RNA–Protein interactions for RNA: ENST00000606715.3

SHANK2-219, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

Gene SHANK2, Length 5,738 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-219ENST00000606715 NBPF4Q96M43 638 aa12.88□□□□□ -0.35
SHANK2-219ENST00000606715 NAPBQ9H115 298 aa12.88□□□□□ -0.35
SHANK2-219ENST00000606715 IL1RAPL2Q9NP60 686 aa12.88□□□□□ -0.35
SHANK2-219ENST00000606715 CETN2P41208 172 aa12.87□□□□□ -0.35
SHANK2-219ENST00000606715 TTF1Q15361 905 aaPredicted RBP12.87□□□□□ -0.35
SHANK2-219ENST00000606715 POLR3AO14802 1390 aaPredicted RBP12.87□□□□□ -0.35
SHANK2-219ENST00000606715 TMEM2Q9UHN6 1383 aa12.87□□□□□ -0.35
SHANK2-219ENST00000606715 RANBP6O60518 1105 aaKnown RBP12.87□□□□□ -0.35
SHANK2-219ENST00000606715 PRKCSHP14314 528 aaPredicted RBP12.87□□□□□ -0.35
SHANK2-219ENST00000606715 OGFOD1Q8N543 542 aa12.87□□□□□ -0.35
SHANK2-219ENST00000606715 CTCFLQ8NI51 663 aaPredicted RBP12.87□□□□□ -0.35
SHANK2-219ENST00000606715 ANAPC15P60006 121 aa12.87□□□□□ -0.35
SHANK2-219ENST00000606715 DNAJC5Q9H3Z4 198 aa12.87□□□□□ -0.35
SHANK2-219ENST00000606715 ARHGEF5Q12774 1597 aa12.87□□□□□ -0.35
SHANK2-219ENST00000606715 CCP110O43303 1012 aa12.87□□□□□ -0.35
SHANK2-219ENST00000606715 FIBPO43427 364 aa12.87□□□□□ -0.35
SHANK2-219ENST00000606715 EZRP15311 586 aaKnown RBP12.87□□□□□ -0.35
SHANK2-219ENST00000606715 SIRT1Q96EB6 747 aa12.87□□□□□ -0.35
SHANK2-219ENST00000606715 LMOD1P29536 600 aaPredicted RBP12.86□□□□□ -0.35
SHANK2-219ENST00000606715 UBA5Q9GZZ9 404 aa12.86□□□□□ -0.35
SHANK2-219ENST00000606715 CEP131Q9UPN4 1083 aa12.86□□□□□ -0.35
SHANK2-219ENST00000606715 CCDC184Q52MB2 194 aa12.86□□□□□ -0.35
SHANK2-219ENST00000606715 WDR33Q9C0J8 1336 aaKnown RBP12.86□□□□□ -0.35
SHANK2-219ENST00000606715 SPTY2D1Q68D10 685 aaPredicted RBP12.86□□□□□ -0.35
SHANK2-219ENST00000606715 BAG3O95817 575 aa12.86□□□□□ -0.35
SHANK2-219ENST00000606715 RNF41Q9H4P4 317 aaPredicted RBP12.86□□□□□ -0.35
SHANK2-219ENST00000606715 WWC3Q9ULE0 1092 aa12.86□□□□□ -0.35
SHANK2-219ENST00000606715 GCP02774 474 aa12.85□□□□□ -0.35
SHANK2-219ENST00000606715 HMGB1P09429 215 aaKnown RBP12.85□□□□□ -0.35
SHANK2-219ENST00000606715 ANKRD13DQ6ZTN6 518 aa12.85□□□□□ -0.35
SHANK2-219ENST00000606715 IQCA1Q86XH1 822 aa12.85□□□□□ -0.35
SHANK2-219ENST00000606715 CWC27Q6UX04 472 aaKnown RBP12.85□□□□□ -0.35
SHANK2-219ENST00000606715 JDP2Q8WYK2 163 aa12.85□□□□□ -0.35
SHANK2-219ENST00000606715 EXOC6BQ9Y2D4 811 aa12.85□□□□□ -0.35
SHANK2-219ENST00000606715 CCDC196A0A1B0GTZ2 297 aa12.85□□□□□ -0.35
SHANK2-219ENST00000606715 ALDH1L1O75891 902 aa12.85□□□□□ -0.35
SHANK2-219ENST00000606715 MAP7D2Q96T17 732 aa12.85□□□□□ -0.35
SHANK2-219ENST00000606715 CCDC152Q4G0S7 254 aa12.85□□□□□ -0.35
SHANK2-219ENST00000606715 MBIPQ9NS73 344 aa12.85□□□□□ -0.35
SHANK2-219ENST00000606715 TFCP2L1Q9NZI6 479 aa12.85□□□□□ -0.35
SHANK2-219ENST00000606715 MAP3K2Q9Y2U5 619 aa12.85□□□□□ -0.35
SHANK2-219ENST00000606715 DHX8Q14562 1220 aaKnown RBP12.85□□□□□ -0.35
SHANK2-219ENST00000606715 DCAF5Q96JK2 942 aa12.85□□□□□ -0.35
SHANK2-219ENST00000606715 RAB34Q9BZG1 259 aa12.85□□□□□ -0.35
SHANK2-219ENST00000606715 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.84□□□□□ -0.35
SHANK2-219ENST00000606715 GBP2P32456 591 aaPredicted RBP12.84□□□□□ -0.35
SHANK2-219ENST00000606715 ENOX2Q16206 610 aaKnown RBP12.84□□□□□ -0.35
SHANK2-219ENST00000606715 CCDC191Q8NCU4 936 aa12.84□□□□□ -0.35
SHANK2-219ENST00000606715 IP6K1Q92551 441 aa12.84□□□□□ -0.35
SHANK2-219ENST00000606715 ZBTB3Q9H5J0 574 aa12.84□□□□□ -0.35
SHANK2-219ENST00000606715 PDRG1Q9NUG6 133 aa12.84□□□□□ -0.35
SHANK2-219ENST00000606715 PARP3Q9Y6F1 533 aa12.84□□□□□ -0.35
SHANK2-219ENST00000606715 PCDH11XQ9BZA7 1347 aa12.84□□□□□ -0.35
SHANK2-219ENST00000606715 PCDH11YQ9BZA8 1340 aa12.84□□□□□ -0.35
SHANK2-219ENST00000606715 TMEM266Q2M3C6 531 aa12.84□□□□□ -0.35
SHANK2-219ENST00000606715 ACSBG1Q96GR2 724 aa12.84□□□□□ -0.35
SHANK2-219ENST00000606715 TRMT1LQ7Z2T5 733 aaKnown RBP12.84□□□□□ -0.35
SHANK2-219ENST00000606715 BAG4O95429 457 aaKnown RBP12.83□□□□□ -0.35
SHANK2-219ENST00000606715 UQCRFS1P1P0C7P4 283 aa12.83□□□□□ -0.35
SHANK2-219ENST00000606715 PLEKHH1Q9ULM0 1364 aa12.83□□□□□ -0.35
SHANK2-219ENST00000606715 EIF4A2Q14240 407 aaKnown RBP12.83□□□□□ -0.36
SHANK2-219ENST00000606715 LARP1BQ659C4 914 aaKnown RBP12.83□□□□□ -0.36
SHANK2-219ENST00000606715 NYXQ9GZU5 481 aa12.83□□□□□ -0.36
SHANK2-219ENST00000606715 ATP6V1AP38606 617 aa12.83□□□□□ -0.36
SHANK2-219ENST00000606715 LDHAL6AQ6ZMR3 332 aa12.83□□□□□ -0.36
SHANK2-219ENST00000606715 SETDB2Q96T68 719 aa12.83□□□□□ -0.36
SHANK2-219ENST00000606715 LRRFIP2Q9Y608 721 aaKnown RBP12.83□□□□□ -0.36
SHANK2-219ENST00000606715 GOLGA6L10A6NI86 522 aa12.83□□□□□ -0.36
SHANK2-219ENST00000606715 JAKMIP1Q96N16 626 aaKnown RBP12.83□□□□□ -0.36
SHANK2-219ENST00000606715 BABAM1Q9NWV8 329 aa12.83□□□□□ -0.36
SHANK2-219ENST00000606715 POLKQ9UBT6 870 aa12.83□□□□□ -0.36
SHANK2-219ENST00000606715 SAMM50Q9Y512 469 aa12.83□□□□□ -0.36
SHANK2-219ENST00000606715 K7ELQ4 463 aaPredicted RBP12.83□□□□□ -0.36
SHANK2-219ENST00000606715 JAKMIP3Q5VZ66 844 aa12.83□□□□□ -0.36
SHANK2-219ENST00000606715 CCDC39Q9UFE4 941 aa12.83□□□□□ -0.36
SHANK2-219ENST00000606715 KDM5DQ9BY66 1539 aa12.83□□□□□ -0.36
SHANK2-219ENST00000606715 PIK3C2GO75747 1445 aa12.82□□□□□ -0.36
SHANK2-219ENST00000606715 CCDC112Q8NEF3 446 aa12.82□□□□□ -0.36
SHANK2-219ENST00000606715 FERMT2Q96AC1 680 aa12.82□□□□□ -0.36
SHANK2-219ENST00000606715 TSG101Q99816 390 aa12.82□□□□□ -0.36
SHANK2-219ENST00000606715 EIF5P55010 431 aaKnown RBP12.82□□□□□ -0.36
SHANK2-219ENST00000606715 SLAIN2Q9P270 581 aa12.82□□□□□ -0.36
SHANK2-219ENST00000606715 ECM2O94769 699 aaPredicted RBP12.82□□□□□ -0.36
SHANK2-219ENST00000606715 NUTM1Q86Y26 1132 aa12.82□□□□□ -0.36
SHANK2-219ENST00000606715 COMMD10Q9Y6G5 202 aa12.82□□□□□ -0.36
SHANK2-219ENST00000606715 EPB41L2O43491 1005 aaKnown RBP12.82□□□□□ -0.36
SHANK2-219ENST00000606715 KRT85P78386 507 aa12.82□□□□□ -0.36
SHANK2-219ENST00000606715 RBM26Q5T8P6 1007 aaKnown RBP12.82□□□□□ -0.36
SHANK2-219ENST00000606715 CIZ1Q9ULV3 898 aaPredicted RBP12.82□□□□□ -0.36
SHANK2-219ENST00000606715 MLH3Q9UHC1 1453 aa12.82□□□□□ -0.36
SHANK2-219ENST00000606715 PI4KAP2A4QPH2 592 aa12.81□□□□□ -0.36
SHANK2-219ENST00000606715 GSTO1P78417 241 aa12.81□□□□□ -0.36
SHANK2-219ENST00000606715 PI4KAP1Q8N8J0 262 aa12.81□□□□□ -0.36
SHANK2-219ENST00000606715 RNF214Q8ND24 703 aa12.81□□□□□ -0.36
SHANK2-219ENST00000606715 STK32BQ9NY57 414 aa12.81□□□□□ -0.36
SHANK2-219ENST00000606715 CFAP45Q9UL16 551 aa12.81□□□□□ -0.36
SHANK2-219ENST00000606715 EDC4Q6P2E9 1401 aaKnown RBP12.81□□□□□ -0.36
SHANK2-219ENST00000606715 ECHDC1Q9NTX5 307 aa12.81□□□□□ -0.36
SHANK2-219ENST00000606715 EVI5LQ96CN4 794 aa12.81□□□□□ -0.36
SHANK2-219ENST00000606715 PABPN1LA6NDY0 278 aaKnown RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms