RNA–Protein interactions for RNA: ENST00000610756.4

TCF3-219, Transcript of transcription factor 3, humanhuman

TSL 1 (best)

Gene TCF3, Length 1,343 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-219ENST00000610756 H0YIN7 160 aa25.15■■□□□ 1.62
TCF3-219ENST00000610756 PDE6BP35913 854 aa25.15■■□□□ 1.62
TCF3-219ENST00000610756 CNBD1Q8NA66 436 aa25.15■■□□□ 1.62
TCF3-219ENST00000610756 TTLL7Q6ZT98 887 aa25.14■■□□□ 1.62
TCF3-219ENST00000610756 LRP10Q7Z4F1 713 aa25.14■■□□□ 1.62
TCF3-219ENST00000610756 C2CD5Q86YS7 1000 aa25.14■■□□□ 1.62
TCF3-219ENST00000610756 NIP7Q9Y221 180 aaKnown RBP eCLIP25.14■■□□□ 1.62
TCF3-219ENST00000610756 MAP3K15Q6ZN16 1313 aa25.14■■□□□ 1.61
TCF3-219ENST00000610756 AFDNP55196 1824 aaKnown RBP25.14■■□□□ 1.61
TCF3-219ENST00000610756 TPTE2Q6XPS3 522 aa25.13■■□□□ 1.61
TCF3-219ENST00000610756 KIF6Q6ZMV9 814 aa25.13■■□□□ 1.61
TCF3-219ENST00000610756 ARHGAP27Q6ZUM4 889 aa25.13■■□□□ 1.61
TCF3-219ENST00000610756 NBPF5PQ86XG9 351 aaPredicted RBP25.13■■□□□ 1.61
TCF3-219ENST00000610756 IFT57Q9NWB7 429 aa25.13■■□□□ 1.61
TCF3-219ENST00000610756 LAMB4A4D0S4 1761 aa25.13■■□□□ 1.61
TCF3-219ENST00000610756 HOXB7P09629 217 aa25.12■■□□□ 1.61
TCF3-219ENST00000610756 GNAI1P63096 354 aa25.12■■□□□ 1.61
TCF3-219ENST00000610756 KRT24Q2M2I5 525 aa25.12■■□□□ 1.61
TCF3-219ENST00000610756 NCBP3Q53F19 620 aaKnown RBP25.12■■□□□ 1.61
TCF3-219ENST00000610756 MBIPQ9NS73 344 aa25.12■■□□□ 1.61
TCF3-219ENST00000610756 NPHP1O15259 732 aa25.12■■□□□ 1.61
TCF3-219ENST00000610756 ST5P78524 1137 aa25.12■■□□□ 1.61
TCF3-219ENST00000610756 CCDC27Q2M243 656 aa25.12■■□□□ 1.61
TCF3-219ENST00000610756 CCDC24Q8N4L8 307 aa25.12■■□□□ 1.61
TCF3-219ENST00000610756 TTLL6Q8N841 843 aa25.12■■□□□ 1.61
TCF3-219ENST00000610756 DDX21Q9NR30 783 aaKnown RBP eCLIP25.1■■□□□ 1.61
TCF3-219ENST00000610756 BCORQ6W2J9 1755 aa25.09■■□□□ 1.61
TCF3-219ENST00000610756 PROSER3Q2NL68 480 aa25.09■■□□□ 1.61
TCF3-219ENST00000610756 GIGYF2Q6Y7W6 1299 aaKnown RBP25.09■■□□□ 1.61
TCF3-219ENST00000610756 NECTIN2Q92692 538 aa25.09■■□□□ 1.61
TCF3-219ENST00000610756 ZBTB3Q9H5J0 574 aa25.09■■□□□ 1.61
TCF3-219ENST00000610756 BRCA1P38398 1863 aaKnown RBP25.07■■□□□ 1.6
TCF3-219ENST00000610756 KLRG2A4D1S0 409 aaPredicted RBP25.07■■□□□ 1.6
TCF3-219ENST00000610756 ANXA1P04083 346 aa25.07■■□□□ 1.6
TCF3-219ENST00000610756 DUSP27Q5VZP5 1158 aa25.07■■□□□ 1.6
TCF3-219ENST00000610756 SRGNP10124 158 aa25.06■■□□□ 1.6
TCF3-219ENST00000610756 HDGFL1Q5TGJ6 251 aa25.06■■□□□ 1.6
TCF3-219ENST00000610756 COPS6Q7L5N1 327 aa25.06■■□□□ 1.6
TCF3-219ENST00000610756 WWC1Q8IX03 1113 aa25.06■■□□□ 1.6
TCF3-219ENST00000610756 ZNF34Q8IZ26 560 aa25.06■■□□□ 1.6
TCF3-219ENST00000610756 ZNF622Q969S3 477 aaKnown RBP eCLIP25.06■■□□□ 1.6
TCF3-219ENST00000610756 NYXQ9GZU5 481 aa25.06■■□□□ 1.6
TCF3-219ENST00000610756 ATP10DQ9P241 1426 aa25.05■■□□□ 1.6
TCF3-219ENST00000610756 DBF4Q9UBU7 674 aaPredicted RBP25.05■■□□□ 1.6
TCF3-219ENST00000610756 ADCY9O60503 1353 aa25.05■■□□□ 1.6
TCF3-219ENST00000610756 FAM177BA6PVY3 158 aa25.04■■□□□ 1.6
TCF3-219ENST00000610756 GTF2E1P29083 439 aaPredicted RBP25.04■■□□□ 1.6
TCF3-219ENST00000610756 STYK1Q6J9G0 422 aa25.04■■□□□ 1.6
TCF3-219ENST00000610756 CHPF2Q9P2E5 772 aa25.04■■□□□ 1.6
TCF3-219ENST00000610756 XAGE3Q8WTP9 111 aa25.03■■□□□ 1.6
TCF3-219ENST00000610756 CNKSR1Q969H4 720 aa25.03■■□□□ 1.6
TCF3-219ENST00000610756 MASTLQ96GX5 879 aa25.03■■□□□ 1.6
TCF3-219ENST00000610756 AIMP1Q12904 312 aaKnown RBP25.02■■□□□ 1.6
TCF3-219ENST00000610756 UBN2Q6ZU65 1347 aa25.01■■□□□ 1.59
TCF3-219ENST00000610756 GPTP24298 496 aa25.01■■□□□ 1.59
TCF3-219ENST00000610756 PARP10Q53GL7 1025 aa25.01■■□□□ 1.59
TCF3-219ENST00000610756 SUSD4Q5VX71 490 aa25.01■■□□□ 1.59
TCF3-219ENST00000610756 HYPKQ9NX55 129 aa25.01■■□□□ 1.59
TCF3-219ENST00000610756 ARFGEF1Q9Y6D6 1849 aa25■■□□□ 1.59
TCF3-219ENST00000610756 C8orf58Q8NAV2 365 aa25■■□□□ 1.59
TCF3-219ENST00000610756 CHMP4AQ9BY43 222 aa25■■□□□ 1.59
TCF3-219ENST00000610756 IL16Q14005 1332 aa24.99■■□□□ 1.59
TCF3-219ENST00000610756 SENP3-EIF4A1A0A087X0R7 540 aa24.99■■□□□ 1.59
TCF3-219ENST00000610756 ELL2O00472 640 aaPredicted RBP24.99■■□□□ 1.59
TCF3-219ENST00000610756 NPR1P16066 1061 aa24.99■■□□□ 1.59
TCF3-219ENST00000610756 HSP90AB3PQ58FF7 597 aa24.99■■□□□ 1.59
TCF3-219ENST00000610756 C9orf131Q5VYM1 1079 aa24.99■■□□□ 1.59
TCF3-219ENST00000610756 PPP1R42Q7Z4L9 355 aa24.99■■□□□ 1.59
TCF3-219ENST00000610756 ANKRD31Q8N7Z5 1873 aa24.99■■□□□ 1.59
TCF3-219ENST00000610756 IBTKQ9P2D0 1353 aaPredicted RBP24.98■■□□□ 1.59
TCF3-219ENST00000610756 ERFEQ4G0M1 354 aa24.98■■□□□ 1.59
TCF3-219ENST00000610756 NUTM1Q86Y26 1132 aa24.98■■□□□ 1.59
TCF3-219ENST00000610756 FAM9BQ8IZU0 186 aa24.98■■□□□ 1.59
TCF3-219ENST00000610756 TCIRG1Q13488 830 aa24.97■■□□□ 1.59
TCF3-219ENST00000610756 ANKRD13DQ6ZTN6 518 aa24.97■■□□□ 1.59
TCF3-219ENST00000610756 C21orf2O43822 256 aa24.96■■□□□ 1.59
TCF3-219ENST00000610756 NTSR2O95665 410 aa24.96■■□□□ 1.59
TCF3-219ENST00000610756 WDR63Q8IWG1 891 aa24.96■■□□□ 1.59
TCF3-219ENST00000610756 PLBD2Q8NHP8 589 aa24.96■■□□□ 1.59
TCF3-219ENST00000610756 GPBP1L1Q9HC44 474 aaPredicted RBP24.96■■□□□ 1.59
TCF3-219ENST00000610756 DLEC1Q9Y238 1755 aa24.96■■□□□ 1.59
TCF3-219ENST00000610756 NUP98P52948 1817 aa24.95■■□□□ 1.59
TCF3-219ENST00000610756 CRY2Q49AN0 593 aa24.95■■□□□ 1.58
TCF3-219ENST00000610756 PRPF40BQ6NWY9 871 aaKnown RBP24.95■■□□□ 1.58
TCF3-219ENST00000610756 ALDH1B1P30837 517 aa24.94■■□□□ 1.58
TCF3-219ENST00000610756 SLC10A5Q5PT55 438 aa24.94■■□□□ 1.58
TCF3-219ENST00000610756 TSR2Q969E8 191 aaKnown RBP24.94■■□□□ 1.58
TCF3-219ENST00000610756 UTP14AQ9BVJ6 771 aaKnown RBP24.94■■□□□ 1.58
TCF3-219ENST00000610756 LMNB1P20700 586 aa24.93■■□□□ 1.58
TCF3-219ENST00000610756 CCDC30Q5VVM6 783 aa24.93■■□□□ 1.58
TCF3-219ENST00000610756 NLRP10Q86W26 655 aa24.93■■□□□ 1.58
TCF3-219ENST00000610756 C7orf43Q8WVR3 580 aa24.93■■□□□ 1.58
TCF3-219ENST00000610756 RNF181Q9P0P0 153 aa24.93■■□□□ 1.58
TCF3-219ENST00000610756 NFKBIEO00221 500 aa24.92■■□□□ 1.58
TCF3-219ENST00000610756 SOGA3Q5TF21 947 aa24.92■■□□□ 1.58
TCF3-219ENST00000610756 TSPYL6Q8N831 410 aa24.92■■□□□ 1.58
TCF3-219ENST00000610756 ZNF526Q8TF50 670 aaPredicted RBP24.92■■□□□ 1.58
TCF3-219ENST00000610756 ZNF219Q9P2Y4 722 aaPredicted RBP24.92■■□□□ 1.58
TCF3-219ENST00000610756 SALL2Q9Y467 1007 aaPredicted RBP24.92■■□□□ 1.58
TCF3-219ENST00000610756 RNF123Q5XPI4 1314 aa24.92■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms