RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 CASTP20810 708 aaKnown RBP26.7■■□□□ 1.87
SHANK2-220ENST00000608988 TNRQ92752 1358 aa26.7■■□□□ 1.87
SHANK2-220ENST00000608988 CYP46A1Q9Y6A2 500 aa26.7■■□□□ 1.87
SHANK2-220ENST00000608988 HDGFL1Q5TGJ6 251 aa26.7■■□□□ 1.86
SHANK2-220ENST00000608988 NWD1Q149M9 1564 aa26.69■■□□□ 1.86
SHANK2-220ENST00000608988 SRGAP3O43295 1099 aa26.69■■□□□ 1.86
SHANK2-220ENST00000608988 DIP2AQ14689 1571 aa26.69■■□□□ 1.86
SHANK2-220ENST00000608988 ADGRL3Q9HAR2 1447 aa26.69■■□□□ 1.86
SHANK2-220ENST00000608988 DMTNQ08495 405 aa26.68■■□□□ 1.86
SHANK2-220ENST00000608988 GIMAP6Q6P9H5 292 aa26.68■■□□□ 1.86
SHANK2-220ENST00000608988 GPATCH3Q96I76 525 aa26.68■■□□□ 1.86
SHANK2-220ENST00000608988 PDCP20941 246 aa26.68■■□□□ 1.86
SHANK2-220ENST00000608988 MTX1Q13505 466 aa26.68■■□□□ 1.86
SHANK2-220ENST00000608988 FAM200AQ8TCP9 573 aa26.68■■□□□ 1.86
SHANK2-220ENST00000608988 PIK3C2AO00443 1686 aa26.67■■□□□ 1.86
SHANK2-220ENST00000608988 DNM1Q05193 864 aaKnown RBP26.67■■□□□ 1.86
SHANK2-220ENST00000608988 HDAC5Q9UQL6 1122 aa26.67■■□□□ 1.86
SHANK2-220ENST00000608988 HIP1O00291 1037 aa26.66■■□□□ 1.86
SHANK2-220ENST00000608988 IL17REQ8NFR9 667 aa26.66■■□□□ 1.86
SHANK2-220ENST00000608988 MAP4K4O95819 1239 aaPredicted RBP26.66■■□□□ 1.86
SHANK2-220ENST00000608988 KRT85P78386 507 aa26.66■■□□□ 1.86
SHANK2-220ENST00000608988 CWC27Q6UX04 472 aaKnown RBP26.66■■□□□ 1.86
SHANK2-220ENST00000608988 ERC1Q8IUD2 1116 aa26.66■■□□□ 1.86
SHANK2-220ENST00000608988 CCDC83Q8IWF9 413 aa26.66■■□□□ 1.86
SHANK2-220ENST00000608988 GTPBP4Q9BZE4 634 aaKnown RBP26.66■■□□□ 1.86
SHANK2-220ENST00000608988 MED1Q15648 1581 aaPredicted RBP26.65■■□□□ 1.86
SHANK2-220ENST00000608988 SYCP1Q15431 976 aa26.65■■□□□ 1.86
SHANK2-220ENST00000608988 ZKSCAN1P17029 563 aaPredicted RBP26.64■■□□□ 1.86
SHANK2-220ENST00000608988 MAP3K11Q16584 847 aa26.64■■□□□ 1.86
SHANK2-220ENST00000608988 JAKMIP1Q96N16 626 aaKnown RBP26.64■■□□□ 1.86
SHANK2-220ENST00000608988 ALDH8A1Q9H2A2 487 aaPredicted RBP26.64■■□□□ 1.86
SHANK2-220ENST00000608988 KCNF1Q9H3M0 494 aa26.64■■□□□ 1.86
SHANK2-220ENST00000608988 ESF1Q9H501 851 aaKnown RBP26.64■■□□□ 1.86
SHANK2-220ENST00000608988 CTIFO43310 598 aaKnown RBP26.64■■□□□ 1.85
SHANK2-220ENST00000608988 BCL2L12Q9HB09 334 aa26.64■■□□□ 1.85
SHANK2-220ENST00000608988 LARGE1O95461 756 aa26.63■■□□□ 1.85
SHANK2-220ENST00000608988 PSMA5P28066 241 aa26.63■■□□□ 1.85
SHANK2-220ENST00000608988 BEND3Q5T5X7 828 aa26.63■■□□□ 1.85
SHANK2-220ENST00000608988 ARHGAP30Q7Z6I6 1101 aaPredicted RBP26.63■■□□□ 1.85
SHANK2-220ENST00000608988 CLASRPQ8N2M8 674 aaKnown RBP26.63■■□□□ 1.85
SHANK2-220ENST00000608988 NECTIN2Q92692 538 aa26.63■■□□□ 1.85
SHANK2-220ENST00000608988 NUP62CLQ9H1M0 184 aa26.63■■□□□ 1.85
SHANK2-220ENST00000608988 ECHDC1Q9NTX5 307 aa26.63■■□□□ 1.85
SHANK2-220ENST00000608988 ANKRD1Q15327 319 aa26.62■■□□□ 1.85
SHANK2-220ENST00000608988 DNAAF4Q8WXU2 420 aa26.62■■□□□ 1.85
SHANK2-220ENST00000608988 ANKRD7Q92527 254 aa26.62■■□□□ 1.85
SHANK2-220ENST00000608988 EVI5LQ96CN4 794 aa26.62■■□□□ 1.85
SHANK2-220ENST00000608988 SNRKQ9NRH2 765 aa26.62■■□□□ 1.85
SHANK2-220ENST00000608988 SPG7Q9UQ90 795 aa26.62■■□□□ 1.85
SHANK2-220ENST00000608988 CEMIPQ8WUJ3 1361 aa26.62■■□□□ 1.85
SHANK2-220ENST00000608988 NECTIN1Q15223 517 aa26.62■■□□□ 1.85
SHANK2-220ENST00000608988 PLPPR3Q6T4P5 718 aa26.62■■□□□ 1.85
SHANK2-220ENST00000608988 SOX12O15370 315 aa26.61■■□□□ 1.85
SHANK2-220ENST00000608988 AP5Z1O43299 807 aa26.61■■□□□ 1.85
SHANK2-220ENST00000608988 C17orf53Q8N3J3 647 aaPredicted RBP26.61■■□□□ 1.85
SHANK2-220ENST00000608988 PYCARDQ9ULZ3 195 aa26.61■■□□□ 1.85
SHANK2-220ENST00000608988 KDM3BQ7LBC6 1761 aa26.61■■□□□ 1.85
SHANK2-220ENST00000608988 MPNDQ8N594 471 aa26.6■■□□□ 1.85
SHANK2-220ENST00000608988 SCAND2PQ9GZW5 306 aaPredicted RBP26.6■■□□□ 1.85
SHANK2-220ENST00000608988 PHAXQ9H814 394 aaKnown RBP26.6■■□□□ 1.85
SHANK2-220ENST00000608988 DDX19AQ9NUU7 478 aaKnown RBP26.6■■□□□ 1.85
SHANK2-220ENST00000608988 CAVIN2O95810 425 aa26.59■■□□□ 1.85
SHANK2-220ENST00000608988 TRHP20396 242 aaPredicted RBP26.59■■□□□ 1.85
SHANK2-220ENST00000608988 HOXC9P31274 260 aa26.59■■□□□ 1.85
SHANK2-220ENST00000608988 PDCL2Q8N4E4 241 aa26.59■■□□□ 1.85
SHANK2-220ENST00000608988 ZSCAN20P17040 1043 aaPredicted RBP26.59■■□□□ 1.85
SHANK2-220ENST00000608988 TYRO3Q06418 890 aa26.59■■□□□ 1.85
SHANK2-220ENST00000608988 PRPF40BQ6NWY9 871 aaKnown RBP26.59■■□□□ 1.85
SHANK2-220ENST00000608988 VPS37CA5D8V6 355 aaPredicted RBP26.58■■□□□ 1.85
SHANK2-220ENST00000608988 PLCB2Q00722 1185 aa26.58■■□□□ 1.85
SHANK2-220ENST00000608988 PTH1RQ03431 593 aa26.58■■□□□ 1.85
SHANK2-220ENST00000608988 RBM43Q6ZSC3 357 aaKnown RBP26.58■■□□□ 1.85
SHANK2-220ENST00000608988 ANKARQ7Z5J8 1434 aa26.58■■□□□ 1.84
SHANK2-220ENST00000608988 RIOK3O14730 519 aaKnown RBP26.57■■□□□ 1.84
SHANK2-220ENST00000608988 ST3GAL1Q11201 340 aa26.57■■□□□ 1.84
SHANK2-220ENST00000608988 OS9Q13438 667 aaPredicted RBP26.57■■□□□ 1.84
SHANK2-220ENST00000608988 ME3Q16798 604 aa26.57■■□□□ 1.84
SHANK2-220ENST00000608988 PPP4R3BQ5MIZ7 849 aa26.57■■□□□ 1.84
SHANK2-220ENST00000608988 LARP1BQ659C4 914 aaKnown RBP26.57■■□□□ 1.84
SHANK2-220ENST00000608988 MRVI1Q9Y6F6 885 aa26.57■■□□□ 1.84
SHANK2-220ENST00000608988 ALDH1L1O75891 902 aa26.57■■□□□ 1.84
SHANK2-220ENST00000608988 NBPF7P0C2Y1 421 aaPredicted RBP26.57■■□□□ 1.84
SHANK2-220ENST00000608988 NGDNQ8NEJ9 315 aaKnown RBP26.57■■□□□ 1.84
SHANK2-220ENST00000608988 MLECQ14165 292 aa26.56■■□□□ 1.84
SHANK2-220ENST00000608988 ADCK5Q3MIX3 580 aa26.56■■□□□ 1.84
SHANK2-220ENST00000608988 TTC6Q86TZ1 520 aa26.56■■□□□ 1.84
SHANK2-220ENST00000608988 NPHP3Q7Z494 1330 aa26.56■■□□□ 1.84
SHANK2-220ENST00000608988 MARF1Q9Y4F3 1742 aaKnown RBP26.56■■□□□ 1.84
SHANK2-220ENST00000608988 CREB3L3Q68CJ9 461 aa26.55■■□□□ 1.84
SHANK2-220ENST00000608988 MAP4K1Q92918 833 aa26.55■■□□□ 1.84
SHANK2-220ENST00000608988 FEZ1Q99689 392 aa26.55■■□□□ 1.84
SHANK2-220ENST00000608988 CPA1P15085 419 aa26.55■■□□□ 1.84
SHANK2-220ENST00000608988 EIF4A1P60842 406 aaKnown RBP26.55■■□□□ 1.84
SHANK2-220ENST00000608988 RNF20Q5VTR2 975 aa26.55■■□□□ 1.84
SHANK2-220ENST00000608988 IFIT2P09913 472 aaKnown RBP26.54■■□□□ 1.84
SHANK2-220ENST00000608988 TDRD7Q8NHU6 1098 aaKnown RBP26.54■■□□□ 1.84
SHANK2-220ENST00000608988 LARP6Q9BRS8 491 aaKnown RBP26.54■■□□□ 1.84
SHANK2-220ENST00000608988 RBM8AQ9Y5S9 174 aaKnown RBP26.54■■□□□ 1.84
SHANK2-220ENST00000608988 GIGYF1O75420 1035 aaPredicted RBP26.53■■□□□ 1.84
SHANK2-220ENST00000608988 TSC1Q92574 1164 aa26.53■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms