFX3-212ENST00000617270 ZPR1O75312 459 aa6.87□□□□□ -1.31
RFX3-212ENST00000617270 RFC1P35251 1148 aaPredicted RBP6.87□□□□□ -1.31
RFX3-212ENST00000617270 MAP3K9P80192 1104 aa6.87□□□□□ -1.31
RFX3-212ENST00000617270 PLCB3Q01970 1234 aa6.87□□□□□ -1.31
RFX3-212ENST00000617270 IFI16Q16666 785 aaKnown RBP6.87□□□□□ -1.31
RFX3-212ENST00000617270 CCDC88BA6NC98 1476 aa6.87□□□□□ -1.31
RFX3-212ENST00000617270 CTAGE15A4D2H0 777 aa6.87□□□□□ -1.31
RFX3-212ENST00000617270 CTAGE8P0CG41 777 aa6.87□□□□□ -1.31
RFX3-212ENST00000617270 RRS1Q15050 365 aaKnown RBP6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms