RNA–Protein interactions for RNA: ENST00000610970.1

HOXA4-204, Transcript of homeobox A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA4, Length 1,728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA4-204ENST00000610970 SKOR2Q2VWA4 1001 aaPredicted RBP29.01■■■□□ 2.23
HOXA4-204ENST00000610970 L1TD1Q5T7N2 865 aaKnown RBP29.01■■■□□ 2.23
HOXA4-204ENST00000610970 RIC3Q7Z5B4 369 aa29.01■■■□□ 2.23
HOXA4-204ENST00000610970 GLRX3O76003 335 aaKnown RBP29■■■□□ 2.23
HOXA4-204ENST00000610970 CWF19L2Q2TBE0 894 aaKnown RBP29■■■□□ 2.23
HOXA4-204ENST00000610970 GPATCH3Q96I76 525 aa29■■■□□ 2.23
HOXA4-204ENST00000610970 ZNF496Q96IT1 587 aaPredicted RBP28.99■■■□□ 2.23
HOXA4-204ENST00000610970 SOS2Q07890 1332 aaPredicted RBP28.98■■■□□ 2.23
HOXA4-204ENST00000610970 METTL22Q9BUU2 404 aaPredicted RBP28.98■■■□□ 2.23
HOXA4-204ENST00000610970 WDR17Q8IZU2 1322 aa28.98■■■□□ 2.23
HOXA4-204ENST00000610970 UNC5CLQ8IV45 518 aa28.97■■■□□ 2.23
HOXA4-204ENST00000610970 ANO2Q9NQ90 1003 aa28.97■■■□□ 2.23
HOXA4-204ENST00000610970 CABP4P57796 275 aa28.97■■■□□ 2.23
HOXA4-204ENST00000610970 AIMP1Q12904 312 aaKnown RBP28.97■■■□□ 2.23
HOXA4-204ENST00000610970 LAMB4A4D0S4 1761 aa28.96■■■□□ 2.23
HOXA4-204ENST00000610970 ERBB4Q15303 1308 aa28.96■■■□□ 2.23
HOXA4-204ENST00000610970 GOLGA6L22H0YM25 854 aa28.95■■■□□ 2.23
HOXA4-204ENST00000610970 XAGE3Q8WTP9 111 aa28.95■■■□□ 2.23
HOXA4-204ENST00000610970 SUCLG2Q96I99 432 aa28.95■■■□□ 2.23
HOXA4-204ENST00000610970 FOXD4L1Q9NU39 408 aa28.95■■■□□ 2.23
HOXA4-204ENST00000610970 NEURL1BA8MQ27 555 aa28.94■■■□□ 2.22
HOXA4-204ENST00000610970 IGKV5-2P06315 115 aa28.94■■■□□ 2.22
HOXA4-204ENST00000610970 COL15A1P39059 1388 aa28.94■■■□□ 2.22
HOXA4-204ENST00000610970 PCDH11XQ9BZA7 1347 aa28.94■■■□□ 2.22
HOXA4-204ENST00000610970 PCDH11YQ9BZA8 1340 aa28.94■■■□□ 2.22
HOXA4-204ENST00000610970 COPS6Q7L5N1 327 aa28.94■■■□□ 2.22
HOXA4-204ENST00000610970 ECHDC1Q9NTX5 307 aa28.94■■■□□ 2.22
HOXA4-204ENST00000610970 GCKRQ14397 625 aa28.93■■■□□ 2.22
HOXA4-204ENST00000610970 ANKRD13DQ6ZTN6 518 aa28.93■■■□□ 2.22
HOXA4-204ENST00000610970 LRP10Q7Z4F1 713 aa28.93■■■□□ 2.22
HOXA4-204ENST00000610970 PRDM11Q9NQV5 511 aa28.93■■■□□ 2.22
HOXA4-204ENST00000610970 SGSM2O43147 1006 aa28.92■■■□□ 2.22
HOXA4-204ENST00000610970 IFIT2P09913 472 aaKnown RBP28.92■■■□□ 2.22
HOXA4-204ENST00000610970 NEK4P51957 841 aa28.92■■■□□ 2.22
HOXA4-204ENST00000610970 G3BP1Q13283 466 aaKnown RBP eCLIP28.92■■■□□ 2.22
HOXA4-204ENST00000610970 KAZALD1Q96I82 304 aa28.92■■■□□ 2.22
HOXA4-204ENST00000610970 ISY1Q9ULR0 285 aaKnown RBP28.92■■■□□ 2.22
HOXA4-204ENST00000610970 RUFY2Q8WXA3 655 aa28.91■■■□□ 2.22
HOXA4-204ENST00000610970 BICC1Q9H694 974 aaKnown RBP28.91■■■□□ 2.22
HOXA4-204ENST00000610970 ERVV-2B6SEH9 535 aa28.91■■■□□ 2.22
HOXA4-204ENST00000610970 MYL6BP14649 208 aa28.91■■■□□ 2.22
HOXA4-204ENST00000610970 HSPA4P34932 840 aa28.91■■■□□ 2.22
HOXA4-204ENST00000610970 ZCRB1Q8TBF4 217 aaKnown RBP28.91■■■□□ 2.22
HOXA4-204ENST00000610970 CYP2E1P05181 493 aaPredicted RBP28.9■■■□□ 2.22
HOXA4-204ENST00000610970 USP16Q9Y5T5 823 aa28.9■■■□□ 2.22
HOXA4-204ENST00000610970 SSFA2P28290 1259 aa28.89■■■□□ 2.22
HOXA4-204ENST00000610970 NKX1-1Q15270 411 aaPredicted RBP28.89■■■□□ 2.22
HOXA4-204ENST00000610970 COL5A2P05997 1499 aaPredicted RBP28.89■■■□□ 2.21
HOXA4-204ENST00000610970 RAD50Q92878 1312 aa28.88■■■□□ 2.21
HOXA4-204ENST00000610970 MYD88Q99836 296 aa28.88■■■□□ 2.21
HOXA4-204ENST00000610970 FSD2A1L4K1 749 aa28.87■■■□□ 2.21
HOXA4-204ENST00000610970 TOM1L2Q6ZVM7 507 aa28.87■■■□□ 2.21
HOXA4-204ENST00000610970 INTS4Q96HW7 963 aaKnown RBP28.87■■■□□ 2.21
HOXA4-204ENST00000610970 CARD10Q9BWT7 1032 aa28.87■■■□□ 2.21
HOXA4-204ENST00000610970 GLI3P10071 1580 aa28.87■■■□□ 2.21
HOXA4-204ENST00000610970 ABCA3Q99758 1704 aa28.87■■■□□ 2.21
HOXA4-204ENST00000610970 GOLGA6L3A6NEY3 463 aa28.86■■■□□ 2.21
HOXA4-204ENST00000610970 CUL4AQ13619 759 aa28.86■■■□□ 2.21
HOXA4-204ENST00000610970 KIAA1211Q6ZU35 1233 aa28.86■■■□□ 2.21
HOXA4-204ENST00000610970 EVI5LQ96CN4 794 aa28.86■■■□□ 2.21
HOXA4-204ENST00000610970 PA2G4Q9UQ80 394 aaKnown RBP28.86■■■□□ 2.21
HOXA4-204ENST00000610970 HIP1O00291 1037 aa28.86■■■□□ 2.21
HOXA4-204ENST00000610970 PLBD2Q8NHP8 589 aa28.86■■■□□ 2.21
HOXA4-204ENST00000610970 UBR2Q8IWV8 1755 aa28.85■■■□□ 2.21
HOXA4-204ENST00000610970 ARFGEF2Q9Y6D5 1785 aa28.85■■■□□ 2.21
HOXA4-204ENST00000610970 BAG4O95429 457 aaKnown RBP28.85■■■□□ 2.21
HOXA4-204ENST00000610970 HSPA1LP34931 641 aa28.85■■■□□ 2.21
HOXA4-204ENST00000610970 TMX3Q96JJ7 454 aa28.85■■■□□ 2.21
HOXA4-204ENST00000610970 PALD1Q9ULE6 856 aa28.85■■■□□ 2.21
HOXA4-204ENST00000610970 SASH1O94885 1247 aa28.84■■■□□ 2.21
HOXA4-204ENST00000610970 AACSQ86V21 672 aa28.84■■■□□ 2.21
HOXA4-204ENST00000610970 AFDNP55196 1824 aaKnown RBP28.83■■■□□ 2.21
HOXA4-204ENST00000610970 LSG1Q9H089 658 aaKnown RBP28.83■■■□□ 2.21
HOXA4-204ENST00000610970 DIAPH3Q9NSV4 1193 aa28.83■■■□□ 2.21
HOXA4-204ENST00000610970 MAP4K4O95819 1239 aaPredicted RBP28.83■■■□□ 2.21
HOXA4-204ENST00000610970 IL2RBP14784 551 aa28.83■■■□□ 2.21
HOXA4-204ENST00000610970 COPRSQ9NQ92 184 aa28.83■■■□□ 2.21
HOXA4-204ENST00000610970 PAPPAQ13219 1627 aa28.82■■■□□ 2.2
HOXA4-204ENST00000610970 NHSL1Q5SYE7 1610 aa28.82■■■□□ 2.2
HOXA4-204ENST00000610970 ROBO1Q9Y6N7 1651 aa28.81■■■□□ 2.2
HOXA4-204ENST00000610970 RABL6Q3YEC7 729 aaPredicted RBP28.81■■■□□ 2.2
HOXA4-204ENST00000610970 IL25Q9H293 177 aa28.8■■■□□ 2.2
HOXA4-204ENST00000610970 ZGPATQ8N5A5 531 aaKnown RBP28.78■■■□□ 2.2
HOXA4-204ENST00000610970 EAF2Q96CJ1 260 aaPredicted RBP28.78■■■□□ 2.2
HOXA4-204ENST00000610970 GZF1Q9H116 711 aaPredicted RBP28.78■■■□□ 2.2
HOXA4-204ENST00000610970 CWC27Q6UX04 472 aaKnown RBP28.77■■■□□ 2.2
HOXA4-204ENST00000610970 KCPQ6ZWJ8 1503 aa28.76■■■□□ 2.19
HOXA4-204ENST00000610970 MRE11P49959 708 aa28.76■■■□□ 2.19
HOXA4-204ENST00000610970 BRPF3Q9ULD4 1205 aa28.76■■■□□ 2.19
HOXA4-204ENST00000610970 SNX14Q9Y5W7 946 aa28.76■■■□□ 2.19
HOXA4-204ENST00000610970 SHANK3Q9BYB0 1731 aa28.75■■■□□ 2.19
HOXA4-204ENST00000610970 KLHL40Q2TBA0 621 aa28.75■■■□□ 2.19
HOXA4-204ENST00000610970 KCNB2Q92953 911 aa28.75■■■□□ 2.19
HOXA4-204ENST00000610970 SNRKQ9NRH2 765 aa28.75■■■□□ 2.19
HOXA4-204ENST00000610970 TNS2Q63HR2 1409 aa28.75■■■□□ 2.19
HOXA4-204ENST00000610970 RFX5P48382 616 aaPredicted RBP28.74■■■□□ 2.19
HOXA4-204ENST00000610970 EPHA10Q5JZY3 1008 aa28.74■■■□□ 2.19
HOXA4-204ENST00000610970 A0A087WZG4 1122 aa28.73■■■□□ 2.19
HOXA4-204ENST00000610970 CASP7P55210 303 aa28.73■■■□□ 2.19
HOXA4-204ENST00000610970 EVA1CP58658 441 aa28.73■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms