RNA–Protein interactions for RNA: ENST00000602955.1

AC004542.1-201, humanhuman

TSL 3 BASIC

Gene AC004542.1, Length 264 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004542.1-201ENST00000602955 EDEM1Q92611 657 aa6.5□□□□□ -1.37
AC004542.1-201ENST00000602955 SETDB2Q96T68 719 aa6.5□□□□□ -1.37
AC004542.1-201ENST00000602955 KLF16Q9BXK1 252 aaPredicted RBP6.5□□□□□ -1.37
AC004542.1-201ENST00000602955 RNF19AQ9NV58 838 aa6.5□□□□□ -1.37
AC004542.1-201ENST00000602955 MEN1O00255 615 aa6.49□□□□□ -1.37
AC004542.1-201ENST00000602955 GNA15P30679 374 aa6.49□□□□□ -1.37
AC004542.1-201ENST00000602955 C9orf131Q5VYM1 1079 aa6.49□□□□□ -1.37
AC004542.1-201ENST00000602955 PIK3R5Q8WYR1 880 aa6.49□□□□□ -1.37
AC004542.1-201ENST00000602955 ZSCAN10Q96SZ4 725 aaPredicted RBP6.49□□□□□ -1.37
AC004542.1-201ENST00000602955 VTI1BQ9UEU0 232 aa6.49□□□□□ -1.37
AC004542.1-201ENST00000602955 PARP3Q9Y6F1 533 aa6.49□□□□□ -1.37
AC004542.1-201ENST00000602955 WASF2Q9Y6W5 498 aa6.49□□□□□ -1.37
AC004542.1-201ENST00000602955 FANCCQ00597 558 aa6.48□□□□□ -1.37
AC004542.1-201ENST00000602955 SPRYD7Q5W111 196 aa6.48□□□□□ -1.37
AC004542.1-201ENST00000602955 NT5DC4Q86YG4 428 aa6.48□□□□□ -1.37
AC004542.1-201ENST00000602955 RHBDD1Q8TEB9 315 aa6.48□□□□□ -1.37
AC004542.1-201ENST00000602955 ITPKCQ96DU7 683 aa6.48□□□□□ -1.37
AC004542.1-201ENST00000602955 AGBL1Q96MI9 1066 aa6.48□□□□□ -1.37
AC004542.1-201ENST00000602955 FRMD6Q96NE9 622 aa6.48□□□□□ -1.37
AC004542.1-201ENST00000602955 CFHR5Q9BXR6 569 aa6.48□□□□□ -1.37
AC004542.1-201ENST00000602955 ZIC2O95409 532 aaPredicted RBP6.47□□□□□ -1.37
AC004542.1-201ENST00000602955 RPLP1P05386 114 aaKnown RBP6.47□□□□□ -1.37
AC004542.1-201ENST00000602955 GPC1P35052 558 aa6.47□□□□□ -1.37
AC004542.1-201ENST00000602955 TMEM214Q6NUQ4 689 aaKnown RBP6.47□□□□□ -1.37
AC004542.1-201ENST00000602955 TREML1Q86YW5 311 aa6.47□□□□□ -1.37
AC004542.1-201ENST00000602955 GPR152Q8TDT2 470 aa6.47□□□□□ -1.37
AC004542.1-201ENST00000602955 UBXN4Q92575 508 aa6.47□□□□□ -1.37
AC004542.1-201ENST00000602955 RNF34Q969K3 372 aa6.47□□□□□ -1.37
AC004542.1-201ENST00000602955 RNF166Q96A37 237 aaPredicted RBP6.47□□□□□ -1.37
AC004542.1-201ENST00000602955 CSRNP1Q96S65 589 aa6.47□□□□□ -1.37
AC004542.1-201ENST00000602955 FAM13BQ9NYF5 915 aa6.47□□□□□ -1.37
AC004542.1-201ENST00000602955 EIF1AYO14602 144 aaKnown RBP6.46□□□□□ -1.38
AC004542.1-201ENST00000602955 NEFLP07196 543 aa6.46□□□□□ -1.38
AC004542.1-201ENST00000602955 GTF2E1P29083 439 aaPredicted RBP6.46□□□□□ -1.38
AC004542.1-201ENST00000602955 ZNF76P36508 570 aa6.46□□□□□ -1.38
AC004542.1-201ENST00000602955 TXLNAP40222 546 aa6.46□□□□□ -1.38
AC004542.1-201ENST00000602955 RELBQ01201 579 aa6.46□□□□□ -1.38
AC004542.1-201ENST00000602955 HIF1AQ16665 826 aa6.46□□□□□ -1.38
AC004542.1-201ENST00000602955 GNASQ5JWF2 1037 aa6.46□□□□□ -1.38
AC004542.1-201ENST00000602955 POTEGQ6S5H5 508 aa6.46□□□□□ -1.38
AC004542.1-201ENST00000602955 SNIP1Q8TAD8 396 aaKnown RBP6.46□□□□□ -1.38
AC004542.1-201ENST00000602955 C7orf43Q8WVR3 580 aa6.46□□□□□ -1.38
AC004542.1-201ENST00000602955 NUDT16Q96DE0 195 aaKnown RBP6.46□□□□□ -1.38
AC004542.1-201ENST00000602955 GRIP2Q9C0E4 1043 aa6.46□□□□□ -1.38
AC004542.1-201ENST00000602955 TGIF2Q9GZN2 237 aa6.46□□□□□ -1.38
AC004542.1-201ENST00000602955 DNAJC25Q9H1X3 360 aa6.46□□□□□ -1.38
AC004542.1-201ENST00000602955 ZFAND3Q9H8U3 227 aa6.46□□□□□ -1.38
AC004542.1-201ENST00000602955 BCS1LQ9Y276 419 aa6.46□□□□□ -1.38
AC004542.1-201ENST00000602955 MICAL2O94851 1124 aa6.45□□□□□ -1.38
AC004542.1-201ENST00000602955 WDR4P57081 412 aaKnown RBP6.45□□□□□ -1.38
AC004542.1-201ENST00000602955 ORC1Q13415 861 aa6.45□□□□□ -1.38
AC004542.1-201ENST00000602955 ZNF697Q5TEC3 545 aa6.45□□□□□ -1.38
AC004542.1-201ENST00000602955 CRELD1Q96HD1 420 aa6.45□□□□□ -1.38
AC004542.1-201ENST00000602955 GGNBP2Q9H3C7 697 aa6.45□□□□□ -1.38
AC004542.1-201ENST00000602955 PKD2L1Q9P0L9 805 aa6.45□□□□□ -1.38
AC004542.1-201ENST00000602955 GPC6Q9Y625 555 aaPredicted RBP6.45□□□□□ -1.38
AC004542.1-201ENST00000602955 AK5Q9Y6K8 562 aa6.45□□□□□ -1.38
AC004542.1-201ENST00000602955 TGFBR3LH3BV60 316 aa6.44□□□□□ -1.38
AC004542.1-201ENST00000602955 TIMP2P16035 220 aa6.44□□□□□ -1.38
AC004542.1-201ENST00000602955 RNF144AP50876 292 aaPredicted RBP6.44□□□□□ -1.38
AC004542.1-201ENST00000602955 IFFO2Q5TF58 517 aa6.44□□□□□ -1.38
AC004542.1-201ENST00000602955 IER5Q5VY09 327 aa6.44□□□□□ -1.38
AC004542.1-201ENST00000602955 ZNF598Q86UK7 904 aaKnown RBP6.44□□□□□ -1.38
AC004542.1-201ENST00000602955 MEIOBQ8N635 442 aa6.44□□□□□ -1.38
AC004542.1-201ENST00000602955 TTC16Q8NEE8 873 aa6.44□□□□□ -1.38
AC004542.1-201ENST00000602955 TINF2Q9BSI4 451 aa6.44□□□□□ -1.38
AC004542.1-201ENST00000602955 CCSER2Q9H7U1 834 aa6.44□□□□□ -1.38
AC004542.1-201ENST00000602955 ZNF395Q9H8N7 513 aaPredicted RBP6.44□□□□□ -1.38
AC004542.1-201ENST00000602955 ZDHHC3Q9NYG2 299 aa6.44□□□□□ -1.38
AC004542.1-201ENST00000602955 OPLAHO14841 1288 aa6.43□□□□□ -1.38
AC004542.1-201ENST00000602955 PLA2G4AP47712 749 aa6.43□□□□□ -1.38
AC004542.1-201ENST00000602955 NBPF1Q3BBV0 1214 aa6.43□□□□□ -1.38
AC004542.1-201ENST00000602955 C8orf34Q49A92 452 aa6.43□□□□□ -1.38
AC004542.1-201ENST00000602955 C4orf17Q53FE4 359 aa6.43□□□□□ -1.38
AC004542.1-201ENST00000602955 SLC27A3Q5K4L6 730 aa6.43□□□□□ -1.38
AC004542.1-201ENST00000602955 SLC43A3Q8NBI5 491 aa6.43□□□□□ -1.38
AC004542.1-201ENST00000602955 RHPN1Q8TCX5 695 aa6.43□□□□□ -1.38
AC004542.1-201ENST00000602955 DMGDHQ9UI17 866 aaKnown RBP6.43□□□□□ -1.38
AC004542.1-201ENST00000602955 SPG7Q9UQ90 795 aa6.43□□□□□ -1.38
AC004542.1-201ENST00000602955 SPATA31C2B4DYI2 1134 aa6.42□□□□□ -1.38
AC004542.1-201ENST00000602955 CTSHP09668 335 aa6.42□□□□□ -1.38
AC004542.1-201ENST00000602955 FOXC1Q12948 553 aa6.42□□□□□ -1.38
AC004542.1-201ENST00000602955 XKR5Q6UX68 686 aa6.42□□□□□ -1.38
AC004542.1-201ENST00000602955 SUSD3Q96L08 255 aa6.42□□□□□ -1.38
AC004542.1-201ENST00000602955 PPP1R1BQ9UD71 204 aaPredicted RBP6.42□□□□□ -1.38
AC004542.1-201ENST00000602955 J3QL48 77 aa6.41□□□□□ -1.38
AC004542.1-201ENST00000602955 GIPC1O14908 333 aa6.41□□□□□ -1.38
AC004542.1-201ENST00000602955 CPNE3O75131 537 aaKnown RBP6.41□□□□□ -1.38
AC004542.1-201ENST00000602955 TATP17735 454 aaPredicted RBP6.41□□□□□ -1.38
AC004542.1-201ENST00000602955 EIF4BP23588 611 aaKnown RBP6.41□□□□□ -1.38
AC004542.1-201ENST00000602955 FAM177A1Q8N128 213 aaPredicted RBP6.41□□□□□ -1.38
AC004542.1-201ENST00000602955 TSEN34Q9BSV6 310 aaKnown RBP6.41□□□□□ -1.38
AC004542.1-201ENST00000602955 NLRP2Q9NX02 1062 aa6.41□□□□□ -1.38
AC004542.1-201ENST00000602955 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.41□□□□□ -1.38
AC004542.1-201ENST00000602955 TTC24A2A3L6 582 aaPredicted RBP6.4□□□□□ -1.38
AC004542.1-201ENST00000602955 A6NHS1 94 aa6.4□□□□□ -1.38
AC004542.1-201ENST00000602955 SPINT1O43278 529 aa6.4□□□□□ -1.38
AC004542.1-201ENST00000602955 TNFRSF21O75509 655 aa6.4□□□□□ -1.38
AC004542.1-201ENST00000602955 INPP5BP32019 993 aa6.4□□□□□ -1.38
AC004542.1-201ENST00000602955 IDH3AP50213 366 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms