RNA–Protein interactions for RNA: ENST00000607923.5

CTCFL-213, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 2,964 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-213ENST00000607923 TLR7Q9NYK1 1049 aaKnown RBP16.6■□□□□ 0.25
CTCFL-213ENST00000607923 NDUFB9Q9Y6M9 179 aa16.6■□□□□ 0.25
CTCFL-213ENST00000607923 PXDNQ92626 1479 aa16.6■□□□□ 0.25
CTCFL-213ENST00000607923 FAM227BQ96M60 508 aa16.6■□□□□ 0.25
CTCFL-213ENST00000607923 BICC1Q9H694 974 aaKnown RBP16.6■□□□□ 0.25
CTCFL-213ENST00000607923 BABAM1Q9NWV8 329 aa16.6■□□□□ 0.25
CTCFL-213ENST00000607923 RGPD2P0DJD1 1756 aa16.6■□□□□ 0.25
CTCFL-213ENST00000607923 COL9A3Q14050 684 aaPredicted RBP16.59■□□□□ 0.25
CTCFL-213ENST00000607923 LRSAM1Q6UWE0 723 aa16.59■□□□□ 0.25
CTCFL-213ENST00000607923 RUFY3Q7L099 469 aa16.59■□□□□ 0.25
CTCFL-213ENST00000607923 NECAB1Q8N987 351 aa16.59■□□□□ 0.25
CTCFL-213ENST00000607923 KSR2Q6VAB6 950 aa16.59■□□□□ 0.25
CTCFL-213ENST00000607923 CABLES1Q8TDN4 633 aa16.59■□□□□ 0.25
CTCFL-213ENST00000607923 EDC3Q96F86 508 aaKnown RBP16.59■□□□□ 0.25
CTCFL-213ENST00000607923 PPP1R9BQ96SB3 815 aa16.59■□□□□ 0.25
CTCFL-213ENST00000607923 CHMP3Q9Y3E7 222 aa16.59■□□□□ 0.25
CTCFL-213ENST00000607923 FER1L4A9Z1Z3 1794 aa16.59■□□□□ 0.25
CTCFL-213ENST00000607923 LTN1O94822 1766 aa16.59■□□□□ 0.25
CTCFL-213ENST00000607923 GLRX3O76003 335 aaKnown RBP16.59■□□□□ 0.25
CTCFL-213ENST00000607923 PLCB2Q00722 1185 aa16.58■□□□□ 0.24
CTCFL-213ENST00000607923 ECHDC1Q9NTX5 307 aa16.58■□□□□ 0.24
CTCFL-213ENST00000607923 SMC3Q9UQE7 1217 aa16.58■□□□□ 0.24
CTCFL-213ENST00000607923 CSB-PGBD3P0DP91 1061 aa16.58■□□□□ 0.24
CTCFL-213ENST00000607923 G3BP1Q13283 466 aaKnown RBP eCLIP16.58■□□□□ 0.24
CTCFL-213ENST00000607923 HSP90AB4PQ58FF6 505 aa16.58■□□□□ 0.24
CTCFL-213ENST00000607923 ARHGEF25Q86VW2 580 aa16.58■□□□□ 0.24
CTCFL-213ENST00000607923 VPS37CA5D8V6 355 aaPredicted RBP16.57■□□□□ 0.24
CTCFL-213ENST00000607923 ZSCAN30Q86W11 494 aa16.57■□□□□ 0.24
CTCFL-213ENST00000607923 LRRC37A3O60309 1634 aa16.57■□□□□ 0.24
CTCFL-213ENST00000607923 KRT28Q7Z3Y7 464 aa16.57■□□□□ 0.24
CTCFL-213ENST00000607923 NFATC2IPQ8NCF5 419 aa16.57■□□□□ 0.24
CTCFL-213ENST00000607923 EAF2Q96CJ1 260 aaPredicted RBP16.57■□□□□ 0.24
CTCFL-213ENST00000607923 INTS4Q96HW7 963 aaKnown RBP16.57■□□□□ 0.24
CTCFL-213ENST00000607923 WDR33Q9C0J8 1336 aaKnown RBP16.57■□□□□ 0.24
CTCFL-213ENST00000607923 MARF1Q9Y4F3 1742 aaKnown RBP16.56■□□□□ 0.24
CTCFL-213ENST00000607923 AOX1Q06278 1338 aa16.56■□□□□ 0.24
CTCFL-213ENST00000607923 GRM8O00222 908 aa16.56■□□□□ 0.24
CTCFL-213ENST00000607923 MBD3O95983 291 aa16.56■□□□□ 0.24
CTCFL-213ENST00000607923 PTMAP06454 111 aaKnown RBP16.56■□□□□ 0.24
CTCFL-213ENST00000607923 CHRNA2Q15822 529 aa16.56■□□□□ 0.24
CTCFL-213ENST00000607923 AMOTQ4VCS5 1084 aa16.56■□□□□ 0.24
CTCFL-213ENST00000607923 MYD88Q99836 296 aa16.56■□□□□ 0.24
CTCFL-213ENST00000607923 PDRG1Q9NUG6 133 aa16.56■□□□□ 0.24
CTCFL-213ENST00000607923 SYT1P21579 422 aa16.56■□□□□ 0.24
CTCFL-213ENST00000607923 PROSER2Q86WR7 435 aaPredicted RBP16.56■□□□□ 0.24
CTCFL-213ENST00000607923 LIMCH1Q9UPQ0 1083 aa16.56■□□□□ 0.24
CTCFL-213ENST00000607923 SASH1O94885 1247 aa16.55■□□□□ 0.24
CTCFL-213ENST00000607923 FERMT3Q86UX7 667 aa16.55■□□□□ 0.24
CTCFL-213ENST00000607923 GPATCH3Q96I76 525 aa16.55■□□□□ 0.24
CTCFL-213ENST00000607923 CHGBP05060 677 aa16.55■□□□□ 0.24
CTCFL-213ENST00000607923 STK3Q13188 491 aa16.55■□□□□ 0.24
CTCFL-213ENST00000607923 NMIQ13287 307 aaPredicted RBP16.55■□□□□ 0.24
CTCFL-213ENST00000607923 XAGE3Q8WTP9 111 aa16.55■□□□□ 0.24
CTCFL-213ENST00000607923 KAZALD1Q96I82 304 aa16.55■□□□□ 0.24
CTCFL-213ENST00000607923 FSD1Q9BTV5 496 aa16.55■□□□□ 0.24
CTCFL-213ENST00000607923 TCHHQ07283 1943 aa16.55■□□□□ 0.24
CTCFL-213ENST00000607923 ATP5J2-PTCD1G3V325 749 aa16.54■□□□□ 0.24
CTCFL-213ENST00000607923 STX6O43752 255 aa16.54■□□□□ 0.24
CTCFL-213ENST00000607923 PTCD1O75127 700 aaKnown RBP16.54■□□□□ 0.24
CTCFL-213ENST00000607923 GJB2P29033 226 aa16.54■□□□□ 0.24
CTCFL-213ENST00000607923 COPS6Q7L5N1 327 aa16.54■□□□□ 0.24
CTCFL-213ENST00000607923 RAPGEF4Q8WZA2 1011 aa16.54■□□□□ 0.24
CTCFL-213ENST00000607923 TSPY26PQ9H489 355 aa16.54■□□□□ 0.24
CTCFL-213ENST00000607923 HOXB7P09629 217 aa16.54■□□□□ 0.24
CTCFL-213ENST00000607923 FAM173BQ6P4H8 233 aa16.54■□□□□ 0.24
CTCFL-213ENST00000607923 RUFY2Q8WXA3 655 aa16.54■□□□□ 0.24
CTCFL-213ENST00000607923 TTC14Q96N46 770 aa16.54■□□□□ 0.24
CTCFL-213ENST00000607923 PXDNLA1KZ92 1463 aa16.54■□□□□ 0.24
CTCFL-213ENST00000607923 RPAP1Q9BWH6 1393 aaPredicted RBP16.54■□□□□ 0.24
CTCFL-213ENST00000607923 RBM8AQ9Y5S9 174 aaKnown RBP16.53■□□□□ 0.24
CTCFL-213ENST00000607923 TAF6LQ9Y6J9 622 aa16.53■□□□□ 0.24
CTCFL-213ENST00000607923 EPHA10Q5JZY3 1008 aa16.53■□□□□ 0.24
CTCFL-213ENST00000607923 DDX58O95786 925 aaKnown RBP16.53■□□□□ 0.24
CTCFL-213ENST00000607923 ZSCAN22P10073 491 aaPredicted RBP16.53■□□□□ 0.24
CTCFL-213ENST00000607923 IGKV5-2P06315 115 aa16.52■□□□□ 0.24
CTCFL-213ENST00000607923 DNM1Q05193 864 aaKnown RBP16.52■□□□□ 0.24
CTCFL-213ENST00000607923 LINS1Q8NG48 757 aa16.52■□□□□ 0.24
CTCFL-213ENST00000607923 HYPKQ9NX55 129 aa16.52■□□□□ 0.24
CTCFL-213ENST00000607923 CYP46A1Q9Y6A2 500 aa16.52■□□□□ 0.24
CTCFL-213ENST00000607923 CACNA1FO60840 1977 aa16.52■□□□□ 0.24
CTCFL-213ENST00000607923 A0A0D9SFI3 127 aa16.52■□□□□ 0.23
CTCFL-213ENST00000607923 ZNF830Q96NB3 372 aaPredicted RBP16.52■□□□□ 0.23
CTCFL-213ENST00000607923 R3HCC1Q9Y3T6 440 aaKnown RBP16.52■□□□□ 0.23
CTCFL-213ENST00000607923 USP16Q9Y5T5 823 aa16.52■□□□□ 0.23
CTCFL-213ENST00000607923 TTC41PQ6P2S7 1318 aa16.52■□□□□ 0.23
CTCFL-213ENST00000607923 ALDH1L1O75891 902 aa16.51■□□□□ 0.23
CTCFL-213ENST00000607923 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.51■□□□□ 0.23
CTCFL-213ENST00000607923 ZNF790Q6PG37 636 aa16.51■□□□□ 0.23
CTCFL-213ENST00000607923 SYAP1Q96A49 352 aaPredicted RBP16.51■□□□□ 0.23
CTCFL-213ENST00000607923 ZNF496Q96IT1 587 aaPredicted RBP16.51■□□□□ 0.23
CTCFL-213ENST00000607923 NFAT5O94916 1531 aa16.51■□□□□ 0.23
CTCFL-213ENST00000607923 ZKSCAN1P17029 563 aaPredicted RBP16.5■□□□□ 0.23
CTCFL-213ENST00000607923 NEXNQ0ZGT2 675 aa16.5■□□□□ 0.23
CTCFL-213ENST00000607923 ME3Q16798 604 aa16.5■□□□□ 0.23
CTCFL-213ENST00000607923 DNAJC2Q99543 621 aaKnown RBP16.5■□□□□ 0.23
CTCFL-213ENST00000607923 DDX21Q9NR30 783 aaKnown RBP eCLIP16.5■□□□□ 0.23
CTCFL-213ENST00000607923 PODXL2Q9NZ53 605 aa16.5■□□□□ 0.23
CTCFL-213ENST00000607923 CREB3L3Q68CJ9 461 aa16.5■□□□□ 0.23
CTCFL-213ENST00000607923 EVI5LQ96CN4 794 aa16.5■□□□□ 0.23
CTCFL-213ENST00000607923 TUBGCP6Q96RT7 1819 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms