RNA–Protein interactions for RNA: ENST00000610454.4

SENP3-209, Transcript of SUMO specific peptidase 3, humanhuman

TSL 3

Gene SENP3, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-209ENST00000610454 DALRD3Q5D0E6 543 aaKnown RBP17.4■□□□□ 0.38
SENP3-209ENST00000610454 NBPF5PQ86XG9 351 aaPredicted RBP17.4■□□□□ 0.38
SENP3-209ENST00000610454 NECTIN2Q92692 538 aa17.4■□□□□ 0.38
SENP3-209ENST00000610454 NIP7Q9Y221 180 aaKnown RBP eCLIP17.4■□□□□ 0.38
SENP3-209ENST00000610454 MAP3K15Q6ZN16 1313 aa17.4■□□□□ 0.38
SENP3-209ENST00000610454 ERVV-1B6SEH8 477 aa17.39■□□□□ 0.37
SENP3-209ENST00000610454 H0YIN7 160 aa17.39■□□□□ 0.37
SENP3-209ENST00000610454 HOXB7P09629 217 aa17.39■□□□□ 0.37
SENP3-209ENST00000610454 PDE6BP35913 854 aa17.39■□□□□ 0.37
SENP3-209ENST00000610454 MBIPQ9NS73 344 aa17.39■□□□□ 0.37
SENP3-209ENST00000610454 PDZRN3Q9UPQ7 1066 aa17.39■□□□□ 0.37
SENP3-209ENST00000610454 DLEC1Q9Y238 1755 aa17.38■□□□□ 0.37
SENP3-209ENST00000610454 NUP98P52948 1817 aa17.38■□□□□ 0.37
SENP3-209ENST00000610454 ARFGEF1Q9Y6D6 1849 aa17.38■□□□□ 0.37
SENP3-209ENST00000610454 KRT24Q2M2I5 525 aa17.38■□□□□ 0.37
SENP3-209ENST00000610454 HDGFL1Q5TGJ6 251 aa17.38■□□□□ 0.37
SENP3-209ENST00000610454 PRR5LQ6MZQ0 368 aa17.38■□□□□ 0.37
SENP3-209ENST00000610454 C2CD5Q86YS7 1000 aa17.38■□□□□ 0.37
SENP3-209ENST00000610454 FAM9BQ8IZU0 186 aa17.38■□□□□ 0.37
SENP3-209ENST00000610454 BRIP1Q9BX63 1249 aa17.38■□□□□ 0.37
SENP3-209ENST00000610454 ZBTB3Q9H5J0 574 aa17.38■□□□□ 0.37
SENP3-209ENST00000610454 KCNA3P22001 575 aa17.37■□□□□ 0.37
SENP3-209ENST00000610454 GTF2E1P29083 439 aaPredicted RBP17.37■□□□□ 0.37
SENP3-209ENST00000610454 HLFQ16534 295 aa17.37■□□□□ 0.37
SENP3-209ENST00000610454 TPTE2Q6XPS3 522 aa17.37■□□□□ 0.37
SENP3-209ENST00000610454 TTLL7Q6ZT98 887 aa17.37■□□□□ 0.37
SENP3-209ENST00000610454 ANKRD31Q8N7Z5 1873 aa17.37■□□□□ 0.37
SENP3-209ENST00000610454 SENP3-EIF4A1A0A087X0R7 540 aa17.36■□□□□ 0.37
SENP3-209ENST00000610454 FAM177BA6PVY3 158 aa17.36■□□□□ 0.37
SENP3-209ENST00000610454 CCDC27Q2M243 656 aa17.36■□□□□ 0.37
SENP3-209ENST00000610454 DUSP27Q5VZP5 1158 aa17.36■□□□□ 0.37
SENP3-209ENST00000610454 ARHGAP27Q6ZUM4 889 aa17.36■□□□□ 0.37
SENP3-209ENST00000610454 CCDC24Q8N4L8 307 aa17.36■□□□□ 0.37
SENP3-209ENST00000610454 ANXA1P04083 346 aa17.35■□□□□ 0.37
SENP3-209ENST00000610454 ZNF853P0CG23 659 aa17.35■□□□□ 0.37
SENP3-209ENST00000610454 ZNF622Q969S3 477 aaKnown RBP eCLIP17.35■□□□□ 0.37
SENP3-209ENST00000610454 CHMP4AQ9BY43 222 aa17.35■□□□□ 0.37
SENP3-209ENST00000610454 NYXQ9GZU5 481 aa17.35■□□□□ 0.37
SENP3-209ENST00000610454 DDX21Q9NR30 783 aaKnown RBP eCLIP17.35■□□□□ 0.37
SENP3-209ENST00000610454 ATP10DQ9P241 1426 aa17.35■□□□□ 0.37
SENP3-209ENST00000610454 AIMP1Q12904 312 aaKnown RBP17.34■□□□□ 0.37
SENP3-209ENST00000610454 PDIA6Q15084 440 aa17.34■□□□□ 0.37
SENP3-209ENST00000610454 PROSER3Q2NL68 480 aa17.34■□□□□ 0.37
SENP3-209ENST00000610454 WWC1Q8IX03 1113 aa17.34■□□□□ 0.37
SENP3-209ENST00000610454 TTLL6Q8N841 843 aa17.34■□□□□ 0.37
SENP3-209ENST00000610454 ZNF784Q8NCA9 323 aaPredicted RBP17.34■□□□□ 0.37
SENP3-209ENST00000610454 CHPF2Q9P2E5 772 aa17.34■□□□□ 0.37
SENP3-209ENST00000610454 DBF4Q9UBU7 674 aaPredicted RBP17.34■□□□□ 0.37
SENP3-209ENST00000610454 GPTP24298 496 aa17.33■□□□□ 0.36
SENP3-209ENST00000610454 NCBP3Q53F19 620 aaKnown RBP17.33■□□□□ 0.36
SENP3-209ENST00000610454 GIGYF2Q6Y7W6 1299 aaKnown RBP17.33■□□□□ 0.36
SENP3-209ENST00000610454 SALL2Q9Y467 1007 aaPredicted RBP17.33■□□□□ 0.36
SENP3-209ENST00000610454 COL11A2P13942 1736 aaPredicted RBP17.33■□□□□ 0.36
SENP3-209ENST00000610454 HSP90AB3PQ58FF7 597 aa17.32■□□□□ 0.36
SENP3-209ENST00000610454 COPS6Q7L5N1 327 aa17.32■□□□□ 0.36
SENP3-209ENST00000610454 XAGE3Q8WTP9 111 aa17.32■□□□□ 0.36
SENP3-209ENST00000610454 ELL2O00472 640 aaPredicted RBP17.31■□□□□ 0.36
SENP3-209ENST00000610454 HYPKQ9NX55 129 aa17.31■□□□□ 0.36
SENP3-209ENST00000610454 CACNA1SQ13698 1873 aa17.31■□□□□ 0.36
SENP3-209ENST00000610454 ANKRD36CQ5JPF3 1778 aa17.3■□□□□ 0.36
SENP3-209ENST00000610454 IL16Q14005 1332 aa17.3■□□□□ 0.36
SENP3-209ENST00000610454 PARP10Q53GL7 1025 aa17.3■□□□□ 0.36
SENP3-209ENST00000610454 LRP10Q7Z4F1 713 aa17.3■□□□□ 0.36
SENP3-209ENST00000610454 PPP1R42Q7Z4L9 355 aa17.3■□□□□ 0.36
SENP3-209ENST00000610454 CNKSR1Q969H4 720 aa17.3■□□□□ 0.36
SENP3-209ENST00000610454 IBTKQ9P2D0 1353 aaPredicted RBP17.29■□□□□ 0.36
SENP3-209ENST00000610454 STYK1Q6J9G0 422 aa17.29■□□□□ 0.36
SENP3-209ENST00000610454 TSR2Q969E8 191 aaKnown RBP17.29■□□□□ 0.36
SENP3-209ENST00000610454 MASTLQ96GX5 879 aa17.29■□□□□ 0.36
SENP3-209ENST00000610454 UBN2Q6ZU65 1347 aa17.28■□□□□ 0.36
SENP3-209ENST00000610454 SRGNP10124 158 aa17.28■□□□□ 0.36
SENP3-209ENST00000610454 CCDC30Q5VVM6 783 aa17.28■□□□□ 0.36
SENP3-209ENST00000610454 ZNF34Q8IZ26 560 aa17.28■□□□□ 0.36
SENP3-209ENST00000610454 C8orf58Q8NAV2 365 aa17.28■□□□□ 0.36
SENP3-209ENST00000610454 NPR1P16066 1061 aa17.27■□□□□ 0.36
SENP3-209ENST00000610454 GOLGA2Q08379 1002 aa17.27■□□□□ 0.36
SENP3-209ENST00000610454 SUSD4Q5VX71 490 aa17.27■□□□□ 0.36
SENP3-209ENST00000610454 NUTM1Q86Y26 1132 aa17.27■□□□□ 0.36
SENP3-209ENST00000610454 WDR63Q8IWG1 891 aa17.27■□□□□ 0.36
SENP3-209ENST00000610454 PLBD2Q8NHP8 589 aa17.27■□□□□ 0.36
SENP3-209ENST00000610454 ARFGEF2Q9Y6D5 1785 aa17.27■□□□□ 0.35
SENP3-209ENST00000610454 ERFEQ4G0M1 354 aa17.26■□□□□ 0.35
SENP3-209ENST00000610454 ANKRD13DQ6ZTN6 518 aa17.26■□□□□ 0.35
SENP3-209ENST00000610454 UTP14AQ9BVJ6 771 aaKnown RBP17.26■□□□□ 0.35
SENP3-209ENST00000610454 STK31Q9BXU1 1019 aa17.26■□□□□ 0.35
SENP3-209ENST00000610454 ZNF219Q9P2Y4 722 aaPredicted RBP17.26■□□□□ 0.35
SENP3-209ENST00000610454 ADCY9O60503 1353 aa17.26■□□□□ 0.35
SENP3-209ENST00000610454 TCIRG1Q13488 830 aa17.25■□□□□ 0.35
SENP3-209ENST00000610454 SOGA3Q5TF21 947 aa17.25■□□□□ 0.35
SENP3-209ENST00000610454 PRPF40BQ6NWY9 871 aaKnown RBP17.25■□□□□ 0.35
SENP3-209ENST00000610454 ZNF526Q8TF50 670 aaPredicted RBP17.25■□□□□ 0.35
SENP3-209ENST00000610454 RPGRQ92834 1020 aaKnown RBP17.25■□□□□ 0.35
SENP3-209ENST00000610454 GPBP1L1Q9HC44 474 aaPredicted RBP17.25■□□□□ 0.35
SENP3-209ENST00000610454 RNF181Q9P0P0 153 aa17.25■□□□□ 0.35
SENP3-209ENST00000610454 ABCC12Q96J65 1359 aa17.25■□□□□ 0.35
SENP3-209ENST00000610454 RNF123Q5XPI4 1314 aa17.24■□□□□ 0.35
SENP3-209ENST00000610454 TNRC6CQ9HCJ0 1690 aaKnown RBP17.24■□□□□ 0.35
SENP3-209ENST00000610454 C21orf2O43822 256 aa17.24■□□□□ 0.35
SENP3-209ENST00000610454 NTSR2O95665 410 aa17.24■□□□□ 0.35
SENP3-209ENST00000610454 DDX58O95786 925 aaKnown RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 103.8 ms