RNA–Protein interactions for RNA: ENST00000615842.1

U1.27-201, humanhuman

BASIC

Gene U1, Length 164 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U1.27-201ENST00000615842 INTS5Q6P9B9 1019 aaKnown RBP11.1□□□□□ -0.63
U1.27-201ENST00000615842 POTEAQ6S8J7 498 aa11.1□□□□□ -0.63
U1.27-201ENST00000615842 C9orf78Q9NZ63 289 aaPredicted RBP11.1□□□□□ -0.63
U1.27-201ENST00000615842 CCNL1Q9UK58 526 aaPredicted RBP11.1□□□□□ -0.63
U1.27-201ENST00000615842 PCDHB15Q9Y5E8 787 aa11.1□□□□□ -0.63
U1.27-201ENST00000615842 TJP1Q07157 1748 aa11.09□□□□□ -0.63
U1.27-201ENST00000615842 HMMRO75330 724 aa11.09□□□□□ -0.63
U1.27-201ENST00000615842 PIP4K2AP48426 406 aaPredicted RBP11.09□□□□□ -0.63
U1.27-201ENST00000615842 EIF5P55010 431 aaKnown RBP11.09□□□□□ -0.63
U1.27-201ENST00000615842 MEIS3Q99687 375 aa11.09□□□□□ -0.63
U1.27-201ENST00000615842 USP44Q9H0E7 712 aa11.09□□□□□ -0.63
U1.27-201ENST00000615842 ZBTB1Q9Y2K1 713 aa11.09□□□□□ -0.63
U1.27-201ENST00000615842 BTAF1O14981 1849 aa11.09□□□□□ -0.63
U1.27-201ENST00000615842 MAP3K15Q6ZN16 1313 aa11.09□□□□□ -0.63
U1.27-201ENST00000615842 KDM2BQ8NHM5 1336 aa11.09□□□□□ -0.63
U1.27-201ENST00000615842 N4BP2Q86UW6 1770 aaPredicted RBP11.08□□□□□ -0.64
U1.27-201ENST00000615842 NEURL1BA8MQ27 555 aa11.08□□□□□ -0.64
U1.27-201ENST00000615842 PLSCR1O15162 318 aa11.08□□□□□ -0.64
U1.27-201ENST00000615842 TRIM37O94972 964 aa11.08□□□□□ -0.64
U1.27-201ENST00000615842 TRIM28Q13263 835 aaKnown RBP11.08□□□□□ -0.64
U1.27-201ENST00000615842 TTLL7Q6ZT98 887 aa11.08□□□□□ -0.64
U1.27-201ENST00000615842 CCDC191Q8NCU4 936 aa11.08□□□□□ -0.64
U1.27-201ENST00000615842 MYD88Q99836 296 aa11.08□□□□□ -0.64
U1.27-201ENST00000615842 ZNF330Q9Y3S2 320 aaPredicted RBP11.08□□□□□ -0.64
U1.27-201ENST00000615842 UTYO14607 1347 aa11.08□□□□□ -0.64
U1.27-201ENST00000615842 BRWD3Q6RI45 1802 aa11.07□□□□□ -0.64
U1.27-201ENST00000615842 SBF2Q86WG5 1849 aa11.07□□□□□ -0.64
U1.27-201ENST00000615842 KAT6BQ8WYB5 2073 aa11.07□□□□□ -0.64
U1.27-201ENST00000615842 GRM8O00222 908 aa11.07□□□□□ -0.64
U1.27-201ENST00000615842 TCIRG1Q13488 830 aa11.07□□□□□ -0.64
U1.27-201ENST00000615842 GIGYF2Q6Y7W6 1299 aaKnown RBP11.07□□□□□ -0.64
U1.27-201ENST00000615842 PTF1AQ7RTS3 328 aa11.07□□□□□ -0.64
U1.27-201ENST00000615842 DZIP3Q86Y13 1208 aaKnown RBP11.07□□□□□ -0.64
U1.27-201ENST00000615842 ANKRD44Q8N8A2 993 aa11.07□□□□□ -0.64
U1.27-201ENST00000615842 GCC1Q96CN9 775 aa11.07□□□□□ -0.64
U1.27-201ENST00000615842 ARXQ96QS3 562 aa11.07□□□□□ -0.64
U1.27-201ENST00000615842 ZNF652Q9Y2D9 606 aa11.07□□□□□ -0.64
U1.27-201ENST00000615842 RREB1Q92766 1687 aa11.06□□□□□ -0.64
U1.27-201ENST00000615842 RPS6KA4O75676 772 aa11.06□□□□□ -0.64
U1.27-201ENST00000615842 IGHDP01880 384 aa11.06□□□□□ -0.64
U1.27-201ENST00000615842 IGKV5-2P06315 115 aa11.06□□□□□ -0.64
U1.27-201ENST00000615842 GCKRQ14397 625 aa11.06□□□□□ -0.64
U1.27-201ENST00000615842 CLEC4GQ6UXB4 293 aa11.06□□□□□ -0.64
U1.27-201ENST00000615842 LINC00116Q8NCU8 138 aa11.06□□□□□ -0.64
U1.27-201ENST00000615842 ZBTB3Q9H5J0 574 aa11.06□□□□□ -0.64
U1.27-201ENST00000615842 CWC25Q9NXE8 425 aaPredicted RBP11.06□□□□□ -0.64
U1.27-201ENST00000615842 RTCBQ9Y3I0 505 aaKnown RBP11.06□□□□□ -0.64
U1.27-201ENST00000615842 LY75O60449 1722 aa11.05□□□□□ -0.64
U1.27-201ENST00000615842 ADRA2BP18089 450 aa11.05□□□□□ -0.64
U1.27-201ENST00000615842 ATP8B2P98198 1209 aa11.05□□□□□ -0.64
U1.27-201ENST00000615842 CWF19L2Q2TBE0 894 aaKnown RBP11.05□□□□□ -0.64
U1.27-201ENST00000615842 CEP85Q6P2H3 762 aa11.05□□□□□ -0.64
U1.27-201ENST00000615842 ISCA1Q9BUE6 129 aa11.05□□□□□ -0.64
U1.27-201ENST00000615842 COL15A1P39059 1388 aa11.04□□□□□ -0.64
U1.27-201ENST00000615842 APBA3O96018 575 aa11.04□□□□□ -0.64
U1.27-201ENST00000615842 HSP90B1P14625 803 aaKnown RBP11.04□□□□□ -0.64
U1.27-201ENST00000615842 SMC5Q8IY18 1101 aa11.04□□□□□ -0.64
U1.27-201ENST00000615842 AK7Q96M32 723 aa11.04□□□□□ -0.64
U1.27-201ENST00000615842 C1orf115Q9H7X2 142 aa11.04□□□□□ -0.64
U1.27-201ENST00000615842 ZBTB47Q9UFB7 747 aaPredicted RBP11.04□□□□□ -0.64
U1.27-201ENST00000615842 LRRFIP2Q9Y608 721 aaKnown RBP11.04□□□□□ -0.64
U1.27-201ENST00000615842 COL5A3P25940 1745 aaPredicted RBP11.04□□□□□ -0.64
U1.27-201ENST00000615842 ATP5J2-PTCD1G3V325 749 aa11.03□□□□□ -0.64
U1.27-201ENST00000615842 H7C1W4 665 aa11.03□□□□□ -0.64
U1.27-201ENST00000615842 GNPATO15228 680 aa11.03□□□□□ -0.64
U1.27-201ENST00000615842 NBPF7P0C2Y1 421 aaPredicted RBP11.03□□□□□ -0.64
U1.27-201ENST00000615842 MTX1Q13505 466 aa11.03□□□□□ -0.64
U1.27-201ENST00000615842 PARP10Q53GL7 1025 aa11.03□□□□□ -0.64
U1.27-201ENST00000615842 ILDR1Q86SU0 546 aaPredicted RBP11.03□□□□□ -0.64
U1.27-201ENST00000615842 TBC1D2BQ9UPU7 963 aa11.03□□□□□ -0.64
U1.27-201ENST00000615842 ARFGEF2Q9Y6D5 1785 aa11.03□□□□□ -0.64
U1.27-201ENST00000615842 ZPR1O75312 459 aa11.02□□□□□ -0.65
U1.27-201ENST00000615842 CAMTA2O94983 1202 aa11.02□□□□□ -0.65
U1.27-201ENST00000615842 PCCAP05165 728 aaPredicted RBP11.02□□□□□ -0.65
U1.27-201ENST00000615842 SF3B2Q13435 895 aaKnown RBP11.02□□□□□ -0.65
U1.27-201ENST00000615842 TXNRD1Q16881 649 aa11.02□□□□□ -0.65
U1.27-201ENST00000615842 HSP90AB4PQ58FF6 505 aa11.02□□□□□ -0.65
U1.27-201ENST00000615842 TRAPPC3LQ5T215 181 aa11.02□□□□□ -0.65
U1.27-201ENST00000615842 SIRT2Q8IXJ6 389 aa11.02□□□□□ -0.65
U1.27-201ENST00000615842 DCTPP1Q9H773 170 aa11.02□□□□□ -0.65
U1.27-201ENST00000615842 NARFQ9UHQ1 456 aa11.02□□□□□ -0.65
U1.27-201ENST00000615842 NUP188Q5SRE5 1749 aa11.01□□□□□ -0.65
U1.27-201ENST00000615842 SSFA2P28290 1259 aa11.01□□□□□ -0.65
U1.27-201ENST00000615842 HLFQ16534 295 aa11.01□□□□□ -0.65
U1.27-201ENST00000615842 PPP1R42Q7Z4L9 355 aa11.01□□□□□ -0.65
U1.27-201ENST00000615842 NLRP10Q86W26 655 aa11.01□□□□□ -0.65
U1.27-201ENST00000615842 ZNF34Q8IZ26 560 aa11.01□□□□□ -0.65
U1.27-201ENST00000615842 ZBTB38Q8NAP3 1195 aaPredicted RBP11.01□□□□□ -0.65
U1.27-201ENST00000615842 FLAD1Q8NFF5 587 aa11.01□□□□□ -0.65
U1.27-201ENST00000615842 SSH3Q8TE77 659 aa11.01□□□□□ -0.65
U1.27-201ENST00000615842 SRGAP3O43295 1099 aa11□□□□□ -0.65
U1.27-201ENST00000615842 RAB11FIP3O75154 756 aa11□□□□□ -0.65
U1.27-201ENST00000615842 RFC4P35249 363 aa11□□□□□ -0.65
U1.27-201ENST00000615842 KCNQ4P56696 695 aa11□□□□□ -0.65
U1.27-201ENST00000615842 POLA2Q14181 598 aa11□□□□□ -0.65
U1.27-201ENST00000615842 UBE3BQ7Z3V4 1068 aa11□□□□□ -0.65
U1.27-201ENST00000615842 CCDC125Q86Z20 511 aa11□□□□□ -0.65
U1.27-201ENST00000615842 SUCLG2Q96I99 432 aa11□□□□□ -0.65
U1.27-201ENST00000615842 LRRC4BQ9NT99 713 aa11□□□□□ -0.65
U1.27-201ENST00000615842 CDHR2Q9BYE9 1310 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms